HHsearch 1.5 NAME c7oqyF_ FAM FILE c7oqyF_ COM /bmm/www/servers/phyre2/HH/hhmake -i c7oqyF_.a3m DATE Sat Aug 28 08:24:49 2021 LENG 109 match states, 109 columns in multiple alignment FILT 56 out of 60 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.1 EVD 0.4131 -0.5432 SEQ >ss_dssp CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCSCHHHHHHHHHHTTTTCCCHHHHHHHHHHCCCSTTTHHHHCCCSSCCCSCHHH HHHHHHHHC >sa_dssp EEEEEEEEEEEDDBDBCCCDECDEDCEEEEDDEECDEDCDDBDEDCECEDECADBBCEDACECCEDDCBCBDBABDBBEDDEDBDECCECEEECEECBDD BBDBBDECD >ss_pred CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHH HHHHHHHHC >ss_conf 9203510552267889999999999521004799999999999871578467999999999559999999999733798899999997630578899899 999998619 >Consensus xxxxxxiieexxitxxeakxlLxxxxxexxxsxxxxktlxYlxxFskxxxexaxelxexLxxxxlxexexaxIxnlxPxtxdExraiixxxxxxxxsxEe lxxILdiik >c7oqyF_ MSYSLKTIEEHFVPYSIAKKYIKELIDTGSSSNLIQKTFDYLNSISRCDEDSASKIMKELEEIVKREDVRAVLASICPTTVEEVRSVLVIDPSTIYSTEQ IQKIIEIIK >UniRef50_A8AB65(3-112:117) Putative uncharacterized protein n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8AB65_IGNH4 E=1e-11 s/c=0.64 id=20% cov=94% -------LEARYISNTEALVMLEKRWKElgpdasKMEYTAITNSVRHLRLVIKCTLDKVRELDEFLKEMGLEEEARVAIENECPTEVDFLKVVLGVVPDL ELSEEEMEQIVEKVR >UniRef50_Q9HIN7(2-101:105) Putative uncharacterized protein Ta1298 n=2 Tax=Thermoplasma RepID=Q9HIN7_THEAC E=0.0006 s/c=0.45 id=16% cov=92% ------TMEKKYISIPEVIDLLSNRE---NLTDLEKENLAYAEKFARIDPKAIKKVREDILSIvDMPEKALVKILDLKPETPGELTAILST-YGVMISDE NLNALTDYLK >UniRef50_A1RX31(3-106:110) DNA-directed RNA polymerase, subunit F n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RX31_THEPD E=3e-11 s/c=0.67 id=21% cov=94% -----RVISEKNLTYAEALEILLKEESSRELTSIERYTLEYLRKFSKVrDAQTARSLVERLMkEFDIPEDVAVQIVNVKPADPQEAK-IFVSHLNKVFTD KDFARIIEIL- >UniRef50_B8D6K2(4-114:124) RNA polymerase Rpb4 n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D6K2_DESK1 E=5e-13 s/c=0.68 id=22% cov=83% ----LKAIEEKQLSNSEAYLILRNIVEKikeetGTVPLLLSRVLEYLKTHHKIPPEKAGELHELLASKGLKDETIVMLMNICPSSIDELRYLMELEEKT- -------------- >UniRef50_D2V4Z3(233-352:413) Predicted protein n=1 Tax=Naegleria gruberi RepID=D2V4Z3_NAEGR E=1e-08 s/c=0.51 id=22% cov=63% ----------------------------------------YFDKQTKVNNQNEESIRNLLKDLGpfsLTRSEKMLVINSPPSSLVEIHSIIENCESR-YS EDQILEILEIIQ >UniRef50_C4V7H2(10-114:118) Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01 RepID=C4V7H2_NOSCE E=4e-08 s/c=0.56 id=19% cov=91% --------DSHPVTLAEVRYLLETVKDRSSVDNrsasykILKQTLNYVEKFCKIEEKSlADDLRSSLFNCGCNEVEIALLGSLFPQSIDEAKMLIPSLSD KDNT--LLTKVIDLL- >UniRef50_Q74ME2(7-102:109) NEQ411 n=1 Tax=Nanoarchaeum equitans RepID=Q74ME2_NANEQ E=2e-06 s/c=0.56 id=25% cov=89% ----MEIIKEEPITNEKAYQILAKQKQ---LSYRAERTKKYLEKIGFIK--NSDEILKQLVDLGIELEKAIMIVNTMPKTNDEVRAILEKD----YTPEI GKKVLEIMK >UniRef50_B6JVP3(24-129:137) DNA-directed RNA polymerase II subunit RPB4 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JVP3_SCHJY E=3e-12 s/c=0.69 id=23% cov=72% ---------------------------EVPMTDVMKKTMEYFNIFARFKTQEATYACERILGNRFHKFERAQLGTLCCEDAEEARTLIPSL-ATKISDES LQGILD--- >UniRef50_B0R508(1-115:119) DNA-directed RNA polymerase subunit F n=11 Tax=Halobacteriaceae RepID=B0R508_HALS3 E=1e-09 s/c=0.56 id=18% cov=99% MTIFKETVETEPLTVSEAKALLSEVEteraldEDRELRFELSRAIEHANRFALLEPAESREFVDELLALDVLDDEAVayKIVDLLPRTRTELRSVFANER -YAMSGDELDEILDVV- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * * 0 * * * * * * * * * 1 0 * * * * * * 1759 0 0 S 2 * * * * * * * * * * * * * * * 987 1013 * * * 2 0 * * * * * * 1759 0 0 Y 3 * * * * * * * 1013 * * * * * * * * * * * 987 3 0 * * * * * * 1759 0 0 S 4 * * * * 1641 * * * * * * * * * * 558 * * * * 4 0 * * * * * * 2219 0 0 L 5 * * * * * * * 3215 2703 2013 2943 * * * * * * 1470 * * 5 0 * * * * * * 3274 0 0 K 6 * * * 1546 * * * * 1275 * * * * 4306 2805 * * * * 4302 6 0 * * * * * * 4159 0 0 T 7 4209 * * * * * * 1206 3546 * * * * * * * 2501 1999 * * 7 0 * * * * * * 4294 0 0 I 8 * * * * * * * 1471 4649 1377 3966 * * * * * * 2734 * * 8 0 * * * * * * 4460 0 0 E 9 * * 3337 581 * 4789 * * 3286 * * * * * * 3415 * * * * 9 0 * * * * * * 4716 0 0 E 10 3943 * * 980 4776 * * * 4135 * * * * * * 2367 3557 * * 4167 10 0 * * * * * * 4716 0 0 H 11 * * 3847 2238 * * 2579 * 1687 * * 4258 * * 2408 * * * * * 11 0 * * * * * * 4727 0 0 F 12 4209 * * * 4473 * * * * 3662 * 4318 1892 4592 * * * * * 1117 12 0 * * * * * * 4727 0 0 V 13 * * * * * * * 1581 * 1924 * * * * * * * 1314 * * 13 0 * * * * * * 4839 0 0 P 14 * * * * * * * * * * * * 2288 4536 * 1547 1287 * * * 14 0 * * * * * * 4839 0 0 Y 15 * * * * * * * 2749 * 2075 4982 2210 * * * 4536 4357 3833 * 2293 15 0 * * * * * * 4839 0 0 S 16 1777 * 4357 4460 * * * * * * * * 2577 4322 * 1765 4085 4536 * * 16 0 * * * * * * 4839 0 0 I 17 * * * 501 * * * 4558 3497 * * * * * * * * 2623 * * 17 0 * * * * * * 4839 0 0 A 18 668 * * * * * * * * * * * * * * * 4805 1578 * * 18 0 * * * * * * 4839 0 0 K 19 5051 * * * * * * 4394 889 2872 * * * * 3552 * * * * 2641 19 0 * * * * * * 4909 0 0 K 20 4708 * 3672 1395 * * * * 2058 4796 * * * 4477 4762 * * 4103 * 3521 20 0 * * * * * * 4909 0 0 Y 21 4592 * * * * * * 1346 * 1239 4077 * * * * * * * * 3606 21 0 * * * * * * 4965 0 0 I 22 * * * * * * * 4592 * 221 3318 * * * * * * * * * 22 0 * * * * * * 4965 0 0 K 23 4573 * * 1172 * 4768 * * 2839 4938 4977 * * * 3792 3354 4796 * * 3892 23 0 * * * * * * 5034 0 0 E 24 * * 4023 2007 * * 4615 * 1514 * * 2718 * 4731 3957 * 4483 * * * 24 54 * 4768 * * * * 5034 0 0 L 25 3972 * 4556 3932 3980 * 4661 2766 4887 4694 * * * 4530 1508 * * 3172 * * 25 0 * * * * 0 * 4994 0 1000 I 26 4118 * * 2738 * 5274 * 3419 2683 * * 5020 * * 2803 4845 4796 2211 4146 * 26 157 3934 4723 2508 279 * * 5034 1575 0 D 27 4288 * 2935 1913 * * * * 2385 * * * * 2614 2905 5038 4893 * * * 27 120 4597 4703 0 * * 0 5164 1000 1000 T 28 * * 2989 1315 * * * 5463 2844 4996 * * 4874 * 4770 2485 5090 * * * 28 230 2762 * 2459 290 * 0 5193 2516 1683 G 29 3849 * * 4874 * 1800 4298 * 3596 5315 * 5026 * 5239 2177 3305 * 3811 * * 29 41 5158 * 2000 415 930 1073 5193 1000 1683 S 30 * * 4208 1501 * * * * * 5266 4005 3442 3343 3424 5409 2850 4838 5413 * * 30 0 * * * * 0 * 5297 0 1000 S 31 4211 * 5108 2101 4737 * * 3858 * 1687 3786 * * * * 3461 * 3272 * * 31 0 * * * * * * 5371 0 0 S 32 * * 4287 4599 * * * 5164 4668 5398 * 3630 4891 5261 3868 1652 2003 * * 4651 32 0 * * * * * * 5371 0 0 N 33 5108 * 3184 3197 4298 4363 * * 5163 4891 5553 2946 4609 3413 * 3396 4651 * * 2556 33 36 5338 * 2585 263 * * 5371 1000 0 L 34 4121 * * 2344 * * * 2937 * 2316 * * 4651 * 4968 * 4623 1728 * * 34 32 5517 * 2322 322 * * 5413 1000 0 I 35 5021 * * 3689 2460 * * 3224 * 1800 4780 * * 2221 * * 5562 5678 * 5375 35 52 4815 * 2807 222 * * 5284 1143 0 Q 36 5679 * * 3014 * 6010 6577 5117 2957 * 5163 3105 * 2999 1966 3875 3973 5963 * * 36 21 6129 * 2807 222 * * 5271 1000 0 K 37 5632 6010 * 5340 * * * 4138 1336 4858 * 4317 * 4742 2177 3561 * 5777 5394 5897 37 0 * * * * * * 5271 0 0 T 38 2621 * * * * * * * * 5627 * 5340 * * * 2462 820 4485 * * 38 0 * * * * * * 5271 0 0 F 39 * * * * 4104 * * 3636 5123 818 4536 * * 5046 5635 * * 4936 5475 3100 39 0 * * * * * * 5271 0 0 D 40 3906 * 1574 2074 * 5446 5857 5627 4339 * * 3154 * 4235 4343 5526 6190 * * * 40 0 * * * * * * 5271 0 0 Y 41 * * * * * * 1826 * * * * * * * * * * * * 478 41 0 * * * * * * 5367 0 0 L 42 1995 * * * 3655 * * * * 1203 * * * * * 5668 4512 2540 * * 42 0 * * * * * * 5367 0 0 N 43 4924 * 3483 2084 * * * * 3447 * * 2581 * 4786 2722 3197 3537 * * * 43 0 * * * * * * 5367 0 0 S 44 6029 * 5494 4818 * * * 5348 1706 3897 * 5187 * 4309 1822 3839 3824 5172 * * 44 0 * * * * * * 5367 0 0 I 45 * * * * 516 * 5229 3975 * 4696 5159 * * 4910 * * * 3452 * 5704 45 43 * 5083 * * * * 5367 0 0 S 46 1635 4506 * 4786 * 5173 5198 4939 5628 * * * * * 4860 1600 3667 4413 * * 46 0 * * * * 0 * 5295 0 1000 R 47 * * * * 4355 4529 * * 1002 4669 * * * * 1614 5431 5676 * * * 47 0 * * * * * * 5367 0 0 C 48 * 3051 * 5083 2152 * * 2681 * 2302 5930 5484 * * 5385 * 4636 3511 5537 4213 48 134 3492 * 0 * * * 5367 2779 0 D 49 * * 2208 4079 * 4467 * * 1631 * * 3275 4422 * 5682 3188 3694 * * * 49 67 5750 5214 0 * * * 5390 1000 0 E 50 2654 * 4158 3859 * 6016 * * 6024 4933 * 2890 1635 5873 * 4279 3508 4674 * * 50 138 3452 * 876 1136 * 0 5339 1866 1000 D 51 3785 * 2817 1242 * * * * 2685 * * * 5638 3454 4660 4931 5402 * * * 51 0 * * * * 0 * 5339 0 1000 S 52 3232 * 3067 2480 * * * * 2967 * * 3087 * 4958 5678 2680 2818 * * * 52 91 4027 * 0 * * * 5390 1858 0 A 53 1200 * * 4946 * * * 3145 * * * 3695 * * * 2164 * 3073 * * 53 28 5704 * 0 * * * 5390 1000 0 S 54 4086 * 4402 2586 * 4534 * 4558 2746 * * * * 4544 1983 4294 4196 3456 * * 54 0 * * * * * * 5390 0 0 K 55 3310 * 3634 1385 * * * * 2554 * * * * 4247 5847 2690 5929 * * 5377 55 0 * * * * * * 5390 0 0 I 56 2434 * * * 5463 * * 3120 * 1092 5437 * * * * * 6597 2515 * * 56 0 * * * * * * 5390 0 0 M 57 5671 5377 4989 * 5718 * 5246 3424 4177 4000 4767 * * * 1640 * * 1685 * * 57 0 * * * * * * 5390 0 0 K 58 4453 * 5463 1134 * * * * 3131 * * 3160 * 4834 3506 4222 3771 * * * 58 0 * * * * * * 5390 0 0 E 59 4165 * 5406 1900 4989 * * 3960 3370 3081 * 4693 * 4301 2610 5618 4721 5031 * * 59 0 * * * * * * 5390 0 0 L 60 * * * * 5185 * * 3512 * 215 * * * * * * 5427 * * * 60 96 3963 * 0 * * * 5390 2191 0 E 61 5241 * 5116 3792 5609 5778 * 4919 2630 1956 3077 5437 * * 5841 3310 5036 3455 * * 61 118 3675 * 1983 421 * * 5384 2389 0 E 62 5430 * 3380 1746 * 3562 * * 3693 * * 3213 * 3637 4249 2476 * * * * 62 220 2823 * 588 1579 * * 5384 2783 0 I 63 * 4501 * 5570 4098 5679 * 2945 3151 2051 3539 4647 4534 * * 5437 4043 5116 * 3452 63 166 3439 5945 261 2597 * * 5384 2407 0 V 64 5403 * 2855 3046 4902 1359 5160 4862 3654 * * 5784 * 4896 4007 * * 4717 * * 64 191 3011 * 867 1147 0 * 5385 2947 1000 K 65 * 5609 * * 3001 * * 3093 5873 965 4177 * 5619 * * 4874 5778 3644 * * 65 28 5719 * 0 * * * 5384 1000 0 R 66 4753 * 3910 3049 * 5537 2396 * 2592 5430 * 4617 4699 * 4299 3601 2804 * * 5692 66 0 * * * * * * 5384 0 0 E 67 * * 3221 1350 5099 * 5647 * 2718 5284 6193 6057 3539 4356 3182 * * * * * 67 0 * * * * * * 5360 0 0 D 68 * * 3169 2236 1563 5828 * 5766 4089 * * * * 5113 3885 4373 * 3656 * 5701 68 0 * * * * * * 5360 0 0 V 69 3425 * * 1058 * * 4169 3608 5284 5828 * * * 5941 * * 2983 3280 * * 69 0 * * * * * * 5360 0 0 R 70 1357 * * * * 5438 * 2588 4918 3528 5198 * * * 2614 * 5547 3499 * * 70 0 * * * * * * 5360 0 0 A 71 1228 4281 * * * * * 3374 * * 4918 * * * * 4048 * 1675 * 5760 71 34 5414 * 1000 1000 * * 5360 1000 0 V 72 3838 4892 * 5399 * * * 5839 2611 3429 2979 4320 * 2005 3495 5653 * 3966 * * 72 0 * * * * * * 5360 0 0 L 73 * * * * 5530 * * 928 * 1378 * * * * * * * 3884 * * 73 0 * * * * * * 5360 0 0 A 74 1751 * * 5013 * 2648 * 3673 * 5410 5228 * * * * 4008 * 1637 * * 74 22 6038 * 1585 585 * * 5360 1000 0 S 75 * * 2214 * * * * * * * * 857 * * * 2260 5395 * * * 75 0 * * * * * * 5360 0 0 I 76 * * * 5013 * * * 1710 * 852 * * * * * 4918 5284 4303 * * 76 0 * * * * * * 5360 0 0 C 77 4423 1508 * * 4064 * * 5647 4031 2495 2748 5641 4918 * 5399 5584 * 4753 * * 77 0 * * * * * * 5360 0 0 P 78 * 3329 * * * * * 5105 * * * * 199 * * * * * * * 78 0 * * * * * * 5360 0 0 T 79 4796 * 3407 1720 * * * 4908 2743 * * 6009 * 3098 4075 3678 3651 4872 * * 79 0 * * * * * * 5360 0 0 T 80 * * 2222 4078 * * 5710 5487 * * * 3032 * * * 2074 1620 * * * 80 0 * * * * * * 5360 0 0 V 81 2339 * * 4608 * * * 3265 5902 3056 5399 5284 2846 * 3728 4228 * 2755 5438 4971 81 0 * * * * * * 5360 0 0 E 82 5399 * 1195 1704 4971 4484 * * 5113 5701 * * * 6098 * 4770 5414 4918 * * 82 0 * * * * * * 5360 0 0 E 83 * * 3320 318 5013 5716 * * * 5113 * * * 5710 * * * * * * 83 0 * * * * * * 5360 0 0 V 84 1365 6038 * * * * * 3343 * 1552 * * * * * 5125 * 2962 * * 84 0 * * * * * * 5360 0 0 R 85 * * * * 5828 5113 4918 5749 1459 * * * * 5766 1071 * 5410 5641 * * 85 22 * 6070 * * * * 5360 0 0 S 86 1354 * * * * * 5069 4853 5653 4175 5558 * * * * 2099 3279 3568 * 5207 86 36 * 5324 * * 0 * 5352 0 1000 V 87 5541 * * * * * * 1234 * 1254 5687 * * * * * * 3406 * 5608 87 0 * * * * 0 * 5319 0 1000 L 88 * * * * 2428 * * 1601 * 2131 5212 * * * * * * 2993 * 3272 88 0 * * * * * * 5346 0 0 V 89 2475 * * 2537 5221 3627 * 5753 * * * * 1809 * * 3633 3444 4447 * 5811 89 74 5351 5304 1000 1000 * * 5459 1000 0 I 90 * * * * 5089 * * 5494 1728 3956 4229 4065 * * 5503 1603 5014 4138 * 5050 90 87 5167 5014 1000 1000 0 * 5437 1000 1000 D 91 * 4847 2459 1511 * 5096 5278 3980 * 2270 * * * 5178 5710 * 5303 4838 * * 91 359 * 2182 * * 0 * 5404 0 1000 P 92 6850 * 4258 1974 * 3697 5000 5093 4612 5009 * 5208 3747 * 2404 4064 5414 * 4901 3885 92 265 * 2573 * * 173 3143 5236 0 3675 S 93 3945 * 2940 * * 3205 5476 * 1751 * * 3066 5035 * 4911 2591 * * * 5178 93 50 * 4884 * * 513 1740 5355 0 2855 T 94 4769 * * * 3894 4369 * 3646 2696 3930 4513 * 5563 * 1957 * 3220 3762 * 4496 94 337 * 2265 * * 1940 436 5419 0 2412 I 95 3919 * 3648 4373 * 3340 5016 4144 4476 4829 4652 * 3200 4562 4829 5106 2151 4079 * * 95 120 * 3652 * * 183 3067 5202 0 3475 Y 96 * * * * 2450 * 4290 1979 * 2216 4751 4957 * * 5536 4765 * * * 2563 96 0 * * * * 0 * 5384 0 2092 S 97 5290 * 4462 3070 * * * * 4530 3878 5648 4855 5616 * * 1568 1983 4899 * * 97 44 * 5062 * * * * 5434 0 0 T 98 4266 * 1804 2017 * 5267 4864 * 4527 * * 5841 2881 4334 5432 5641 3945 * * * 98 0 * * * * * 0 5371 0 1000 E 99 5498 * 2632 534 * 5645 * * 5319 * * * * 5181 * 4996 5510 * * * 99 0 * * * * 0 * 5371 0 1000 Q 100 4468 * 2301 1464 * 5173 * 5101 4053 5062 4899 4365 * 3625 * 5052 4344 * * * 100 0 * * * * * * 5434 0 0 I 101 3128 * * * 5335 5093 * 2008 * 1012 4070 * * * * * * * * 5193 101 0 * * * * * * 5430 0 0 Q 102 4296 * 3534 1795 * * * * 2433 4817 * 5027 5557 2195 5708 4875 5042 * * * 102 0 * * * * * * 5430 0 0 K 103 3476 * 5363 1754 * 4260 * * 1929 * 4830 5621 * 2540 4412 * * * * * 103 0 * * * * * * 5430 0 0 I 104 5257 * * * * * * 636 * 2948 3122 * * * * * 5708 3906 * * 104 0 * * * * * * 5430 0 0 I 105 * * * * 5061 * * 2644 4830 616 * * * * * * 5027 4113 * 4875 105 0 * * * * * * 5430 0 0 E 106 * * 1059 1740 * 5219 * * 3592 * * 3708 4867 * * * * * * * 106 0 * * * * * * 5416 0 0 I 107 * 5377 4139 5133 * * * 1420 4538 2198 * * * * * * 3485 3175 * 4158 107 0 * * * * * * 5162 0 0 I 108 * * * * * * * 1601 * 1415 4829 * * * * * * 1942 * * 108 0 * * * * * * 5162 0 0 K 109 * * * * * * * * 905 * * * * 1941 2282 * * * * * 109 0 * * 0 * * * 4222 0 0 //