HHsearch 1.5 NAME c7c3fE_ FAM FILE c7c3fE_ COM /bmm/www/servers/phyre2/HH/hhmake -i c7c3fE_.a3m DATE Sat Oct 17 08:48:39 2020 LENG 89 match states, 89 columns in multiple alignment FILT 20 out of 24 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.9 EVD 0.4200 0.3465 SEQ >ss_dssp CHHHHHHHHHTTTCEEEECSCCEECCSTTCSCEECTTCEEEEEEETTEETTEECCCSSCEEEEEEEEETTTEEEEEEEEECGGGEEECC >sa_dssp EEEEBDDADECDECDACADDECDBEDBEECEDBDADDCDCDADDBCBDEEEEEDECEDBACACAEDECEEDCEBEBDBDADDEBBDDBE >ss_pred CCCHHHHHHHHCCCEEEEEEEEEEEECCCCCCCEECCCEEEEEEEEHHCCCEEEECCCCEEEEEECCCCCCCCEEEEEEECHHHEEECC >ss_conf 95213456763387678830179997387787420244057745303116627108964899970468887871599984710213418 >Consensus xxxxxxxxxxkvGxrVRVxxpvxVyHvPkxxxxDLxGmEGxvxxxvxxwkGkxISANlPxkVxfxxxxxgxxxxKFxaHLkedExExid >c7c3fE_ ETEEDEKAKEKIGARVRVTVPLKVYHVVRVPEVELMGMEGFIKDYVVLWKGKKISANLPFKVQFVKEIEGRGPVKFFTHLKEDEFELID >UniRef50_A9RF67(91-173:1470) Intraflagellar transport protein IFT122 n=4 Tax=Physcomitrella patens subsp. patens RepID=A9RF67_PHYPA E=9e-27 s/c=1.46 id=48% cov=94% ----EGAGKVEAGTRIRVIGPLKVYHVPKHPELDIVGLEGEVKEVVTTFKGKPVSATLPFKVQLMT--PGEESRKFVVHLKEGELEVVD >UniRef50_P80680(17-96:97) Ferredoxin-thioredoxin reductase, variable chain n=15 Tax=Poaceae RepID=FTRV_MAIZE E=3e-24 s/c=1.40 id=59% cov=90% ----------KIGRRVRVTAPLRVYHVLKAPDLDIQGMEGVVKQYVCVWKGKRVTANFPFKVEFELAVEGQPkPVRFFAHLREDEFEFVD >UniRef50_A8JA70(35-113:113) Ferredoxin thioredoxin reductase, variable chain n=1 Tax=Chlamydomonas reinhardtii RepID=A8JA70_CHLRE E=5e-18 s/c=1.16 id=40% cov=87% ------------GQKVKVIASVKVFHAPKHHEgMDLKGMEGTVTKDVTHFKGKTLSATLPYQVQFlvPGESDTDKHMKFSAHLAEDEIAAV- >UniRef50_Q5YBD3(25-114:114) Plastid ferredoxin-thioredoxin reductase variable chain subunit A n=1 Tax=Helicosporidium sp. ex Simulium jonesi RepID=Q5YBD3_HELSJ E=2e-17 s/c=1.00 id=32% cov=88% ------------GATVRVTSPITVWHVPKFRKgMNVQGLQGKIMQNVSVFRGVPLSPSKPWKVAIDAKDPAGQAFKFVMHLGDEEMEVLN >UniRef50_C1N924(38-122:122) Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N924_9CHLO E=2e-17 s/c=1.06 id=41% cov=91% -------AKLEKGDKVKVTSSVTVYHVLGMkgAAVDLNGMEGEVHSRADDLDGVYISANLEVKIQFPIPGNDKGKM-FIAHMKEDEVEKV- >UniRef50_UPI0001C33716(2-73:79) Ferredoxin thioredoxin reductase variable alpha chain n=1 Tax=cyanobacterium UCYN-A RepID=UPI0001C33716 E=6e-09 s/c=0.86 id=38% cov=80% ----------KIGDRIRIIESIIVYHHPEHRQeaFDLKGMEGEIINIISDWEGRPLSANLPLLVKI--------SEKFKVHVCDNEVEVL- >UniRef50_Q55781(3-74:75) Ferredoxin-thioredoxin reductase, variable chain n=19 Tax=cellular organisms RepID=FTRV_SYNY3 E=5e-05 s/c=0.68 id=42% cov=80% -----------VGDRVRVTSSVVVYHHPEHKKtaFDLQGMEGEVAAVLTEWQGRPISANLPVLVKFEQ--------RFKAHFRPDEVTLIE >UniRef50_P38365(89-172:174) Ferredoxin-thioredoxin reductase, variable chain, chloroplastic n=1 Tax=Spinacia oleracea RepID=FTRV_SPIOL E=1e-24 s/c=1.36 id=56% cov=94% -----KKNLEKVGCKVKVKSPLKVYHVPKLPEVELTpDMVGVIKQYVGFWKGKYISPNYPFKVEYRIDVPDRGSVKLVVHLKEEEFEII- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * E 1 * * * 0 * * * * * * * * * * * * * * * * 1 0 * * * * * * 1334 0 0 T 2 * * * * * 1593 * * * * * * * 1605 * * 1557 * * * 2 0 * * * * * * 1334 0 0 E 3 * * * 402 * * * * * * * * * * * * * 2039 * * 3 0 * * * * * * 1456 0 0 E 4 * * * 740 * * * * 2218 * * * * 2423 * * * * * * 4 0 * * * * * * 1583 0 0 D 5 * * 1633 906 * * * * * * * * 2796 * * * * * * * 5 0 * * * * * * 1811 0 0 E 6 1972 * 3044 2986 * 2406 * 2822 2578 * * * * * * * * * * * 6 0 * * * * * * 1929 0 0 K 7 1468 * * * * * * * 2076 * * * * 3171 2344 * * 3424 * * 7 0 * * * * * * 2154 0 0 A 8 745 * * * * 2309 * * * 3533 * 3116 * * * * * * * * 8 0 * * * * * * 2298 0 0 K 9 * * * 2726 * * * * 641 3116 3437 * * * * * * * * * 9 0 * * * * * * 2298 0 0 E 10 2579 * * 1875 * 3437 * * * 1911 * 3763 * * * * * 2965 * * 10 116 3690 * 1000 1000 * * 2298 1000 0 K 11 * * * 1773 * * * * 499 * * * * * * * * * * * 11 0 * * * * * * 2566 0 0 I 12 2712 * * * * * * 1932 3607 * * * * * * * * 991 * * 12 0 * * * * * * 2782 0 0 G 13 * * * * * 0 * * * * * * * * * * * * * * 13 0 * * * * * * 3092 0 0 A 14 2114 4196 1650 * * * * * 4296 4414 * * * 3859 4448 2917 4299 * * * 14 0 * * * * * * 3092 0 0 R 15 * * * * * * * * 1746 * * * * * 882 4710 3046 * * * 15 0 * * * * * * 3092 0 0 V 16 * * * * * * * 2800 * * * * * * * * * 224 * * 16 0 * * * * * * 3092 0 0 R 17 * * * * * * * * 1583 * * * * * 586 * * * * * 17 0 * * * * * * 3092 0 0 V 18 * * * * * * * 3230 * * * * * * * * * 163 * * 18 0 * * * * * * 3092 0 0 T 19 4266 * * * * * * 2520 2211 * * * * * 4551 * 1165 3857 * * 19 0 * * * * * * 3092 0 0 V 20 2295 * * 3333 * 3420 * * * * * * * * 4266 1505 4414 2717 * * 20 0 * * * * * * 3092 0 0 P 21 * * * * * * * * 3857 * * * 730 * * 1608 * * * * 21 0 * * * * * * 3092 0 0 L 22 * * * * * * * 2509 * 1380 * * * * * * 4414 1346 * * 22 0 * * * * * * 3092 0 0 K 23 * * * * * * * 3300 1296 3857 * * * * 3370 * 2438 2826 * * 23 0 * * * * * * 3092 0 0 V 24 * * * * * * * * * * * * * * * * * 0 * * 24 0 * * * * * * 3092 0 0 Y 25 * * * * 3270 * 4296 * * * * * * * * * * * 3046 465 25 0 * * * * * * 3092 0 0 H 26 * * * * * * 0 * * * * * * * * * * * * * 26 0 * * * * * * 3092 0 0 V 27 3859 * * 4565 * * 2044 * * * * * * * * * * 630 * * 27 0 * * * * * * 3092 0 0 V 28 4296 * * * * * * * * 3195 * 4710 393 * * * * 4643 * * 28 0 * * * * * * 3092 0 0 R 29 * * 3449 2728 * 3979 * * 873 * * * * * 2755 * * * * * 29 103 3857 * 1585 585 * * 3092 1000 0 V 30 3370 * * * 3046 * 1465 * 3857 4196 3979 * * * * * 4551 2393 * * 30 95 3979 * 1000 1000 * * 3092 1000 0 P 31 3979 * * * * * 3859 * 4494 * * 3857 1201 * 1647 * * * * * 31 66 4485 * 1000 1000 * * 3092 1000 0 E 32 3210 * 4448 1296 * 3060 * * 2596 * * 3338 * 4195 * * * * * * 32 708 1366 * 619 1518 * * 3092 2358 0 V 33 * * * * 1810 * * * * 2398 2396 * * * * * 3857 1910 * * 33 0 * * * * * * 3092 0 0 E 34 * * 447 2781 * * * * * * * 3046 * * * * * * * * 34 0 * * * * * * 3092 0 0 L 35 * * * * * * * 2801 * 443 * * * * * * * 3046 * * 35 0 * * * * * * 3092 0 0 M 36 * * 4565 4710 * 4551 * 4266 2572 * 4643 3979 * 1954 4296 3857 3007 4299 * * 36 81 4196 * 0 * * * 3092 1000 0 G 37 * * 3333 * * 151 * * * * * * * * * * * * * * 37 0 * * * * * * 3092 0 0 M 38 4485 * * * * * * 4551 4832 2541 750 * * * 4565 * * * 3857 * 38 0 * * * * * * 3092 0 0 E 39 * * * 354 * * * 4565 * * * * * 3046 * * * 4196 * * 39 0 * * * * * * 3092 0 0 G 40 * * * * * 0 * * * * * * * * * * * * * * 40 0 * * * * * * 3092 0 0 F 41 * * * 1714 4643 * 4832 * 2651 * * * * * * * 2616 1748 * * 41 0 * * * * * * 3092 0 0 I 42 * * * * * * * 1467 * 3210 * * * * * * * 916 * * 42 0 * * * * * * 3092 0 0 K 43 3490 4414 3857 * * * 3979 4195 1350 * 3046 4551 * * * * 3859 4266 * * 43 0 * * * * * * 3092 0 0 D 44 2412 * 3049 4299 * * * * 3859 * * 4195 * 1379 * 2916 * * * * 44 0 * * * * * * 3092 0 0 Y 45 * * 3859 * * * * 3333 * * * 3046 * 4266 2916 * * 2815 * 1380 45 0 * * * * * * 3092 0 0 V 46 2916 * * * * * * 3244 * 2412 * * * * * * * 801 * * 46 0 * * * * * * 3092 0 0 V 47 3113 4448 2916 * * 2451 * * * * * * * * 4266 2168 2260 4643 * * 47 0 * * * * * * 3092 0 0 L 48 * * 2096 2826 4196 * 3859 * * 3086 * * * * * * 4299 1587 * * 48 0 * * * * * * 3092 0 0 W 49 * * * * 2054 * 4565 * * 3979 * * * * * * * * 775 3857 49 0 * * * * * * 3092 0 0 K 50 * * 3979 4195 * * * * 989 * * 3137 * 2803 3046 * * * * * 50 0 * * * * * * 3092 0 0 G 51 * * * * * 0 * * * * * * * * * * * * * * 51 0 * * * * * * 3092 0 0 K 52 * * * * * * * * 866 * * * * * 2337 * 3857 2438 * * 52 0 * * * * * * 3092 0 0 K 53 * * * 4266 * * * * 4643 * * * 1464 4565 2015 * 3859 * * 2419 53 0 * * * * * * 3092 0 0 I 54 * * * * * * * 718 * 2032 * * * * * * * 2761 * * 54 0 * * * * * * 3092 0 0 S 55 * * * * * * * * * * * * * * * 147 3370 * * * 55 0 * * * * * * 3092 0 0 A 56 363 * * * * * * * * * * * 2168 * * * * * * * 56 0 * * * * * * 3092 0 0 N 57 * * * * * * * * * * * 397 * * * 3046 3063 * * * 57 0 * * * * * * 3092 0 0 L 58 * * * * 3467 * * * 3046 655 * * * * * * * * * 2704 58 0 * * * * * * 3092 0 0 P 59 * * * 2916 * * * * * * * * 205 * * * * * * * 59 0 * * * * * * 3092 0 0 F 60 * * * * 1853 * * 3338 * 4195 * * * * * * * 2500 3046 1880 60 0 * * * * * * 3092 0 0 K 61 * 4266 * * * * * * 538 2800 * * * 3110 * * * * * * 61 0 * * * * * * 3092 0 0 V 62 * * * * * * * 2828 * * * * * * * * * 219 * * 62 0 * * * * * * 3092 0 0 Q 63 2053 * * 2526 * 4846 * * 3337 * * * * 1474 4414 4485 * * * * 63 0 * * * * * * 3092 0 0 F 64 * * * * 476 * * 2509 * 4299 * * * * * * * * * 4196 64 459 2987 2774 620 1517 * * 3092 1618 0 V 65 2792 * 3782 2515 4513 3784 * * * 4665 4051 4383 2740 * 3961 * * 2943 * * 65 109 * 3784 * * * 0 2968 0 1544 K 66 3079 * * * * 3568 * 2795 2611 3115 4269 * * 3605 * * 3949 2512 * * 66 317 4319 2767 0 * * 0 2875 1000 1669 E 67 3909 * 1688 1846 * * * * 2671 * * * 2413 * * * * * * * 67 0 * * * * * 0 2716 0 1928 I 68 * * 3536 * * 3466 * 2726 * 2965 * 3363 3666 * * 3257 * 1924 * * 68 0 * * * * 1927 440 2716 0 1928 E 69 3751 * 1990 1701 * 4132 * * * * * 3536 2164 * * * * * * * 69 0 * * * * * 0 2769 0 1718 G 70 3626 * 2663 * * 797 * * * * * * 3451 * * * 3410 * * * 70 0 * * * * * 0 2769 0 1718 R 71 * * 3410 3826 * 3626 * * 2493 * * * * 2316 1412 * * * * * 71 85 * 4132 * * * 0 2769 0 1718 G 72 3698 * 3852 3716 * 1075 * * 3346 * * * 3978 3581 * 4121 * * * * 72 449 2394 3698 0 * 487 1804 2752 1454 1931 P 73 3351 * * * * * 3683 * 2769 * * * 1435 * * 1701 * * * * 73 0 * * * * 476 1831 2999 0 1756 V 74 * * * 4051 3018 * * 4496 * * 2855 4353 3213 * 4256 * 3807 1502 * * 74 214 * 2857 * * 0 * 3078 0 1000 K 75 * * * * * * * * 262 * * * * * 2592 * * * * * 75 0 * * * * 0 * 2884 0 1294 F 76 * * * * 81 * * * * 4196 * * * * * * * * * * 76 0 * * * * * * 3092 0 0 F 77 * * * * 2334 * * 2447 3337 * * * * * 4485 2616 * 1683 * * 77 0 * * * * * * 3092 0 0 T 78 842 * * * * * * * * * 3046 * * * * * 4643 1831 * * 78 0 * * * * * * 3092 0 0 H 79 * * * * * * 0 * * * * * * * * * * * * * 79 0 * * * * * * 3092 0 0 L 80 * 3857 * * 4494 * * * * 380 3979 * * * * * * 4195 * * 80 0 * * * * * * 3092 0 0 K 81 3859 4195 * * * 3046 4414 * 1087 * * * * 4266 2429 * * * * * 81 0 * * * * * * 3092 0 0 E 82 * * 1770 700 * * * * * * * * 3453 * * * * * * * 82 0 * * * * * * 3092 0 0 D 83 * * 993 2510 4485 4299 * * * * * 3016 * 4296 * 4266 * * * * 83 0 * * * * * * 3092 0 0 E 84 * * * 0 * * * * * * * * * * * * * * * * 84 0 * * * * * * 3092 0 0 F 85 * * * * 1380 * * 3859 * 1925 3046 * * * * * * 2622 * * 85 0 * * * * * * 3092 0 0 E 86 3859 * 3685 306 * * * * * * * * * * * * 4494 * * * 86 0 * * * * * * 3092 0 0 L 87 3774 * * * 2554 * * 3154 3622 2793 * * * * * * * 1387 * 4780 87 0 * * * * * * 3009 0 0 I 88 * * * * * * * 1816 * 1626 * * * * * * * 1351 * * 88 0 * * * * * * 3009 0 0 D 89 * * 684 2766 * * * * * * * 2118 * * * * * * * * 89 0 * * 0 * * * 2344 0 0 //