HHsearch 1.5 NAME c7ardo_ FAM FILE c7ardo_ COM /bmm/www/servers/phyre2/HH/hhmake -i c7ardo_.a3m DATE Sat Dec 11 08:33:19 2021 LENG 83 match states, 83 columns in multiple alignment FILT 33 out of 37 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.9 EVD 0.4711 1.4472 SEQ >ss_dssp CCSSCCCCCCSCHHHHHHTTCCGGGCSSCHHHHHHHHHHHHHSTTTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC >sa_dssp DEECEEDECDBDEEDBDECEADEEDCDDAACCBCDCCEBCEEDEEDCEEEADECDEDCEECDEDBDDCEDCCDDBCDDDEEEE >ss_pred CCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCC >ss_conf 98889873217999999629998880666999999999964078985116668999898417999999999999999973139 >Consensus xxxfPxrxMxaTxeEMxxakiPlxxRDyCAHxlixlxkCrxxxxxPxxxxCxhexHxyxxCeyxDyxxRxkexerekrxxxlx >c7ardo_ ADRFPPPKMVATQEEMDNADIPYKYRDYCAHLIIDFKECRYGHPLTWRINCAHELHHYNKCSYIEFKRRVAIAIEEKKRRGLM >UniRef50_UPI00006A6972(31-114:117) PREDICTED: similar to mitochondrial complex I subunit NDUFB7 n=1 Tax=Ciona intestinalis RepID=UPI00006A6972 E=9e-15 s/c=0.97 id=37% cov=94% ----PVREMVATSEEMDKAALRREERDYCAHMFMDIMKCRREW-FPELYNCRPLIEKYQHCTvndikhrMLEYERTKRLMAREKQRLAL- >UniRef50_Q42155(8-82:103) NADH dehoydrogenase n=18 Tax=Viridiplantae RepID=Q42155_ARATH E=8e-13 s/c=1.00 id=39% cov=90% ------KKMIATQEEMSAAKIALGSRDMCAHLLIPLNKCRQaEFYLPWK--CEDERHVYEKCEYELVMEKMLAMKKIREEEAL- >UniRef50_Q6GPC4(29-102:116) MGC80505 protein n=3 Tax=Xenopus RepID=Q6GPC4_XENLA E=1e-11 s/c=0.96 id=32% cov=90% ---LPERVMVASQEQMNLAQVPLQQRDYCAHHLITLMKCKRDMW-PNFLACKHERHEWDQCQHEDYVQRMKQYERERR----- >UniRef50_B7PUG2(44-107:132) NADH:CoQ oxidoreductase subunit B18, putative n=2 Tax=Ixodidae RepID=B7PUG2_IXOSC E=1e-10 s/c=1.06 id=43% cov=78% ------REMVATEAELESARIPPKSRNYCAHKLIEFKACRKDH-FPLVYRCQHEKHEYDDCLYQDYLIRYK------------ >UniRef50_B8C5Z0(12-82:87) Predicted protein n=1 Tax=Thalassiosira pseudonana RepID=B8C5Z0_THAPS E=6e-07 s/c=0.78 id=26% cov=87% ------PKKDQNLQAIKDARTPLAWRDTCSHILVDLNKCRRETWWN-PNKCEHARHVYEECEYNAYLQRIEAKVQLDK----- >UniRef50_Q4FWA3(46-109:225) Putative uncharacterized protein n=7 Tax=Trypanosomatidae RepID=Q4FWA3_LEIMA E=1e-05 s/c=0.80 id=30% cov=76% ------RPMTVSRDFMELNQVPIVYRDHCVHRWIPFNRCMRNLkPVTWGTvNCHEFEESWMVCRAHETYR--------------- >UniRef50_B9W7T8(6-77:77) Nadh-ubiquinone oxidoreductase b18 subunit, putative n=4 Tax=Saccharomycetales RepID=B9W7T8_CANDC E=0.0002 s/c=0.65 id=25% cov=88% ---FPP---LLSQDDCQKYKVPLKWRDRCAAYFALYQTCIIRQSANSSVSCKHDKHAWEECENLDLIRRKQELKEASQ----- >UniRef50_UPI00003C0989(35-100:121) PREDICTED: similar to CG5548-PA n=1 Tax=Apis mellifera RepID=UPI00003C0989 E=2e-15 s/c=1.26 id=36% cov=81% ------RVMPLSEEEMIAAKIPHDLRDYCAHYYLDYIRC-YMEKFPFVTRCVTEIHNYQKCEYDDYILRGKEY---------- >UniRef50_C4Q6L0(27-108:116) Expressed protein n=2 Tax=Schistosoma RepID=C4Q6L0_SCHMA E=1e-14 s/c=0.99 id=31% cov=93% -DGFPEgrnrREFILTEEEMIAAGLKPYERDYCAHLLLAFRKCGDEHVIPALY-CSDLKHKYRHCKESDLLHRMKEYERERR----- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * A 1 0 * * * * * * * * * * * * * * * * * * * 1 0 * * * * * * 1202 0 0 D 2 * * 0 * * * * * * * * * * * * * * * * * 2 0 * * * * * * 1767 0 0 R 3 * * * * * 1320 * * * * * * * * 738 * * * * * 3 0 * * * * * * 1767 0 0 F 4 * * * * 276 * * * * 2521 * * * * * * * * * * 4 0 * * * * * * 2715 0 0 P 5 * * * * * * * * * * * * 0 * * * * * * * 5 0 * * * * * * 3086 0 0 P 6 * * * 2425 * * * * * * * * 851 * * * * 1947 * * 6 530 3370 2248 2000 415 * * 3215 1000 0 P 7 * * * * * * * * 3068 * * * 2682 * 464 * * * * * 7 0 * * * * * 0 3873 0 1512 K 8 * * * 1541 * * * * 1689 * * 4654 3230 * * * * 2323 * * 8 0 * * * * * 0 3873 0 1512 M 9 * * * * 4480 * * 4158 3896 4821 387 * * * * * 4958 * * * 9 0 * * * * 0 * 3932 0 1512 V 10 * * 4033 * * * 4304 2231 2448 3507 * * 4813 5080 * * 4040 1846 * * 10 43 5080 * 1000 1000 * * 4129 1000 0 A 11 804 * * * * * * 4416 * 2485 * * * 4218 * * * 2758 * * 11 0 * * * * * * 4205 0 0 T 12 * * * * * * * * 4259 * * 4314 * * * 1357 980 * * * 12 0 * * * * * * 4271 0 0 Q 13 5734 * * 2081 * * 5392 * * 3083 * * 4667 1593 3667 4043 5205 5586 4483 * 13 0 * * * * * * 4271 0 0 E 14 3668 * 2889 792 * * * * 5368 * * * * 2787 * * 4649 * * * 14 0 * * * * * * 4271 0 0 E 15 4314 * 3685 445 4140 * * * * * * * * 3636 * * * * * * 15 0 * * * * * * 4271 0 0 M 16 5586 3715 * * * * * 4314 * 2751 551 * * * * 5527 * * * * 16 0 * * * * * * 4271 0 0 D 17 4092 * 2567 2139 * * * 3905 3001 * 4204 3870 * 4288 3138 5102 * 4742 * * 17 0 * * * * * * 4271 0 0 N 18 1603 * 2554 4333 * * * * 2853 3598 * 4898 * 3867 * 2969 * * * * 18 0 * * * * * * 4271 0 0 A 19 592 * * * * * 4298 * 5325 4477 * 3060 * * * * * * 4483 4288 19 0 * * * * * * 4271 0 0 D 20 4043 * 3985 5368 * 4762 4649 * 1102 * 5505 5325 * 3150 2739 * * * * * 20 0 * * * * * * 4271 0 0 I 21 * * * * * * * 1570 * 1601 * * * * * * 4314 1819 * * 21 0 * * * * * * 4271 0 0 P 22 5102 * * * * * * * 3616 5236 * * 373 * 3463 * * * * * 22 0 * * * * * * 4271 0 0 Y 23 * * * * * * 5064 4140 4259 893 * * 2329 * 4043 * * * * 3985 23 0 * * * * * * 4271 0 0 K 24 1954 * 2964 2972 * 3610 4368 * 2462 * * * * 4161 * 5325 * 4140 * 4762 24 0 * * * * * * 4271 0 0 Y 25 3947 * 5205 2456 3178 * * * 4259 4061 * * * 3824 * 4017 * * 2991 2029 25 0 * * * * * * 4271 0 0 R 26 * * * * * * * * * * * * * * 77 * * * 4259 * 26 0 * * * * * * 4271 0 0 D 27 * * 109 * * 4649 * * * * * 4937 * * * * * * * * 27 0 * * * * * * 4271 0 0 Y 28 4667 * * * 3347 * 4140 * * * 5102 5505 * 4175 3300 5527 4314 * * 928 28 0 * * * * * * 4271 0 0 C 29 * 0 * * * * * * * * * * * * * * * * * * 29 0 * * * * * * 4271 0 0 A 30 356 * * * * * * * * * * * * * * 3094 4477 4140 * * 30 0 * * * * * * 4271 0 0 H 31 3056 * 3233 * * * 508 * * * * 5505 * * 5392 5363 * * * * 31 30 5586 * 5129 42 * * 4271 1000 0 L 32 * * * * 3569 * 3313 4314 4065 1561 2875 * * * 4140 * 3441 * * 3624 32 0 * * * * * * 4271 0 0 I 33 5511 * * * 3160 * * 4898 * 616 * * * * * * * * 4140 3016 33 0 * * * * * * 4271 0 0 I 34 4288 * * * * * * 970 * 2380 3314 * * * 4477 * * 3313 * * 34 0 * * * * * * 4271 0 0 D 35 4088 * 2006 3558 * * * * 3900 4288 * 4441 1722 * 5057 3572 5272 * * * 35 0 * * * * * * 4271 0 0 F 36 * * * * 2646 * 3900 4043 * 1050 * * * * * * * 4259 * 2494 36 0 * * * * * * 4271 0 0 K 37 * * * 4259 * * * 5064 3383 5057 2736 1515 * 3774 2522 * * * * 4477 37 0 * * * * * * 4271 0 0 E 38 3404 * 3840 3479 * 4441 * * 1196 5363 * * * * 2636 5205 4288 * * * 38 0 * * * * * * 4271 0 0 C 39 * 0 * * * * * * * * * * * * * * * * * * 39 80 5397 5064 0 * * * 4271 1000 0 R 40 * * * * * 4703 * 3020 4112 4582 4107 * * 4457 655 * * * * * 40 149 3349 * 0 * 0 * 4261 1884 1000 Y 41 3656 * 4045 4491 * * 6609 4288 2565 5077 * * * 5102 1702 4415 3970 * * 3207 41 128 3558 * 0 * * * 4271 1555 0 G 42 * * 1983 2277 * 4124 * * * * 5064 2238 * 3476 4288 * 3315 * * * 42 218 3941 3732 0 * * * 4271 1617 0 H 43 * * * 4896 3491 * 2594 * 5280 3521 5198 2886 * 4181 5545 3981 3330 5132 3837 3342 43 664 3583 1808 0 * 0 * 4175 1563 1507 P 44 4202 * * * 5062 4698 * * 3204 * 4914 * 2656 * 5102 3915 * 4281 2670 1874 44 63 * 4545 * * 0 * 3937 0 2760 L 45 3040 * * * 1465 * * 4751 5332 3100 3099 * 4416 * 4471 * * 3684 4290 * 45 28 5684 * 0 * 0 * 4269 1000 1000 T 46 * * * * 4483 * * * * * * 2998 494 * * 5077 3470 * * * 46 74 * 4314 * * * * 4271 0 0 W 47 3576 * * 3973 2316 * 5305 * * 3633 * 4088 * * * 4194 * * 1210 * 47 114 * 3714 * * 0 * 4178 0 1000 R 48 4169 * * 5192 4015 3227 * * 2518 2902 * 3694 4176 * 3882 3383 * 2799 * * 48 430 * 1957 * * * 0 4273 0 1792 I 49 * * * * 4051 * 3237 4328 * 3627 * 3559 * * * * 2559 3718 * 1425 49 204 3665 4229 0 * 2231 345 4035 1000 2406 N 50 2838 * * * 4296 * 3817 * 2311 4060 * 1945 * * 2790 3786 * * * * 50 0 * * * * 83 4160 4002 0 2474 C 51 * 0 * * * * * * * * * * * * * * * * * * 51 0 * * * * * 0 4205 0 1000 A 52 3552 * 4528 2262 * 5222 2766 * 2468 * 5176 4380 * 4913 3270 4724 * 4104 * * 52 0 * * * * * 0 4205 0 1000 H 53 * * 2998 3258 * 4528 996 * * * * 5251 3959 4185 4380 * 4962 * * * 53 0 * * * * * 0 4205 0 1000 E 54 4138 * 4257 687 4186 * * * * 3291 * * * 3151 * * * * * * 54 0 * * * * * 0 4205 0 1000 L 55 4334 * * 4186 * * * 3375 1780 3972 3629 * * * 1461 * * * * * 55 0 * * * * * 0 4205 0 1000 H 56 * * * 2601 * 4528 337 * * * * * * * * * * * * * 56 0 * * * * * 0 4205 0 1000 H 57 1887 * 4185 2026 * * 4899 * 3291 * * 3808 * * * 3622 4351 3447 * * 57 0 * * * * * 0 4205 0 1000 Y 58 4334 * * * * * * * * * * * * * * * * * 2007 511 58 0 * * * * * 0 4205 0 1000 N 59 * * 2517 1551 * * 4668 * 4380 5538 3607 3972 * 3375 4724 4334 * * * 4456 59 0 * * * * 0 * 4205 0 1000 K 60 * * 4899 2532 * 3924 2410 * 1824 * 3711 * * 4359 * * 4361 4208 * 5100 60 0 * * * * * * 4217 0 0 C 61 * 0 * * * * * * * * * * * * * * * * * * 61 0 * * * * * * 4217 0 0 S 62 * * * 1279 * * * * 4807 4899 4632 4314 * 2133 3303 4884 3945 * * * 62 50 4863 * 2807 222 * * 4217 1000 0 Y 63 4208 * 5481 3717 5203 * 4200 * * 4314 4863 4262 * 4405 * * * 3630 * 997 63 0 * * * * * * 4217 0 0 I 64 4207 * 2045 2076 * * 3293 4791 4941 3129 * 3593 * 4909 5084 4804 * * * * 64 0 * * * * * * 4208 0 0 E 65 4259 * 566 2227 * * * * * 4826 * * * * 5403 * * * * * 65 0 * * * * * * 4208 0 0 F 66 * * * * 1936 * 4432 5029 * 3508 * * * * * * 4200 4826 * 1046 66 0 * * * * * * 4208 0 0 K 67 * * * 4766 * * * 2360 2748 1872 4164 * * 5185 * * * 2901 * 2951 67 0 * * * * * * 4208 0 0 R 68 * * 4392 4826 * * 3912 4909 * 2283 3083 * * 3268 1556 * * * * 4318 68 0 * * * * * * 4208 0 0 R 69 * * * * * * * * 4782 * * * * 4270 195 * 4701 * * * 69 0 * * * * * * 4049 0 0 V 70 * * * * 4514 4938 * 3278 3010 * 1207 * * 4354 * * * 2473 * 4866 70 0 * * * * * * 4049 0 0 A 71 3754 * * 4193 * * * 5020 728 3862 * * * 4188 3146 * * * * * 71 0 * * * * * * 4049 0 0 I 72 2988 * 3619 844 * * * 3706 3491 4663 * * * 5033 * * * * * * 72 0 * * * * * * 4032 0 0 A 73 3706 * * * 2684 * * * 2788 2573 2871 * * * * * * * * 1651 73 0 * * * * * * 4032 0 0 I 74 4543 * 3955 1040 * * 4862 3581 3270 * * * * 5138 * 3382 * 4052 * * 74 0 * * * * * * 3914 0 0 E 75 * * * 2021 * * * * 2910 * * * * 3499 910 * * * * * 75 0 * * * * * * 3914 0 0 E 76 3987 * * 859 * * * 3792 * 2233 * * * 4778 5235 * 4732 * * * 76 0 * * * * * * 3914 0 0 K 77 * * 3279 * * * * * 972 * * 4728 * * 1817 3925 * * * * 77 0 * * * * * * 3892 0 0 K 78 4657 * * 3007 * * * * 2378 3879 * * * 3157 1109 * * * * * 78 0 * * * * * * 3881 0 0 R 79 2322 * * 2801 * * * * 3770 2284 * * * 3049 1960 * * * * * 79 0 * * * * * * 3201 0 0 R 80 * * * 3459 * * * * 1618 3060 * * * * 1109 * * * * * 80 0 * * * * * * 3125 0 0 G 81 1160 * * * * 856 * * * * * * * * * * * * * * 81 0 * * * * * * 2287 0 0 L 82 * * * * * * * * * 0 * * * * * * * * * * 82 0 * * * * * * 2072 0 0 M 83 * * * * * * * 1000 * * 1000 * * * * * * * * * 83 0 * * 0 * * * 1202 0 0 //