HHsearch 1.5 NAME c7asyA_ FAM FILE c7asyA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c7asyA_.a3m DATE Mon Jan 4 13:09:51 2021 LENG 33 match states, 33 columns in multiple alignment FILT 2 out of 6 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 1.1 EVD 0.4925 2.7077 SEQ >ss_dssp CCCTHHHHTHHHHHHHHHHHHHHHHHTCCSSCC >sa_dssp EECEEEEEEDDEEEDDDDEEEEDEEEEDEEEEE >ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >ss_conf 900488799999984278999999975107889 >Consensus rrclxlslxsflxvagattlfcllhfgvigpqr >c7asyA_ RRCLFLSLFSFLIVAGATTLFCLLHFGVIGPQR >UniRef50_UPI0001554DA9(124-153:156) PREDICTED: similar to tumor necrosis factor alpha, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI0001554DA9 E=3e-07 s/c=1.87 id=87% cov=94% --CLCLSLVSFLLVAGATTLFCLLHFGVIGPQ- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * R 1 * * * * * * * * * * * * * * 0 * * * * * 1 0 * * * * * * 1000 0 0 R 2 * * * * * * * * * * * * * * 0 * * * * * 2 0 * * * * * * 1000 0 0 C 3 * 0 * * * * * * * * * * * * * * * * * * 3 0 * * * * * * 1072 0 0 L 4 * * * * * * * * * 0 * * * * * * * * * * 4 0 * * * * * * 1072 0 0 F 5 * 1000 * * 1000 * * * * * * * * * * * * * * * 5 0 * * * * * * 1072 0 0 L 6 * * * * * * * * * 0 * * * * * * * * * * 6 0 * * * * * * 1072 0 0 S 7 * * * * * * * * * * * * * * * 0 * * * * 7 0 * * * * * * 1072 0 0 L 8 * * * * * * * * * 0 * * * * * * * * * * 8 0 * * * * * * 1072 0 0 F 9 * * * * 1000 * * * * * * * * * * * * 1000 * * 9 0 * * * * * * 1072 0 0 S 10 * * * * * * * * * * * * * * * 0 * * * * 10 0 * * * * * * 1072 0 0 F 11 * * * * 0 * * * * * * * * * * * * * * * 11 0 * * * * * * 1072 0 0 L 12 * * * * * * * * * 0 * * * * * * * * * * 12 0 * * * * * * 1072 0 0 I 13 * * * * * * * 1000 * 1000 * * * * * * * * * * 13 0 * * * * * * 1072 0 0 V 14 * * * * * * * * * * * * * * * * * 0 * * 14 0 * * * * * * 1072 0 0 A 15 0 * * * * * * * * * * * * * * * * * * * 15 0 * * * * * * 1072 0 0 G 16 * * * * * 0 * * * * * * * * * * * * * * 16 0 * * * * * * 1072 0 0 A 17 0 * * * * * * * * * * * * * * * * * * * 17 0 * * * * * * 1072 0 0 T 18 * * * * * * * * * * * * * * * * 0 * * * 18 0 * * * * * * 1072 0 0 T 19 * * * * * * * * * * * * * * * * 0 * * * 19 0 * * * * * * 1072 0 0 L 20 * * * * * * * * * 0 * * * * * * * * * * 20 0 * * * * * * 1072 0 0 F 21 * * * * 0 * * * * * * * * * * * * * * * 21 0 * * * * * * 1072 0 0 C 22 * 0 * * * * * * * * * * * * * * * * * * 22 0 * * * * * * 1072 0 0 L 23 * * * * * * * * * 0 * * * * * * * * * * 23 0 * * * * * * 1072 0 0 L 24 * * * * * * * * * 0 * * * * * * * * * * 24 0 * * * * * * 1072 0 0 H 25 * * * * * * 0 * * * * * * * * * * * * * 25 0 * * * * * * 1072 0 0 F 26 * * * * 0 * * * * * * * * * * * * * * * 26 0 * * * * * * 1072 0 0 G 27 * * * * * 0 * * * * * * * * * * * * * * 27 0 * * * * * * 1072 0 0 V 28 * * * * * * * * * * * * * * * * * 0 * * 28 0 * * * * * * 1072 0 0 I 29 * * * * * * * 0 * * * * * * * * * * * * 29 0 * * * * * * 1072 0 0 G 30 * * * * * 0 * * * * * * * * * * * * * * 30 0 * * * * * * 1072 0 0 P 31 * * * * * * * * * * * * 0 * * * * * * * 31 0 * * * * * * 1072 0 0 Q 32 * * * * * * * * * * * * * 0 * * * * * * 32 0 * * * * * * 1072 0 0 R 33 * * * * * * * * * * * * * * 0 * * * * * 33 0 * * 0 * * * 1000 0 0 //