HHsearch 1.5 NAME c7dhgB_ FAM FILE c7dhgB_ COM /bmm/www/servers/phyre2/HH/hhmake -i c7dhgB_.a3m DATE Sat May 15 08:26:30 2021 LENG 36 match states, 36 columns in multiple alignment FILT 2 out of 6 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 1.2 EVD 0.5374 4.8161 SEQ >ss_dssp CCCCCTTCCHHHHHHHHHHHHHHHHHHHTSHHHHHC >sa_dssp EEDEEEECEEEDCEDCEEDCDDDEDDEEECEEDEEE >ss_pred CEEEEECCCEEHHHHHHHHHHHHHHHHHCCCEEEEC >ss_conf 956851880105787621445665332117334519 >Consensus piilrlgsxlslxmarxxlxslexxafqxtpixvqm >c7dhgB_ PIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQM >UniRef50_P59636(44-79:98) Protein 9b n=49 Tax=Betacoronavirus RepID=ORF9B_CVHSA E=8e-07 s/c=1.52 id=73% cov=103% PIILRLGSQLSLSMARRNLDSLEARAFQSTPIVVQM # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * P 1 * * * * * * * * * * * * 0 * * * * * * * 1 0 * * * * * * 1189 0 0 I 2 * * * * * * * 0 * * * * * * * * * * * * 2 0 * * * * * * 1189 0 0 I 3 * * * * * * * 0 * * * * * * * * * * * * 3 0 * * * * * * 1189 0 0 L 4 * * * * * * * * * 0 * * * * * * * * * * 4 0 * * * * * * 1189 0 0 R 5 * * * * * * * * * * * * * * 0 * * * * * 5 0 * * * * * * 1189 0 0 L 6 * * * * * * * * * 0 * * * * * * * * * * 6 0 * * * * * * 1189 0 0 G 7 * * * * * 0 * * * * * * * * * * * * * * 7 0 * * * * * * 1189 0 0 S 8 * * * * * * * * * * * * * * * 0 * * * * 8 0 * * * * * * 1189 0 0 P 9 * * * * * * * * * * * * 1000 1000 * * * * * * 9 0 * * * * * * 1189 0 0 L 10 * * * * * * * * * 0 * * * * * * * * * * 10 0 * * * * * * 1189 0 0 S 11 * * * * * * * * * * * * * * * 0 * * * * 11 0 * * * * * * 1189 0 0 L 12 * * * * * * * * * 0 * * * * * * * * * * 12 0 * * * * * * 1189 0 0 N 13 * * * * * * * * * * * 1000 * * * 1000 * * * * 13 0 * * * * * * 1189 0 0 M 14 * * * * * * * * * * 0 * * * * * * * * * 14 0 * * * * * * 1189 0 0 A 15 0 * * * * * * * * * * * * * * * * * * * 15 0 * * * * * * 1189 0 0 R 16 * * * * * * * * * * * * * * 0 * * * * * 16 0 * * * * * * 1189 0 0 K 17 * * * * * * * * 1000 * * * * * 1000 * * * * * 17 0 * * * * * * 1189 0 0 T 18 * * * * * * * * * * * 1000 * * * * 1000 * * * 18 0 * * * * * * 1189 0 0 L 19 * * * * * * * * * 0 * * * * * * * * * * 19 0 * * * * * * 1189 0 0 N 20 * * 1000 * * * * * * * * 1000 * * * * * * * * 20 0 * * * * * * 1189 0 0 S 21 * * * * * * * * * * * * * * * 0 * * * * 21 0 * * * * * * 1189 0 0 L 22 * * * * * * * * * 0 * * * * * * * * * * 22 0 * * * * * * 1189 0 0 E 23 * * * 0 * * * * * * * * * * * * * * * * 23 0 * * * * * * 1189 0 0 D 24 1000 * 1000 * * * * * * * * * * * * * * * * * 24 0 * * * * * * 1189 0 0 K 25 * * * * * * * * 1000 * * * * * 1000 * * * * * 25 0 * * * * * * 1189 0 0 A 26 0 * * * * * * * * * * * * * * * * * * * 26 0 * * * * * * 1189 0 0 F 27 * * * * 0 * * * * * * * * * * * * * * * 27 0 * * * * * * 1189 0 0 Q 28 * * * * * * * * * * * * * 0 * * * * * * 28 0 * * * * * * 1189 0 0 L 29 * * * * * * * * * 1000 * * * * * 1000 * * * * 29 0 * * * * * * 1189 0 0 T 30 * * * * * * * * * * * * * * * * 0 * * * 30 0 * * * * * * 1189 0 0 P 31 * * * * * * * * * * * * 0 * * * * * * * 31 0 * * * * * * 1189 0 0 I 32 * * * * * * * 0 * * * * * * * * * * * * 32 0 * * * * * * 1189 0 0 A 33 1000 * * * * * * * * * * * * * * * * 1000 * * 33 0 * * * * * * 1189 0 0 V 34 * * * * * * * * * * * * * * * * * 0 * * 34 0 * * * * * * 1189 0 0 Q 35 * * * * * * * * * * * * * 0 * * * * * * 35 0 * * * * * * 1189 0 0 M 36 * * * * * * * * * * 0 * * * * * * * * * 36 0 * * 0 * * * 1189 0 0 //