HHsearch 1.5 NAME c7bdxE_ FAM FILE c7bdxE_ COM /bmm/www/servers/phyre2/HH/hhmake -i c7bdxE_.a3m DATE Sat Jul 10 08:36:28 2021 LENG 53 match states, 53 columns in multiple alignment FILT 6 out of 10 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 1.6 EVD 0.5357 4.9908 SEQ >ss_dssp CCSSCCCSCSTTCCCCCCCCHHHHHTSCCCBCSSCBCCCCCCCCCCCSCCCCC >sa_dssp EEEEEEDEDEEEDEEEEEEEEEDEEEEEECEEEEECDEEEEEEEEEEEEEEEE >ss_pred CHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCCCHHHHHC >ss_conf 93677751762212323378663010022322201135421366521055309 >Consensus nEFdriixxqxkSlkxsKStPDGxxKDRxxfmhHisLePvtcxPfxttkerqe >c7bdxE_ NEFDRIIENQEKSLKASKSTPDGTIKDRRLFXHHVSLEPITTVPFRTTKERQE >UniRef50_A4ZZ89(2273-2324:3337) BRCA2 (Fragment) n=2 Tax=Theria RepID=A4ZZ89_MONDO E=8e-13 s/c=1.44 id=62% cov=100% -EFDRAVENQAKSLKPSKSSPDGTMKDRRKLMHHISLKPVTCDPFSTAKEWRQ >UniRef50_Q864S8(2233-2285:3372) Breast cancer type 2 susceptibility protein homolog n=7 Tax=Eutheria RepID=BRCA2_FELCA E=8e-20 s/c=1.85 id=80% cov=102% NEFDRIIKNQEKSLKASKSTPDGIIKDRSLFMHHISLEPVTCGPFSTTKKRQE >UniRef50_Q8MKI9(2308-2360:3446) Brca2 protein n=20 Tax=Eukaryota RepID=Q8MKI9_CANFA E=3e-19 s/c=1.82 id=78% cov=102% NEFDRIIKNQETSLKASKSTPDGILKDRSLFMHHISLEPISCGPFRTTEERQE >UniRef50_Q8QFV6(2240-2290:3398) Breast cancer susceptibility protein n=5 Tax=Gallus gallus RepID=Q8QFV6_CHICK E=5e-13 s/c=1.48 id=56% cov=98% -EFEK-MKIPPKSVKPLKSTPDGIFKDRRKFMYHVPLKPVTCQPLGTTKERQE >UniRef50_P97929(2144-2381:3329) Breast cancer type 2 susceptibility protein homolog n=8 Tax=Muroidea RepID=BRCA2_MOUSE E=3e-70 s/c=0.29 id=69% cov=102% NEFDRIIESKGKSLTPSKSTPDGTVKDRSLFTHHMSLEPVTCGPFCSSKERQG # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * N 1 * * * * * * * * * * * 0 * * * * * * * * 1 0 * * * * * * 1316 0 0 E 2 * * * 0 * * * * * * * * * * * * * * * * 2 0 * * * * * * 1633 0 0 F 3 * * * * 0 * * * * * * * * * * * * * * * 3 0 * * * * * * 1633 0 0 D 4 * * 336 2267 * * * * * * * * * * * * * * * * 4 0 * * * * * * 1633 0 0 R 5 * * * * * * * * 2267 * * * * * 336 * * * * * 5 336 * 2267 * * * * 1633 0 0 I 6 2051 * * * * * * 399 * * * * * * * * * * * * 6 0 * * * * 0 * 1475 0 1000 I 7 * * * * * * * 733 * * 2267 * * * * * * 2390 * * 7 0 * * * * * * 1633 0 0 E 8 * * * 981 * * * * 1020 * * * * * * * * * * * 8 0 * * * * * * 1633 0 0 N 9 * * * * * * * 2267 * * * 705 * * * 2483 * * * * 9 0 * * * * * * 1633 0 0 Q 10 * * * * * * * * 2483 * * * 2267 705 * * * * * * 10 0 * * * * * * 1633 0 0 E 11 2390 * * 1242 * 2483 * * * * * * 2267 * * * * * * * 11 0 * * * * * * 1633 0 0 K 12 * * * * * * * * 239 * * * * * * * 2712 * * * 12 0 * * * * * * 1633 0 0 S 13 * * * * * * * * * * * * * * * 0 * * * * 13 0 * * * * * * 1633 0 0 L 14 * * * * * * * * * 336 * * * * * * * 2267 * * 14 0 * * * * * * 1633 0 0 K 15 * * * * * * * * 284 * * * * * * * 2483 * * * 15 0 * * * * * * 1633 0 0 A 16 1242 * * * * * * * * * * * 793 * * * * * * * 16 0 * * * * * * 1633 0 0 S 17 * * * * * * * * * 2267 * * * * * 336 * * * * 17 0 * * * * * * 1633 0 0 K 18 * * * * * * * * 0 * * * * * * * * * * * 18 0 * * * * * * 1633 0 0 S 19 * * * * * * * * * * * * * * * 0 * * * * 19 0 * * * * * * 1633 0 0 T 20 * * * * * * * * * * * * * * * 2390 305 * * * 20 0 * * * * * * 1633 0 0 P 21 * * * * * * * * * * * * 0 * * * * * * * 21 0 * * * * * * 1633 0 0 D 22 * * 0 * * * * * * * * * * * * * * * * * 22 0 * * * * * * 1633 0 0 G 23 * * * * * 0 * * * * * * * * * * * * * * 23 0 * * * * * * 1633 0 0 T 24 * * * * * * * 1020 * * * * * * * * 981 * * * 24 0 * * * * * * 1633 0 0 I 25 * * * * 2267 * * 1889 * 2712 2390 * * * * * * 2483 * * 25 0 * * * * * * 1633 0 0 K 26 * * * * * * * * 0 * * * * * * * * * * * 26 0 * * * * * * 1633 0 0 D 27 * * 0 * * * * * * * * * * * * * * * * * 27 0 * * * * * * 1633 0 0 R 28 * * * * * * * * * * * * * * 0 * * * * * 28 0 * * * * * * 1633 0 0 R 29 * * * * * * * * * * * * * * 901 1107 * * * * 29 0 * * * * * * 1633 0 0 L 30 * * * * * * * * 1328 733 * * * * * * * * * * 30 0 * * * * * * 1633 0 0 F 31 * * * * 305 * * * * 2390 * * * * * * * * * * 31 0 * * * * * * 1633 0 0 X 32 * * * * * * * * * * 330 * * * * * 2291 * * * 32 0 * * * * * * 1637 0 0 H 33 * * * * * * 336 * * * * * * * * * * * * 2267 33 0 * * * * * * 1633 0 0 H 34 * * * * * * 0 * * * * * * * * * * * * * 34 0 * * * * * * 1633 0 0 V 35 * * * * * * * 1070 * * 2483 * * * * * * 1536 * * 35 0 * * * * * * 1633 0 0 S 36 * * * * * * * * * * * * 2267 * * 336 * * * * 36 0 * * * * * * 1633 0 0 L 37 * * * * * * * * * 0 * * * * * * * * * * 37 0 * * * * * * 1633 0 0 E 38 * * * 733 * * * * 1328 * * * * * * * * * * * 38 0 * * * * * * 1633 0 0 P 39 * * * * * * * * * * * * 0 * * * * * * * 39 0 * * * * * * 1633 0 0 I 40 * * * * * * * 1787 * * * * * * * * * 494 * * 40 0 * * * * * * 1633 0 0 T 41 * * * * * * * * * * * * * * * 2712 239 * * * 41 0 * * * * * * 1633 0 0 T 42 * 213 * * * * * * * * * * * * * * 2866 * * * 42 0 * * * * * * 1633 0 0 V 43 * * 2390 * * 1107 * * * * * * * 2267 * * * 2866 * * 43 0 * * * * * * 1633 0 0 P 44 * * * * * * * * * * * * 0 * * * * * * * 44 0 * * * * * * 1633 0 0 F 45 * * * * 336 * * * * 2267 * * * * * * * * * * 45 0 * * * * * * 1633 0 0 R 46 * 2483 * * * 2267 * * * * * * * * 1787 1627 * * * * 46 0 * * * * * * 1633 0 0 T 47 * * * * * * * * * * * * * * * 2483 284 * * * 47 0 * * * * * * 1633 0 0 T 48 2390 * * * * * * * * * * * * * * 2483 666 * * * 48 0 * * * * * * 1633 0 0 K 49 * * * 2712 * * * * 239 * * * * * * * * * * * 49 0 * * * * * * 1633 0 0 E 50 * * * 206 * * * * 2912 * * * * * * * * * * * 50 0 * * * * * * 1633 0 0 R 51 * * * * * * * * * * * * * * 305 * * * 2390 * 51 0 * * * * * * 1633 0 0 Q 52 * * * * * * * * * * * * * 305 2390 * * * * * 52 0 * * * * * * 1633 0 0 E 53 * * * 666 * 2483 * * * * * * * 2390 * * * * * * 53 0 * * 0 * * * 1633 0 0 //