HHsearch 1.5 NAME c7ellA_ FAM FILE c7ellA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c7ellA_.a3m DATE Sat Oct 23 08:34:12 2021 LENG 41 match states, 41 columns in multiple alignment FILT 2 out of 6 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 1.2 EVD 0.5089 3.7960 SEQ >ss_dssp CCCSSSCCSCCTTSSSCCCCCCGGGCCCSCCCCCCCHHHHC >sa_dssp EEEDEEDEEEEEECEEEEEEEDEEEEEEEEEEEEEDEEEEE >ss_pred CCCCEEEEEEEEEECCCEECCCCCCCCCCCCEEECCCCCCC >ss_conf 97210667877430587441554333322530242823359 >Consensus gnassivqxxnixgdgnxfxpsaetsssavpslslxpgxln >c7ellA_ GNASSIVQTINVTGDGNVFKPSAETSSTAVPSLSLSPGMLN >UniRef50_Q5IW26(2-42:676) Structural protein muB n=18 Tax=Avian orthoreovirus RepID=Q5IW26_9REOV E=1e-14 s/c=1.98 id=69% cov=102% GNATSVVQNFNIQGDGNHFAPSAETTSSAVPSLSLNPGLLN # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 1225 0 0 N 2 * * * * * * * * * * * 0 * * * * * * * * 2 0 * * * * * * 1225 0 0 A 3 0 * * * * * * * * * * * * * * * * * * * 3 0 * * * * * * 1225 0 0 S 4 * * * * * * * * * * * * * * * 1000 1000 * * * 4 0 * * * * * * 1225 0 0 S 5 * * * * * * * * * * * * * * * 0 * * * * 5 0 * * * * * * 1225 0 0 I 6 * * * * * * * 1000 * * * * * * * * * 1000 * * 6 0 * * * * * * 1225 0 0 V 7 * * * * * * * * * * * * * * * * * 0 * * 7 0 * * * * * * 1225 0 0 Q 8 * * * * * * * * * * * * * 0 * * * * * * 8 0 * * * * * * 1225 0 0 T 9 * * * * * * * * * * * 1000 * * * * 1000 * * * 9 0 * * * * * * 1225 0 0 I 10 * * * * 1000 * * 1000 * * * * * * * * * * * * 10 0 * * * * * * 1225 0 0 N 11 * * * * * * * * * * * 0 * * * * * * * * 11 0 * * * * * * 1225 0 0 V 12 * * * * * * * 1000 * * * * * * * * * 1000 * * 12 0 * * * * * * 1225 0 0 T 13 * * * * * * * * * * * * * 1000 * * 1000 * * * 13 0 * * * * * * 1225 0 0 G 14 * * * * * 0 * * * * * * * * * * * * * * 14 0 * * * * * * 1225 0 0 D 15 * * 0 * * * * * * * * * * * * * * * * * 15 0 * * * * * * 1225 0 0 G 16 * * * * * 0 * * * * * * * * * * * * * * 16 0 * * * * * * 1225 0 0 N 17 * * * * * * * * * * * 0 * * * * * * * * 17 0 * * * * * * 1225 0 0 V 18 * * * * * * 1000 * * * * * * * * * * 1000 * * 18 0 * * * * * * 1225 0 0 F 19 * * * * 0 * * * * * * * * * * * * * * * 19 0 * * * * * * 1225 0 0 K 20 1000 * * * * * * * 1000 * * * * * * * * * * * 20 0 * * * * * * 1225 0 0 P 21 * * * * * * * * * * * * 0 * * * * * * * 21 0 * * * * * * 1225 0 0 S 22 * * * * * * * * * * * * * * * 0 * * * * 22 0 * * * * * * 1225 0 0 A 23 0 * * * * * * * * * * * * * * * * * * * 23 0 * * * * * * 1225 0 0 E 24 * * * 0 * * * * * * * * * * * * * * * * 24 0 * * * * * * 1225 0 0 T 25 * * * * * * * * * * * * * * * * 0 * * * 25 0 * * * * * * 1225 0 0 S 26 * * * * * * * * * * * * * * * 1000 1000 * * * 26 0 * * * * * * 1225 0 0 S 27 * * * * * * * * * * * * * * * 0 * * * * 27 0 * * * * * * 1225 0 0 T 28 * * * * * * * * * * * * * * * 1000 1000 * * * 28 0 * * * * * * 1225 0 0 A 29 0 * * * * * * * * * * * * * * * * * * * 29 0 * * * * * * 1225 0 0 V 30 * * * * * * * * * * * * * * * * * 0 * * 30 0 * * * * * * 1225 0 0 P 31 * * * * * * * * * * * * 0 * * * * * * * 31 0 * * * * * * 1225 0 0 S 32 * * * * * * * * * * * * * * * 0 * * * * 32 0 * * * * * * 1225 0 0 L 33 * * * * * * * * * 0 * * * * * * * * * * 33 0 * * * * * * 1225 0 0 S 34 * * * * * * * * * * * * * * * 0 * * * * 34 0 * * * * * * 1225 0 0 L 35 * * * * * * * * * 0 * * * * * * * * * * 35 0 * * * * * * 1225 0 0 S 36 * * * * * * * * * * * 1000 * * * 1000 * * * * 36 0 * * * * * * 1225 0 0 P 37 * * * * * * * * * * * * 0 * * * * * * * 37 0 * * * * * * 1225 0 0 G 38 * * * * * 0 * * * * * * * * * * * * * * 38 0 * * * * * * 1225 0 0 M 39 * * * * * * * * * 1000 1000 * * * * * * * * * 39 0 * * * * * * 1225 0 0 L 40 * * * * * * * * * 0 * * * * * * * * * * 40 0 * * * * * * 1225 0 0 N 41 * * * * * * * * * * * 0 * * * * * * * * 41 0 * * 0 * * * 1225 0 0 //