HHsearch 1.5 NAME c7egkB_ FAM FILE c7egkB_ COM /bmm/www/servers/phyre2/HH/hhmake -i c7egkB_.a3m DATE Sat May 29 08:31:59 2021 LENG 109 match states, 109 columns in multiple alignment FILT 112 out of 172 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.4 EVD 0.4285 0.4446 SEQ >ss_dssp CEEEEEEEEEEEGGGHHHHHHHHHHTTCCCCEEEEECCCCSCCCCCCSSCGGGCSCCEEEEEEEESSHHHHHHHHHHHHHHTTTTSCEEEEEEEEEECCC HHHHCSSCC >sa_dssp EDEBCCAAACABCDADEDACDAAEECDBDDDDDDECDEEEEDDECECEDEEEEBEDBBACACADADDDECADDABEDADEDBCEECBDECDCDECEBEED EEBCCEEDD >ss_pred CCCCEEEEEEECHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCEECCCCCEECCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEC CEEECCCCC >ss_conf 9873399999718888999999997899738989877534657361255310112361899998684899999999987443167666999977358724 602078899 >Consensus xxpmKxixiIixxxxxxxvxxxLxxxGvxGxTVxxVxGxGxxxxxxxxxxxxxxxxxkvkieiVvxxeevxxxIxxxixxaxxxxxgGxixisdVeViRx xxFxxxxxx >c7egkB_ AKPANKLVIVTEKILLKKIAKIIDESGAKGYTVMNTGGKGSRNVRSSGQPNTSDIEANIKFEILTETREMAEEIADRVAVKYFNDYAGIIYICSAEVLYG HTFCGPEGC >UniRef50_Q0C204(6-101:101) Putative uncharacterized protein n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C204_HYPNA E=3e-05 s/c=0.52 id=13% cov=86% --------LIIERMAAPRAFRILEDAGLTGYTVLPAI-SGFGGATRWNRDTDMSASSDMVVIVSIGAQDRIDAALTEI-ERLLSNHIGVLSVGEVRVLRP GRF------ >UniRef50_C6HUZ0(8-111:117) Nitrogen regulatory protein P-II n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HUZ0_9BACT E=4e-20 s/c=0.95 id=19% cov=95% --PMKKVDIIVSGERIPFVRDLLARVRVTGYTIIpNVSGMGHSGFYEGN--LIYNETSSLVLLMTVVKEEKVELILEGL-TPLFERYSGIMYVSDVAVSR QDHFVHSSG- >UniRef50_O26760(4-104:115) Nitrogen regulatory protein P-II 2 n=1255 Tax=cellular organisms RepID=GLNB2_METTH E=3e-06 s/c=0.52 id=21% cov=89% ---MKEIVAIIRPEKLEEVKNALEAAGCHGMTVTEVRGRGRQlGITESYRGRDYriDLLPKTKIEIVVNDEDVDTVVETIVKSAQTGDIGdGKIFISGVd EVVR---------- >UniRef50_A0M0L7(1-96:112) Nitrogen regulatory protein P-II n=2 Tax=Flavobacteriaceae RepID=A0M0L7_GRAFK E=3e-10 s/c=0.69 id=21% cov=74% ----------------QKVIESLSESGFKSMTLSQGEGTGAFKAKGASPSLDFRVTDSpvVKLELVCQNEEAQSAIDIILENAKTTEPGdGIIYLSDIE- ------------ >UniRef50_Q0F3G7(1-97:102) Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3G7_9PROT E=6e-08 s/c=0.60 id=18% cov=81% ---MKMLNLVTHANMQHQLSDTLRDIEqVSGFTFTPVQGHGSHVDTDpflSSRDRVVGYTPRIKVEVLLADDDV-EPVLAHLREAMINERNQGVY----- ------------- >UniRef50_A7ICX6(17-114:133) Nitrogen regulatory protein P-II n=5 Tax=Rhizobiales RepID=A7ICX6_XANP2 E=0.0005 s/c=0.47 id=13% cov=62% ---LKLLTALIHPHLEGRVVQALQELpQFPGFTLVEvrgQGRGRGVGGTYVASEYDLVYQRHLRLEIVCRSSET-------------------------- ------------- >UniRef50_C6NWX0(21-113:130) Nitrogen regulatory protein n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NWX0_9GAMM E=4e-10 s/c=0.71 id=21% cov=64% ------LTVVLRMYRLDPLCDALVELGVSGITLSDVEGVGRQQGFStlpSGVWYQSKSHPKVRLDVVMPQKLVPQAIA---------------------- ------------ >UniRef50_B1I5X9(7-104:105) Putative uncharacterized protein n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I5X9_DESAP E=4e-10 s/c=0.67 id=15% cov=91% ----KRISTIVEGTYVDAVVELAGNSGASGFTIYEGFRGKGRHGMKKSRGGVGDLSGNVEV-VVIASPEVADRILRGLQEMMDRGIRLVVHVADVQVIRD HHF------ # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * A 1 0 * * * * * * * * * * * * * * * * * * * 1 0 * * * * * * 1000 0 0 K 2 * * * * * * * * 0 * * * * * * * * * * * 2 0 * * * * * * 2961 0 0 P 3 * * * * 4722 * * * * * * 2617 492 * 3504 * * * * * 3 0 * * * * * * 4304 0 0 A 4 2701 5398 * * * * * * 5306 2451 703 * * * * * * * * * 4 0 * * * * * * 5418 0 0 N 5 5519 * * * * * * * 246 * * 5152 * * 4579 5747 5090 5893 * * 5 0 * * * * * * 6548 0 0 K 6 5647 * * 4225 * * * 6680 1550 1869 3691 6742 * 4805 2719 6511 * * 5956 * 6 0 * * * * * * 6560 0 0 L 7 * * * * * * * 1653 * 1925 6722 * * * * * * 1289 * * 7 0 * * * * * * 6577 0 0 V 8 * * 3998 1858 * * * 4344 * 5498 4117 5633 * 5985 * 4438 1811 2772 * 5710 8 0 * * * * * * 6582 0 0 I 9 1670 * * * * * * 1137 * 4183 * * * * * * 4804 2834 * * 9 0 * * * * * * 6763 0 0 V 10 * * * * * * * 806 * 3766 * * * * * * 4442 1785 * 5782 10 0 * * * * * * 6763 0 0 T 11 3732 4902 * * 4575 4766 * 1583 * 4167 5721 * * * * 5608 2982 1960 * * 11 0 * * * * * * 6763 0 0 E 12 5727 * 3555 1778 * * 4040 6044 3011 * * 4129 5986 4664 2200 3748 * * * * 12 0 * * * * * * 6763 0 0 K 13 2229 * * 3696 * 3551 5933 5114 5229 5608 5862 * 1764 3813 4373 5113 3799 * * * 13 0 * * * * * * 6763 0 0 I 14 2822 * 3964 2423 4148 5047 4538 4215 5674 3575 5656 4960 4504 * 5993 4243 4305 3677 * 5177 14 0 * * * * * * 6763 0 0 L 15 3729 * 6116 4523 4863 * 4371 5277 2090 2260 3935 5099 * * 2991 * 5868 5262 * 4292 15 0 * * * * * * 6763 0 0 L 16 4004 * 6253 2797 5482 * * 5314 4829 1345 6788 * * 3183 5547 4170 * 3962 * 4507 16 0 * * * * * * 6995 0 0 K 17 5167 * 1973 1917 6117 3717 6106 * 4093 * * 5352 3954 4079 5356 3260 6358 * * * 17 0 * * * * * * 7110 0 0 K 18 3086 * 2894 2747 4547 * 5958 6192 3394 6212 6165 4732 3917 4425 2508 5068 4392 * * * 18 0 * * * * * * 6175 0 0 I 19 4577 * * * * * * 2963 * 1933 4589 * * * * * 3978 1111 * * 19 0 * * * * * * 7123 0 0 A 20 4510 6220 * 4327 5886 * * 2203 2301 2993 5834 7662 * 4917 3769 5570 3794 3209 * * 20 0 * * * * * * 7121 0 0 K 21 4114 * 2404 2378 * 6526 6169 * 3040 6782 * 5495 * 3146 3454 3931 3595 5694 * 6454 21 52 4807 * 0 * * * 6180 1000 0 I 22 1406 * 5422 3577 * 4421 6770 3531 5357 2532 6203 * * 6454 4376 4304 5027 5543 * * 22 0 * * * * * * 6180 0 0 I 23 4718 * * * 4819 * * 3576 * 440 3843 * * * * * * 4790 * * 23 0 * * * * * * 6199 0 0 D 24 3017 * 3185 2720 6951 4894 4318 5410 3507 5111 5349 4962 * 4086 2523 4202 6258 5860 * 6894 24 0 * * * * * * 6199 0 0 E 25 2868 * 3859 2437 * 5028 6023 * 2572 * * 4802 * 3350 3145 3889 3859 6402 * * 25 0 * * * * * * 6233 0 0 S 26 2454 6091 * 3892 5665 6180 5949 2920 6934 2472 3564 5276 * 5484 5446 3570 6446 3217 * 7302 26 47 4957 * 0 * * * 6233 1000 0 G 27 * * 6097 4655 * 285 5480 * * * * 5111 6102 4859 6151 6588 * * * * 27 12 6859 * 0 * * * 6107 1000 0 A 28 2734 5412 * * 3050 * 4626 2467 * 4071 6097 * * * * * * 1360 * 5621 28 0 * * * * * * 6107 0 0 K 29 4812 * 4572 4669 * 3986 3609 6387 3621 * * 6174 2683 5760 3928 2721 2444 5480 * 4913 29 0 * * * * * * 6107 0 0 G 30 3543 * 6316 * 5588 510 * * * * * 6127 6783 * 6297 3038 * * 5577 * 30 0 * * * * * * 7206 0 0 Y 31 5445 7240 * * 2612 6546 6383 3543 * 2747 2104 * * * * * * 4419 4891 2082 31 0 * * * * * * 7206 0 0 T 32 4762 * * * * * * 5405 * * 5574 5659 * * * 3169 344 * * * 32 44 5066 * 0 * * * 7206 2151 0 V 33 7675 5491 * * 4486 * * 2183 5337 3039 6368 5405 * * 6091 * 6222 1035 * 6694 33 20 6203 * 0 * * * 7206 1000 0 M 34 6919 6297 6507 * 4418 5418 6368 3900 6594 3666 3655 6762 7028 * 4916 1952 2519 3928 7260 3394 34 148 3355 * 0 * * * 7206 3816 0 N 35 5051 * 2408 2142 * 6400 4973 * 4413 * * 2384 3290 3610 4898 5128 5244 * * * 35 81 4491 6600 722 1345 * * 7206 2693 0 T 36 2655 4659 * * * 5167 * 2967 * 6074 * * * 5363 * * 4894 803 * * 36 45 5017 * 0 * * 0 7198 1865 1000 G 37 4683 * 6217 3683 4287 3997 4328 4561 2842 4021 5192 * * 4423 3141 2823 3829 7002 4879 5511 37 33 * 5470 * * * 0 7198 0 1000 G 38 * * * * * 199 * * * * * * * * 4019 * * 4976 * 4825 38 24 5897 * 2000 415 1525 616 6186 1000 2216 K 39 6176 3337 * 4863 2859 4226 4524 * 3242 6665 6285 6206 * 4182 2454 4123 4776 5895 7000 3057 39 21 6118 * 2000 415 1000 1000 7190 1000 1666 G 40 * * * 4573 * 180 * * 5899 * * * * * 5362 4867 * * * * 40 88 4396 6415 1383 698 * 0 7198 2299 1000 S 41 3259 * 5274 4069 6071 4037 3142 6243 3634 5426 * 4378 4497 3884 2646 2910 5689 5521 6647 * 41 55 5741 5762 1585 585 1019 982 7260 1661 1750 R 42 * * 6410 3137 6393 4761 2754 * 6094 * * 5734 * 1653 2255 5413 5581 4694 * 4898 42 9 7335 * 0 * * 0 7247 1000 2165 N 43 5290 * * 4441 * 1544 4083 7047 2302 6233 6330 4446 4465 4882 3790 5567 4484 5940 * 6511 43 67 5774 5193 1585 585 1523 617 7242 1567 2165 V 44 3856 * 4360 4224 5303 1336 * 4671 5632 4243 5042 4640 * 5560 * 4823 5086 2849 * * 44 235 2857 6318 1951 432 2166 364 7248 3824 2777 R 45 4836 * * * 4889 6459 2791 4552 4941 4844 3961 5418 * 3731 2482 * 2879 4293 4965 3260 45 155 4312 4271 1609 573 2242 343 7234 2410 2642 S 46 5878 * 3425 3609 4824 4245 * 6369 2913 5149 6022 5407 * 4522 3958 3914 3220 5994 5727 2383 46 77 5017 5589 1585 585 1417 677 7128 2126 3758 S 47 4265 * 6507 3471 6387 2291 6457 5675 4457 5844 6117 * 6676 3465 2633 2645 5410 4787 5884 5369 47 130 4762 4336 1585 585 1117 891 7161 1762 3792 G 48 4054 6306 3237 5456 * 1686 6283 3980 5598 5041 * 3390 6542 6154 4891 2823 5450 5544 * 5588 48 54 6420 5316 1585 585 1363 710 7112 1000 3600 Q 49 5074 6398 2783 2540 5335 5504 * 4936 4204 5073 4808 6604 4981 4671 3607 3582 4961 4070 4249 4289 49 47 6229 5714 1585 585 471 1843 7108 1000 3296 P 50 4289 * 3018 2615 5314 3380 5370 5994 3977 6719 5575 * 3599 4946 3174 4368 6151 3708 5015 6453 50 12 * 6915 * * 880 1130 7234 0 2607 N 51 4831 * 6197 5632 4125 2834 6914 4459 * 2579 5678 4460 6182 4084 5939 4005 3481 3542 * 3051 51 87 5373 4865 1585 585 1675 542 7256 2198 2061 T 52 5729 6322 2776 3716 * 3552 6631 4221 4399 3120 4519 5344 4909 6423 4736 5357 3549 2697 * 5616 52 109 5324 4379 1585 585 1956 430 7182 1859 2858 S 53 4469 6152 4403 3655 3692 3379 6485 4159 * 5002 5036 5837 * * 6279 3254 2857 3095 5936 3249 53 160 4369 4140 1520 619 1779 497 7148 2430 3565 D 54 * * 1637 3561 * 6469 3456 * 4606 6783 * 2941 4788 4835 4308 3778 3933 5329 * 5272 54 43 * 5082 * * 1525 616 7086 0 4102 I 55 3552 * 5170 3539 2477 6168 * 4209 6391 1874 5417 * * * * 4229 5375 4064 * 3212 55 60 6363 5117 1000 1000 1553 601 7151 1000 4139 E 56 4806 * 4782 4884 4579 4239 3727 3442 5356 2196 4214 5314 * 4774 4882 3361 3751 4044 * 7077 56 0 * * * * 1603 576 7140 0 3618 A 57 3150 * 3563 3549 * 4335 * * 3493 * * * 1645 4444 4338 2930 4935 * * * 57 36 * 5338 * * 1528 614 7191 0 3060 N 58 5244 * 5926 6075 * 5983 4381 * 1152 6208 4025 2313 * * 3554 3892 * * * * 58 36 6323 6343 1000 1000 1813 483 7147 1000 3241 I 59 6380 * * 6058 6410 6549 * 2648 6870 2381 5355 * * * 4645 4951 3415 1322 * * 59 0 * * * * 343 2241 7153 0 3169 K 60 5321 * * 4082 * * 6469 6153 1434 6137 3727 * * 4321 2225 5289 * 3582 * 4115 60 0 * * * * 0 * 7221 0 1000 F 61 5822 * * * 4496 * * 1690 * 1772 3587 * * * * * * 1988 * * 61 38 * 5251 * * * * 7254 0 0 E 62 * * 4035 824 4883 * * 3516 5536 4509 4151 * * * 6175 4959 5034 4196 * * 62 22 * 6030 * * 942 1060 7227 0 1723 I 63 5110 4606 * * 5797 * * 1614 * 3076 3795 * * * * 4318 3596 1933 * * 63 0 * * * * 579 1596 7237 0 2321 L 64 3436 * * * 3768 6824 * 2955 6333 3259 * * * * * 5263 5393 948 * 6447 64 16 6476 * 1000 1000 0 * 7235 1000 1000 T 65 4378 2195 * * * * * 3096 * 4567 5319 * * * * * 4256 1009 * * 65 106 * 3822 * * * * 7254 0 0 E 66 2744 6161 2736 3336 * 4445 * * 4660 5951 5455 3860 3423 5321 3741 3271 4164 4577 * * 66 36 * 5337 * * 0 * 7237 0 3746 T 67 3374 * 1530 2860 * * 6628 * 3922 * * 4327 4084 4895 * 2996 3723 * * * 67 38 * 5263 * * 984 1016 7238 0 1587 R 68 3700 * 3053 1325 * 6845 * 4424 3978 6014 * 5152 3666 4133 4996 4153 * * * 5811 68 68 * 4444 * * 0 * 7242 0 2585 E 69 6593 5509 1993 1612 7002 6563 4957 5240 3780 5696 4940 4992 7018 3921 4822 7131 6581 5079 * * 69 0 * * * * 0 * 7197 0 2610 M 70 3019 * * 6444 * * * 4528 4101 2773 5901 * * 4191 4239 * 3600 1376 * 5326 70 33 * 5486 * * * * 7260 0 0 A 71 1715 6406 2566 2213 * 6036 * 4002 * 4647 6523 6212 5227 4124 6104 5654 * 4696 * * 71 0 * * * * 0 * 7095 0 1716 E 72 3887 * 1773 1742 * 4675 * * 3800 5637 6356 5344 * 4437 4681 4938 4176 * * * 72 21 * 6124 * * * * 7247 0 0 E 73 2440 * * 5465 * 6576 6306 3074 2904 3637 * 5245 4543 6034 3846 5948 4068 2270 * * 73 26 5824 * 1000 1000 0 * 7215 1000 1000 I 74 4485 * * * 5397 * * 1066 * 2841 5875 * * * * * 5576 1855 * * 74 0 * * * * * * 7231 0 0 A 75 2524 * 3356 2823 4487 * * 4850 6301 2053 4831 3949 * 5635 5799 5516 4966 4004 * * 75 0 * * * * * * 7202 0 0 D 76 2717 * 3042 3016 6112 6522 6395 3221 5371 3984 * 6388 * 4824 3725 3941 3033 4039 * * 76 18 * 6353 * * * * 7183 0 0 R 77 3429 * 6198 3197 5786 3404 4547 1644 5993 4232 * 4842 * 6166 4845 * 5665 3247 5864 6117 77 21 * 6089 * * 0 * 7172 0 1000 V 78 4626 4568 * * 4462 * 6060 2004 4068 2191 5153 * * 6205 5395 6887 4135 2334 * * 78 115 * 3705 * * * 0 7162 0 1000 A 79 3269 6371 5017 2349 4829 * 5026 5875 2400 5940 * 5315 * 2648 3600 4031 5231 6227 * * 79 117 * 3685 * * 290 2457 7029 0 3279 V 80 2001 * 3715 1988 * 6096 5813 * 5531 * * 5015 * 4243 4814 3864 3213 3792 * * 80 91 6412 4344 0 * 0 * 7073 1000 3151 K 81 1237 * 5640 5187 * 4770 * 6187 3766 3825 5553 5894 2765 5204 4582 6206 4673 5224 * * 81 31 * 5556 * * 0 * 7157 0 2029 Y 82 4896 * * * 3855 * 4575 5846 3519 3314 3704 4452 * 3757 4076 * * 3504 4490 1933 82 0 * * * * 0 * 7027 0 1000 F 83 5993 * 5281 5720 2287 5730 * 3751 * 2498 * * * 4674 * 4361 1634 5317 * 5081 83 64 4532 * 0 * * * 6872 1650 0 N 84 3044 * 5879 3064 * 1780 4895 * 3546 5730 * 3334 3827 5024 4692 4730 4783 * * * 84 62 4566 * 1145 868 * * 6872 1699 0 D 85 5879 * 3105 3045 * 4172 2704 * 3396 5944 * 2431 * 3620 4145 4487 5476 * * 4832 85 0 * * * * * * 6872 0 0 Y 86 5776 * * * 3024 6001 3311 2609 * 5755 5123 4722 5777 * 3634 5722 5366 4111 * 1769 86 0 * * * * * * 6875 0 0 A 87 2396 * 5147 * * 1040 * 4503 * * * 5813 3487 * 5277 3251 6194 * * * 87 585 1585 * 101 3884 * * 6875 4312 0 G 88 * * * * 4796 493 * 4175 * 3359 4588 * * 5813 * * * 4591 * * 88 33 5466 * 3322 152 * * 6875 1000 0 I 89 5926 * * 5147 4815 5813 * 2329 1864 4537 4978 * * * * * 4670 1785 5380 * 89 0 * * * * * * 6875 0 0 I 90 3138 3094 * * * * * 1428 * 3349 4219 * * * * * 3902 2482 * * 90 49 * 4917 * * * * 6875 0 0 Y 91 5210 * * * 1373 * 5260 4830 * 4947 * * * * * 4600 * * 3905 1376 91 0 * * * * 0 * 6829 0 1455 I 92 3997 * * * * * * 1425 * 3387 4894 * * * 5823 * 5699 1326 * * 92 0 * * * * * * 6860 0 0 C 93 4152 4031 4508 5434 * 5700 6032 4638 5790 5753 4929 6086 * 4964 * 1385 2774 6293 5724 3968 93 0 * * * * * * 6860 0 0 S 94 * * 918 3542 * 5649 5594 * * * * 4444 2125 5978 * 4661 6187 * * * 94 0 * * * * * * 6860 0 0 A 95 3114 5259 * * * * * 2767 * * * * * * * * * 491 * * 95 77 4268 * 0 * * * 6815 1839 0 E 96 4629 * 3554 1237 * 4707 5187 * * * 5493 * * 3262 3134 3277 * * 4604 * 96 42 5130 * 0 * * * 6707 1000 0 V 97 4070 * * 4709 * * * 5235 * * * * * * * * 4667 258 * * 97 56 4720 * 0 * * * 5866 1000 0 L 98 4812 4966 * 4699 * * * 1668 * 1903 * * * * 4632 3980 * 2264 * * 98 0 * * * * * * 5828 0 0 Y 99 * * 4602 * * * * * * * * * * * 167 * 4898 * * 4847 99 0 * * * * * * 5782 0 0 G 100 3545 * 2803 * * 2135 * 4866 4786 * * * 1375 4652 * * * 4393 * * 100 0 * * * * * * 5113 0 0 H 101 4927 * 1955 1250 * 4325 2806 * * * * * * 4198 * * 4598 * * * 101 0 * * * * * * 5063 0 0 T 102 * * * * * * 2933 * 1454 * * * * * 1699 4198 4409 * * 3400 102 0 * * * * * * 5063 0 0 F 103 * * * * 54 * * * * * * * * * * * * * * 4760 103 0 * * * * * * 5063 0 0 C 104 * 1484 * * * * * * 1727 * * * * * * * * 1554 * * 104 0 * * * * * * 2122 0 0 G 105 * * * * * 601 1554 * * * * * * * * * * * * * 105 0 * * * * * * 2122 0 0 P 106 * * * * * 1727 * * * * * * 1484 * * 1554 * * * * 106 0 * * * * * * 2122 0 0 E 107 * * * 1484 * 1727 * * * * * * * * * 1554 * * * * 107 0 * * * * * * 2122 0 0 G 108 * * * * * 0 * * * * * * * * * * * * * * 108 0 * * * * * * 2122 0 0 C 109 * 0 * * * * * * * * * * * * * * * * * * 109 0 * * 0 * * * 1000 0 0 //