HHsearch 1.5 NAME c7ardX_ FAM FILE c7ardX_ COM /bmm/www/servers/phyre2/HH/hhmake -i c7ardX_.a3m DATE Sat Dec 11 08:34:42 2021 LENG 99 match states, 99 columns in multiple alignment FILT 28 out of 32 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.1 EVD 0.3795 -2.7828 SEQ >ss_dssp CCCCCCHHHHHHTHHHHHHHCHHHHHHHHHHHHHCCSTTTTHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTTSCSGGGHHHHHHHHHHSCTTC >sa_dssp EEEDBEDCCCDBADDABDECBDECDDDBEEBDEEDEEEEDAEECCDDCCECBCEACECACEEADDDADCAAECAEEDDCECEEADEDBDDACEDBDCEE >ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC >ss_conf 986732569999899999983055599999861389979999986999999999999999864499999999999703410420798999887367779 >Consensus xxxvxtSaxLxAxaxhigxxCxxxnxeFMlCkxexxdPrxCLxEGxxVTxCaxxxxrxixxxCxxefxxyxxCLdxxxxxfxxCRkxQxafdxxxxxxx >c7ardX_ VARVPYSHELYAMAKHIVFRNEKEHNAILECKAQHDWPEDCKPESEAIVRATNKLFQDIMQKAPEEFKDYAKCLDWYGLKFSKCREKQAAFEAAFPLSE >UniRef50_A9TBG6(11-105:106) Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TBG6_PHYPA E=2e-28 s/c=1.34 id=31% cov=97% -APITTSAVLMSSSKHIASKCGAENRAFLDCKKNDPNPEKCLQKGQNVTQCVISLLRELNTKCPKAMESYTKCMDYYSNEFELCRKEQREFEASCP--- >UniRef50_C4WYG2(17-112:177) ACYPI007848 protein n=17 Tax=Neoptera RepID=C4WYG2_ACYPI E=3e-16 s/c=0.89 id=27% cov=95% VEEVPISSPgLRAAAHHIGKYCLDVNDEFMMCKQETKDPRKCLNEGKTVTSCALEFFRKLKGNCFDEFQIYSNCIDKSSsrMDFEPCRKTQAVYDK---- -- >UniRef50_A8Q7M8(29-111:182) NADH-ubiquinone oxidoreductase 19 kDa subunit, putative n=3 Tax=Chromadorea RepID=A8Q7M8_BRUMA E=8e-08 s/c=0.70 id=22% cov=83% -----------AVIPYMHRACEREVKDFMLRRQETEDPRLSLREGQALTACGIKFLQALKKVCNENVDRYADCIDHRTSKLyiTPCREQQRRLD------ - >UniRef50_A5DRX5(33-122:170) NADH-ubiquinone oxidoreductase 20.8 kDa subunit n=3 Tax=Saccharomycetales RepID=A5DRX5_LODEL E=3e-27 s/c=1.36 id=26% cov=90% -----TSAPLLSASFFIGDRCKPYNDDFMLCKDEHNGGEiDCLKEGRRVTRCAISVLKDINKHCFDEFKLHYECLEQNNQYFSRCRASEGVLSK------ >UniRef50_A4S2A9(11-106:106) Predicted protein n=3 Tax=Mamiellales RepID=A4S2A9_OSTLU E=3e-23 s/c=1.14 id=33% cov=98% ---VPASAMLFAVHKHLQTRCAEKTSAFLKCKKGDQDPEKCLRQGAAMTGCLVEVLRDLKATCGDELNAYAECLDYRSNNFEKCRREQEAFETKCSLGK >UniRef50_UPI000180B56E(49-137:192) PREDICTED: similar to NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8 n=1 Tax=Ciona intestinalis RepID=UPI000180B56E E=7e-23 s/c=1.21 id=20% cov=89% ------SHVLKASAFQYANECNEVNKEFMLCREEEMDPRKCLKYNIKVSDCAENFFRKMTTACADEIVAFGKCLERdHKRSFVYCRDEQVKFDR------ >UniRef50_D0NBZ9(18-102:116) Putative uncharacterized protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0NBZ9_PHYIN E=2e-17 s/c=1.05 id=21% cov=86% ---------LTCAARILAHECADANLEFMRCKQRDANPRTCLVQGEKVTAAVLKTLREVETNCGETYSAYKKALKKNWHRIDETRKEQAALEE------ >UniRef50_D2VD48(9-100:118) NADH-ubiquinone oxidoreductase n=1 Tax=Naegleria gruberi RepID=D2VD48_NAEGR E=4e-16 s/c=0.93 id=23% cov=92% ---IDSSAVIAALAPALLTKCSTENTEYMKCKSKSENPEDCLKESINCRKCVFSLASEFMNSpCQPKFSTLVECLRKREYDYKDCYPQRSAFES------ >UniRef50_Q54P46(5-95:104) NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 n=1 Tax=Dictyostelium discoideum RepID=NDUA8_DICDI E=7e-16 s/c=0.93 id=24% cov=92% -----TRAELVAQRDGVWAVCGEVFEAYEKCRmEKGSDPELCLRESTAVVGCSQKVMREIVKNCQKELNESVKCIEENNMRTIPCEEENKAFNECF---- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * V 1 * * * * * * * * * * * * * * * * * 0 * * 1 0 * * * * * * 1660 0 0 A 2 593 * * 1569 * * * * * * * * * * * * * * * * 2 0 * * * * * * 2073 0 0 R 3 * * * 1771 * * * * * * * * 1845 * 1222 * * * * * 3 0 * * * * * * 2212 0 0 V 4 * * * * * * * 1210 * * * * * * * * * 817 * * 4 0 * * * * * * 2858 0 0 P 5 * * 2412 * * * * * * * * * 551 * * * 2946 * * * 5 0 * * * * * * 2858 0 0 Y 6 4021 * * * * * * 4514 * * * * * * * 1808 1058 * * 2958 6 0 * * * * * * 3819 0 0 S 7 * * * * * * * * * * * * * * 3744 188 4401 * * * 7 0 * * * * * * 3925 0 0 H 8 529 * * * * * 2483 * * * * * * * * 3511 * 4633 * * 8 0 * * * * * * 3964 0 0 E 9 5004 * * 2383 * * * * * * 4150 * 1952 * * * 4545 1399 * 4633 9 55 4745 * 0 * * * 3964 1000 0 L 10 * * * * * * * 3269 * 158 * * * * * * * * * * 10 0 * * * * * * 4238 0 0 Y 11 3429 * * * 4486 * 4695 * 2633 2961 3335 * * * 3289 * 2972 4028 * 2794 11 0 * * * * * * 4238 0 0 A 12 452 4006 * * * * * * * * * * * * * 2274 * * * * 12 0 * * * * * * 4339 0 0 M 13 1296 * * * * 2589 * * * 3997 3368 * * 4117 * 3103 * 3427 * * 13 0 * * * * * * 4339 0 0 A 14 707 * * * * * 4616 4259 * * * * * * 4117 2077 * * * * 14 0 * * * * * * 4339 0 0 K 15 * * 4117 * 2477 * 3177 4017 2695 * * * 3122 * 3152 * * 4758 * 2542 15 0 * * * * * * 4339 0 0 H 16 3997 * * * 2481 4117 982 4006 * * * * * 4338 * * * * * 3598 16 0 * * * * * * 4339 0 0 I 17 * * * * 5188 * * 1684 * 1502 4259 * * * * * * 3213 * 2754 17 0 * * * * * * 4339 0 0 V 18 2548 * * * * 946 4259 * * 3997 * * * 4616 * * * 3368 4117 * 18 0 * * * * * * 4339 0 0 F 19 2810 * 3635 * 3368 * 4006 4933 2137 * * 3146 * 5002 4259 4112 3273 * * * 19 0 * * * * * * 4339 0 0 R 20 4259 * * 3162 4767 * 5002 * 2649 * * * * 3897 1805 * 5292 4117 * 2536 20 0 * * * * * * 4339 0 0 N 21 4314 147 * * * * * * * * * 4423 * * * * * * * * 21 0 * * * * * * 4339 0 0 E 22 3279 * 2858 1800 * 3444 * * 2744 5314 4933 4338 * 4957 5129 3997 * * * * 22 0 * * * * * * 4339 0 0 K 23 3522 * 2755 2072 * * * * 2539 * * 4767 3540 4136 3722 * 3997 * 4758 * 23 0 * * * * * * 4339 0 0 E 24 3616 * 4733 1554 3403 * * * 4616 * * * 3761 4090 * * * 2404 * 3579 24 0 * * * * * * 4339 0 0 H 25 * * * * 3393 * 3368 * * * * 620 * * * 3962 4616 4259 * * 25 0 * * * * * * 4339 0 0 N 26 * * 2378 3069 * * 5269 * 1922 4006 4933 2962 * * 4868 4616 3319 * * * 26 0 * * * * * * 4339 0 0 A 27 1931 * 2154 1073 * * * * * * * * * * * * 4733 * * * 27 0 * * * * * * 4339 0 0 I 28 4314 * * * 353 * * 4423 * * * * * * * * * * * 3056 28 0 * * * * * * 4339 0 0 L 29 * * * 4117 * * * 4733 * 2436 578 * * * * * * 4314 * * 29 0 * * * * * * 4339 0 0 E 30 * * 4868 3368 * * * * 2178 1017 5314 * * 3917 4006 * * * * * 30 0 * * * * * * 4339 0 0 C 31 * 136 * * * * * * 4733 * * * * * 4259 * * * * * 31 0 * * * * * * 4339 0 0 K 32 * * * * * * 4767 * 869 * * * * 4957 1382 * * * * * 32 86 4117 * 0 * * * 4339 1000 0 A 33 3759 * 5449 2863 * 4314 * * 2579 * * 5129 * 2214 4150 3997 * * 4386 2865 33 0 * * * * * * 4339 0 0 Q 34 * * * 763 * 4616 * * 2365 * * 3900 * 4423 4006 * * * * * 34 46 * 4999 * * * * 4339 0 0 H 35 4917 * 2529 2941 * 4094 2687 * * 3559 * 4022 * * * 3429 2249 * * * 35 49 4917 * 1000 1000 0 * 4321 1000 1000 D 36 4006 * 3106 2775 * * 4767 5188 2535 * 4338 2855 3387 4616 5002 4117 5269 * * * 36 0 * * * * * * 4339 0 0 W 37 * * 892 * * 2535 * * * * * 2382 * * * * * * 3368 * 37 0 * * * * * * 4339 0 0 P 38 * * * * * 4231 * * 5129 * * * 218 * 4095 * * * * * 38 83 4162 * 1000 1000 * * 4339 1252 0 E 39 5002 * * 1524 4162 * * 4957 * * 4999 * * * 1085 * 5042 * * * 39 79 4231 * 0 * * * 4339 1098 0 D 40 3069 * 2048 4085 * * 5002 * 1504 3187 * * * * 5367 * 4006 * * * 40 0 * * * * * * 4339 0 0 C 41 * 136 * * * * * * * * * * * * * 4259 4733 * * * 41 0 * * * * * * 4339 0 0 K 42 * * * * 4999 * * * 3368 249 5042 * * * * * * * * * 42 0 * * * * * * 4339 0 0 P 43 3682 * * 3402 * 4767 * * 1665 * * 4148 3026 4064 2521 * * 4006 * * 43 0 * * * * * * 4339 0 0 E 44 * * * 460 * * * * 3900 * * * 5188 2955 * * * * * 4338 44 0 * * * * * * 4339 0 0 S 45 * * * * * 447 * * * * * 4338 * * * 2203 * * * * 45 0 * * * * * * 4339 0 0 E 46 4616 * * 2652 * * * 3158 1934 * * * * 3532 1825 * 4117 * * * 46 0 * * * * * * 4339 0 0 A 47 1595 * 3843 4999 * * * * 2103 5367 * 3030 * 5406 2837 * 5314 * * * 47 0 * * * * * * 4339 0 0 I 48 * 3997 * * * * * 4423 * 2845 4616 * * * * * * 493 * * 48 0 * * * * * * 4339 0 0 V 49 * * * * * * * * * * * 4386 * * 3997 3730 600 2694 * * 49 0 * * * * * * 4339 0 0 R 50 2778 * 4338 3976 * 3345 * * 3014 * * 4306 * 4112 1727 3203 * * * * 50 0 * * * * * * 4339 0 0 A 51 2652 250 * * * * * * * * * * * * * * * * * * 51 0 * * * * * * 4339 0 0 T 52 989 * * * * 4259 * * * 4616 * * * * * 3588 2964 2382 * * 52 0 * * * * * * 4339 0 0 N 53 5197 * * 4338 3997 * 4006 2614 * 1752 5320 3368 * 3493 5129 4957 * 3906 * * 53 0 * * * * * * 4339 0 0 K 54 * * 3345 2152 * 3945 * * 1766 * * 3738 * * * 2280 4767 * * * 54 0 * * * * * * 4339 0 0 L 55 * * * * 1310 4758 * * * 1956 * * * * * * 4006 2061 * * 55 0 * * * * * * 4339 0 0 F 56 3997 * * * 1330 * * 3522 * 1537 4117 * * * * * * * * 4314 56 0 * * * * * * 4339 0 0 Q 57 5129 5320 * * * * * * 1953 * * 5002 * 2632 1208 3997 * * * * 57 0 * * * * * * 4339 0 0 D 58 4259 * 1745 1776 * * * * 1874 * * * * 4036 * 5406 * * * * 58 0 * * * * * * 4339 0 0 I 59 * * * * 3997 * * 1521 * 1805 4338 * * * * * * 1980 * * 59 0 * * * * * * 4339 0 0 M 60 * * * 4006 * * 4933 * 1537 * 2648 2311 * * 3436 * 4338 4117 * * 60 0 * * * * * * 4339 0 0 Q 61 3411 * 5292 3618 * 5314 * * 1549 * * 3473 * 3656 4036 * 2310 * * * 61 0 * * * * * * 4339 0 0 K 62 4338 * 4733 * * * 2310 * 2931 * * 2537 * * 4933 2508 3098 4259 * 5042 62 136 3473 * 0 * * * 4339 1599 0 A 63 4423 147 * * * * * * * * * * * * * 4314 * * * * 63 0 * * * * * * 4339 0 0 P 64 2698 * * 4767 3673 3279 5697 * * 3157 * 3477 2609 3056 3469 4957 * * * * 64 0 * * * * * * 4339 0 0 E 65 4999 * 1929 1587 * * * * 2400 * * 4758 3997 5188 * 5292 5002 * * * 65 0 * * * * * * 4339 0 0 E 66 4868 * 5269 599 * * * * 3997 * * 4259 3732 5197 * * 4006 * * * 66 0 * * * * * * 4339 0 0 F 67 * * * * 645 * * 4338 * 2947 3900 * * * * * * 4259 * 4006 67 0 * * * * * * 4339 0 0 K 68 * * 2800 3812 * * * * 2736 * * 3018 * 4148 3358 3001 2447 4338 * * 68 0 * * * * * * 4339 0 0 D 69 1717 * 3163 2920 * * * 5314 4197 3549 * 3878 * 4496 4259 4868 3504 * * * 69 0 * * * * * * 4339 0 0 Y 70 * * * * 3631 * 1873 * * 3997 * * * * * 4117 * * * 927 70 0 * * * * * * 4339 0 0 A 71 1651 * * * 4767 4338 * * 4006 * * * * * * 5314 4868 2397 2117 4231 71 0 * * * * * * 4339 0 0 K 72 * * 3694 2443 * 4933 * * 1797 * 5292 4010 * 3137 5188 * 2659 * * 4999 72 0 * * * * * * 4339 0 0 C 73 4006 93 * * * * * * * * * * * * * * * * * * 73 0 * * * * * * 4339 0 0 L 74 * * * * * * * 1990 * 634 3900 * * * * * * 4758 * * 74 54 4758 * 1585 585 * * 4339 1000 0 D 75 * * 1189 1874 * * 4767 * 4006 * * * * * 3997 3855 * * * 4113 75 0 * * * * * * 4339 0 0 W 76 4758 * 5129 4117 4068 * 3678 * 1797 * * 4298 * 3564 4338 * * * 3368 2560 76 73 4338 * 0 * * * 4339 1000 0 Y 77 * * * * * * 4338 * * * * 1627 * * 2684 2255 4031 * * 2318 77 0 * * * * * * 4339 0 0 G 78 * * * 3997 * 2360 * * 4338 * * 1768 * * * 1987 3557 * 4006 * 78 247 2669 * 1041 960 * * 4339 2009 0 L 79 * * * * * * 2708 * * 2954 2428 2907 * 2636 4338 3487 * * * 3331 79 0 * * * * * * 4339 0 0 K 80 5697 * 3510 2750 * * 3438 * 3339 * 4999 3276 * 4243 2555 3169 * * * 3566 80 35 5367 * 0 * * * 4339 1000 0 F 81 * * 4758 * 1011 * * 4006 * 2570 * 5188 * * * * 4117 * * 2726 81 77 4259 * 1000 1000 * * 4339 1000 0 S 82 * * 3418 2654 * 4733 * 4117 3399 * * * * 3875 3318 2359 3491 4338 4162 * 82 84 4138 * 1000 1000 * * 4339 1375 0 K 83 5002 * 3997 3482 * * 3212 * 3010 3257 * 4957 2589 4208 2976 * * * * 3316 83 0 * * * * * * 4339 0 0 C 84 * 93 * * * * * * * * * * * * * * 4006 * * * 84 0 * * * * * * 4339 0 0 R 85 * * * 4117 * * * * 5320 * * * * * 226 * * * * 3997 85 0 * * * * * * 4339 0 0 E 86 3988 * 3321 2662 * * * * 960 * * * 3470 * 4605 4895 * * * * 86 0 * * * * * * 4303 0 0 K 87 3794 * * 1836 * * * * 3360 * * * 4921 2339 * 3530 2101 * * * 87 0 * * * * * * 4303 0 0 Q 88 * * * 2662 * * * * * * * 4088 * 551 3316 * * * * * 88 0 * * * * * * 4303 0 0 A 89 1811 * * 3311 * 3254 * * 2953 * 5029 * * * 3127 3351 4308 4333 * 4750 89 0 * * * * * * 4303 0 0 A 90 1089 * * 3928 * * * 3987 3739 4840 * * 4750 * 4258 5247 * 2511 * * 90 0 * * * * * * 4303 0 0 F 91 * * * * 717 * * * * 1735 * * * * * * * * * 3453 91 0 * * * * * * 4303 0 0 E 92 * * 1148 1517 * * 5121 * * * * 3297 * * * 3856 * * * * 92 0 * * * * * * 4260 0 0 A 93 3262 * * 1864 * * * * 1519 * * * * * 4037 2663 4227 * * * 93 0 * * * * * * 4100 0 0 A 94 1725 2193 * * * * * * 2556 * * * * * * 2620 * 2775 * * 94 0 * * * * * * 2557 0 0 F 95 * 1063 * * 940 * * * * * * * * * * * * * * * 95 0 * * * * * * 2557 0 0 P 96 * * * * * * * * * * * * 368 * * 2150 * * * * 96 0 * * * * * * 2174 0 0 L 97 * * * * * * * 2073 * 391 * * * * * * * * * * 97 0 * * * * * * 2006 0 0 S 98 * * * * * 1000 * * * * * * * * * 1000 * * * * 98 0 * * * * * * 1587 0 0 E 99 * * * 1000 * * * * 1000 * * * * * * * * * * * 99 0 * * 0 * * * 1587 0 0 //