HHsearch 1.5 NAME c7ardK_ FAM FILE c7ardK_ COM /bmm/www/servers/phyre2/HH/hhmake -i c7ardK_.a3m DATE Sat Dec 11 09:40:33 2021 LENG 104 match states, 104 columns in multiple alignment FILT 100 out of 172 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.4 EVD 0.4322 -1.4559 SEQ >ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCCCSS CCCC >sa_dssp EDEEEEECDDCEEDBEDDDDEBDECBDEEEDDCDCCCECDCDBDEBDBDDDDDDBEEEEEEDBEEDBEDBEEDBDDDCEECDEEBEDDDEEDDEEDEEBC CECE >ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH HHCC >ss_conf 9789888999999999999999999999748999999999999999999999999951775119999999999999999999999999983166248873 3009 >Consensus xxxxxxxxtxylxxxxxlFxiGlxgxxlxRkxllxxLlxlExmlxxvxlxlvxxxxxxxxxxgxxxxlxiltxaacEaaiGLallVxxxRxxgsxxvxxl nxLK >c7ardK_ HNDAEFLGAVYNFSIRSVFITGILGAVYWRRNLITMLLCSEIAFIACSVNFLYASAYLNDMAGMLFSITITTISACETALGLALCVGYFQSRAANEVEAL NLLK >UniRef50_C4XMN4(6-99:103) NADH-quinone oxidoreductase subunit K n=1 Tax=Desulfovibrio magneticus RS-1 RepID=NUOK_DESMR E=9e-06 s/c=0.54 id=24% cov=83% -----------------LFAVGGV-MAAARRSILLILIGVEFMLAAAGLAFAGAGLAWNNLDGQAAVIIIMGLASAEAGLGLALLVHGRRGGGTDRADSY DRL- >UniRef50_A6G551(5-86:113) Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G551_9DELT E=9e-05 s/c=0.59 id=24% cov=80% --------THYLYFGIALFALGLGGAAL-RRSLIAVLLSVQLMFMAAAVLLCAYVPVHGAAQGRVAALLIVLVGFVEVTIAAAVVVRAIRS--------- ---- >UniRef50_Q0AAP1(6-97:103) NADH-ubiquinone oxidoreductase, chain 4L n=4 Tax=Gammaproteobacteria RepID=Q0AAP1_ALHEH E=1e-08 s/c=0.67 id=19% cov=86% ----------YVLTAAGLFAIGVYGL-LVQTHLLRRILAVNVIGNAVFLLLVAWAVRDGrppDPVPHAMVLTGIVIAVSATAFALALLRRYYRDTGRVSL ED----- >UniRef50_Q057W6(10-97:100) NADH-quinone oxidoreductase subunit K n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=NUOK_BUCCC E=9e-07 s/c=0.62 id=23% cov=80% -----------------LFFIGIISLLIH-KNLIFILVSLEVLINSIILGFILIGKYWKQIDCCVLYIFIVTIATVEVSVMLAIFLRIYQRYHTLDIYKL ---- >UniRef50_P25000(2-97:98) NADH-ubiquinone oxidoreductase chain 4L n=35 Tax=Deuterostomia RepID=NU4LM_PISOC E=2e-07 s/c=0.59 id=28% cov=93% --------SSYLTIIISFFYLGILGILLNRLHLLSILLCFELLLISLFIWICNTLFKTFNNLILSNNLILLTLSACEASAGLSLMVALSRTHNSDLVSSM NILQ >UniRef50_B9L175(1-101:102) NADH-quinone oxidoreductase subunit K n=2 Tax=Thermomicrobia (class) RepID=NUOK_THERP E=7e-11 s/c=0.68 id=23% cov=97% ---SELSATHFLLLSAALFIIGMVG-VLTRRNVLVIFMCIELMLNAVNVSLIGFAWELHQLTGQVFALFVIAIAAAEAVVGLGIVMALTRRTDTVDIDEL RQLR >UniRef50_Q5F0F6(4-99:100) NADH-ubiquinone oxidoreductase chain 4L n=22 Tax=Eumalacostraca RepID=Q5F0F6_9EUCA E=2e-10 s/c=0.70 id=25% cov=93% ------FSMVWVASSLVMIFCGLWGFISYHKHLLNSLLSLEFMMLGVFWLLSL--QMAGVGSEIYFSLFFLTLAACEGALGLSLLVLMVRSHGNDRFMSF NLLE >UniRef50_Q9B6D4(1-85:89) NADH-ubiquinone oxidoreductase chain 4L n=6 Tax=Dikarya RepID=NU4LM_YARLI E=4e-07 s/c=0.66 id=30% cov=83% -----------MFIGTIILVLSFLGFVFNRRNIILAFICLETMLLGINLILLRNSVLFDDISGSLFAIVIIILAGVESAIGLSLLVSYYRLRGVIN---- ---- >UniRef50_B3TJZ0(6-95:96) NADH-ubiquinone oxidoreductase chain 4L n=1 Tax=Eclysippe vanelli RepID=B3TJZ0_9ANNE E=7e-05 s/c=0.54 id=27% cov=87% --------------FTIMFLMTIFTVVYQRQHLLMVLLGLEGVML-MMILILLNQVSNPAYTDSFLFIIILSFGAIEASLGLALLVSIARKSGSDLVSNL TLSK # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * H 1 * * * * * * 0 * * * * * * * * * * * * * 1 0 * * * * * * 1000 0 0 N 2 * * * * * * * * * * * 0 * * * * * * * * 2 0 * * * * * * 1559 0 0 D 3 * * 1000 * * * * * * * 1000 * * * * * * * * * 3 0 * * * * * * 1559 0 0 A 4 1519 * * * * * * * * * * 1681 * * * 1560 * * * * 4 0 * * * * * * 2004 0 0 E 5 * * 1883 456 * * * * * * * * * * * * * * * * 5 0 * * * * * * 2473 0 0 F 6 * * * * 1504 * * * * 2599 1572 * * * * * * * * 2777 6 0 * * * * * * 3018 0 0 L 7 * * * * 1811 * * 2968 * 1190 * * * * * 2749 * * * * 7 0 * * * * * * 3173 0 0 G 8 1738 * * * * 1221 * * * * * * * * * 2898 * 2866 * * 8 0 * * * * * * 3173 0 0 A 9 2405 * * 4289 * * * * * 4940 4358 * * * * 2375 1041 * * * 9 48 4940 * 0 * * * 4719 1000 0 V 10 3526 * * * 4769 * 2308 3645 * 2874 * * 4475 * * 2900 3051 3000 * 4892 10 0 * * * * * * 4852 0 0 Y 11 * * * * 2159 * * 3145 * 3804 * * 4808 * * * * 4984 4961 1023 11 0 * * * * * * 5055 0 0 N 12 5236 * * * * * 4015 5950 5687 1125 3144 2761 * * * 5375 4306 4091 * 5410 12 0 * * * * * * 5266 0 0 F 13 5684 5601 * * 1241 * * 3224 * 2562 5643 * * * * * 5327 3465 * 2998 13 0 * * * * * * 5318 0 0 S 14 * * * * 4320 * * 3218 * 2446 4564 5658 * * * 3148 2571 1772 * 5449 14 0 * * * * * * 5420 0 0 I 15 2406 6312 * * 2693 3471 * 3522 * 2729 * * * * * 2088 * 3627 * * 15 0 * * * * * * 5431 0 0 R 16 2571 4380 * * 3222 4289 * 3480 * 3575 4221 * 4723 * 5331 2986 3183 4454 * 4222 16 0 * * * * * * 5459 0 0 S 17 2433 3785 * * 3706 4557 * 3252 * 2886 3976 * * * * 3433 3178 3104 * * 17 0 * * * * * * 5557 0 0 V 18 4447 * * * 5299 6062 * 2932 * 1237 2419 * * * * 4572 4155 3770 * * 18 0 * * * * * * 5646 0 0 F 19 * * * * 359 6120 * 4149 * 4339 6249 * * * * * * 4750 * 4320 19 15 6569 * 0 * * * 5710 1000 0 I 20 2825 4161 * * 2728 4111 * 3054 * 3152 3779 * * * * 3429 4324 3172 5652 6072 20 0 * * * * * * 5717 0 0 T 21 6319 5548 * * 4108 4368 * 1408 * 2286 3395 * * * * 4102 5538 3279 * * 21 16 * 6506 * * * * 5723 0 0 G 22 4158 5291 * * * 359 * * * * 6579 6340 * * * 3574 4961 * * * 22 11 * 7053 * * 0 * 5767 0 1000 I 23 4028 * * * 5650 5514 * 2559 * 1080 4153 * * * * 6343 4697 3004 5488 * 23 0 * * * * 0 * 5770 0 1000 L 24 4370 6786 * * 3470 4868 * 2584 * 2057 4066 * * * * 4471 4006 4372 5240 2564 24 71 * 4390 * * * * 5769 0 0 G 25 4498 4485 * * * 620 * 6372 * * 5624 6139 * * * 3200 4148 4363 * * 25 210 * 2884 * * 0 * 5742 0 2336 A 26 4355 * * * 2276 * * 2855 * 1575 5336 * * * * 5321 5556 2509 * 5386 26 133 * 3501 * * 0 * 5704 0 3129 V 27 2553 4692 * * 4159 5394 * 3474 * 3342 3615 * * * * 3229 4844 1740 * * 27 0 * * * * 0 * 5717 0 2914 Y 28 4603 * * * 2990 * * 2780 * 1460 3878 * * * * 3459 3615 4339 * 4885 28 96 * 3953 * * * * 5768 0 0 W 29 4766 * * * * * 4098 * 3850 * 6351 2061 * 2672 4732 2759 3982 3600 4830 4049 29 19 * 6252 * * 0 * 5723 0 2576 R 30 * * * * 6092 * 5800 6552 5280 * * 5586 * 3265 444 * 7089 * 5747 4470 30 110 * 3762 * * 0 * 5756 0 1000 R 31 5424 * * * * 7059 * 6708 1651 4658 5532 4231 6344 4158 1606 5003 3719 6582 * 6327 31 13 * 6831 * * 0 * 5720 0 2649 N 32 6828 * 7157 * * 5567 1266 * * 6791 * 1327 5647 5237 * 4094 * 6018 * 5696 32 14 * 6672 * * 0 * 5772 0 1000 L 33 3518 * * * 4659 * * 1954 * 1090 3690 * * * * * * 3881 * * 33 0 * * * * 0 * 5764 0 1000 I 34 5506 * * * 4304 * * 1921 * 941 4414 * * * * * * 3389 * * 34 13 * 6835 * * * * 5769 0 0 T 35 4566 6518 * * 3607 4954 * 3870 6667 2875 2836 3984 * * 3884 2543 3665 3637 * 5952 35 0 * * * * 0 * 5769 0 1000 M 36 3103 * * * * 4895 * 2201 * 4674 2257 * * 6472 5584 4259 4543 1961 * * 36 0 * * * * * * 5769 0 0 L 37 * * * * 3349 * * 4583 * 392 4142 * 5506 * * * * 6830 * 6535 37 0 * * * * * * 5769 0 0 L 38 6895 * * * 5251 * * 2732 * 1106 1830 * * * * * * 3859 * * 38 0 * * * * * * 5769 0 0 C 39 3272 1830 * * 7110 2667 * 5987 * * * * * * 5506 1363 5388 * * * 39 0 * * * * * * 5769 0 0 S 40 6343 * * * 5147 * * 2282 * 1153 4243 * 5506 * * 4792 5509 2547 * * 40 0 * * * * * * 5769 0 0 E 41 * * * 61 * * * * * * * 5584 * 5600 * * * * * * 41 0 * * * * * * 5769 0 0 I 42 3681 * * * 3404 3628 * 2956 * 1700 3746 * 5506 * * 5077 5657 3005 * 4661 42 0 * * * * * * 5769 0 0 A 43 4167 * * * 5471 * * 2849 * 3232 860 5987 * * * 6466 5795 3639 * * 43 30 * 5596 * * * * 5769 0 0 F 44 4530 * * * 4166 5577 * 3449 * 1104 2523 * 5503 * * 6366 4798 3660 * * 44 15 * 6593 * * * 0 5757 0 1565 I 45 5307 * * * 6514 5105 6826 4218 * 1411 4895 1507 * 6311 * 5216 * 4014 * 6759 45 15 * 6593 * * 591 1572 5751 0 1963 A 46 1577 6356 * * * 2032 * 5205 * * 4461 * * * * 1858 4721 5519 * * 46 0 * * * * 968 1033 5758 0 1608 C 47 2606 5600 * * 5807 * * 2952 * 2289 4949 * 6470 * * 5235 5038 1463 * * 47 17 * 6404 * * 0 * 5764 0 1000 S 48 3421 * 6365 * 2249 4807 * 3821 * 4497 4231 1839 * * * 3954 6440 5577 * 3271 48 27 * 5775 * * 0 * 5754 0 1000 V 49 * 5245 5637 * 3309 5466 * 2492 * 1163 4849 * * * * * 5418 2853 6759 * 49 0 * * * * * 0 5763 0 1639 N 50 3064 * * * 4198 3193 * 5207 * 2345 3659 2432 * * 6542 3094 4223 4923 6177 * 50 15 * 6595 * * 0 * 5763 0 1639 F 51 5014 * * * 1644 * * 2598 * 1345 3665 * * * * * 6433 * * * 51 10 * 7126 * * * 0 5763 0 1000 L 52 3289 4333 * * 4675 * * 2744 * 3177 3932 * 6246 * * 3877 4130 1535 * * 52 0 * * * * 1000 1000 5768 0 1656 Y 53 1986 6793 * 5994 4806 3230 * 4102 * 2380 4213 6192 * * 6845 4496 3048 4401 * 4601 53 101 * 3886 * * 0 * 5774 0 1000 A 54 3007 4655 * * 1345 5045 * 3872 * 4626 * 4756 5876 * * 3521 4801 6665 3952 4276 54 37 * 5315 * * * 0 5702 0 2857 S 55 2755 5357 5420 * 6283 2389 * 6189 6235 3226 * 4847 4048 6510 * 2000 5662 4507 4419 * 55 0 * * * * 705 1372 5691 0 3065 A 56 3933 6595 5675 6803 4781 6703 5667 5766 4267 2920 4894 3956 5578 4227 3126 2926 4499 3063 5477 5456 56 18 * 6341 * * 1576 589 5730 0 1952 Y 57 4834 5496 * 4625 2988 * 3488 4341 6071 3454 3573 5410 * 6400 3794 4250 3943 4408 * 2511 57 22 6053 * 2252 340 625 1508 5724 1433 2018 L 58 4635 6025 4731 * 3317 5687 3476 * 6546 2006 4064 4641 * 5681 6428 4549 3157 4535 3544 5453 58 62 4993 6557 1440 663 0 * 5757 2052 1000 N 59 5150 * 3061 4751 3903 2166 4619 * 5608 4935 5369 2437 5219 4378 6990 5358 4155 4830 7109 5903 59 206 3598 4309 1478 641 0 * 5765 2793 1000 D 60 4455 6580 2273 7344 6230 4307 6651 4574 * 6423 * 2505 3468 3034 6062 3167 3871 5633 * * 60 55 5162 6728 522 1721 * 0 5725 1696 2377 M 61 3928 * * 4687 5525 4132 5862 3187 * 2416 3612 4475 3297 6747 * 3512 4899 3988 5364 4159 61 0 * * * * 962 1039 5726 0 2392 A 62 4411 * 3085 3950 4891 3257 6688 5473 7017 3046 7238 4230 5458 5257 5677 3018 2985 3786 6580 6623 62 74 6299 4744 1000 1000 1601 577 5769 1000 1834 G 63 4659 5249 4794 3347 5207 918 * 5193 * 5007 * 4749 4639 6312 * 4323 4843 6617 * * 63 0 * * * * 2428 297 5708 0 2569 M 64 4311 4530 6994 4042 6332 5525 5566 4950 * 3920 3501 5277 * 1520 5577 3292 4845 4512 * 5668 64 19 * 6266 * * 404 2032 5714 0 2442 L 65 3488 5347 * 6580 3858 5790 6533 2652 * 3237 3735 * 4585 * * 3955 6680 2325 6694 3151 65 25 5855 * 2222 348 948 1054 5754 1604 1533 F 66 3969 * * * 1641 * * 3885 * 2275 2770 6184 * * * 5182 3866 4148 7233 5533 66 0 * * * * 0 * 5758 0 1000 S 67 2019 6622 * * 4093 4874 * 5377 * 3723 6396 6194 3114 * * 2548 3628 2840 * 5797 67 0 * * * * * * 5769 0 0 I 68 * * * * 3205 6100 * 1934 * 1067 4131 * * * * * * 4038 * 5651 68 10 * 7198 * * * * 5769 0 0 T 69 * * * * 1596 * * 2060 * 3236 4766 * 4937 * * * 4495 2858 6816 3997 69 0 * * * * * 0 5773 0 1000 I 70 5014 * * * 3046 5578 * 1934 * 2627 4276 * * * * 4877 5597 1976 * 4535 70 0 * * * * 0 * 5773 0 1000 T 71 * * * * 5588 * * 2065 * 907 3136 * * * * * 4895 4354 * 6529 71 0 * * * * * * 5769 0 0 T 72 2133 5651 * * 6396 4259 * 5362 * 5600 * * 5651 * * 3944 1153 3203 * * 72 0 * * * * * * 5769 0 0 I 73 4026 * * * 2338 * * 2527 * 2010 4094 * * * * * * 1997 * 6640 73 0 * * * * * * 5769 0 0 S 74 922 6533 * * * 2951 * * * * 5171 6706 * * * 2418 4217 4211 * * 74 0 * * * * * * 5769 0 0 A 75 687 * * * 5600 4094 * * * * * * * * * 4037 4716 2318 * * 75 0 * * * * * * 5769 0 0 C 76 1563 1130 * * * 6241 * 5827 * 6312 * * 5651 * * 4069 5957 3931 * * 76 0 * * * * * * 5769 0 0 E 77 5064 * * 119 * 4785 * * * * * * * * * 6241 * * * * 77 0 * * * * * * 5769 0 0 T 78 1200 * * * * 2813 * 5742 * 5996 4568 * * * * 3079 4076 2571 * * 78 0 * * * * * * 5769 0 0 A 79 823 6613 * * * 3887 * * * * * * * * * 1857 5600 4049 * * 79 0 * * * * * * 5769 0 0 L 80 5110 * * * 4931 * * 2007 * 1721 5229 * * * * * 4009 1751 * * 80 0 * * * * * * 5769 0 0 G 81 2715 * * * 6535 340 * * * * 6459 * * * * 5641 * 5996 * * 81 0 * * * * * * 5769 0 0 L 82 5600 * * * 5171 * * 5406 * 222 5433 * * * * 5506 * 5297 * * 82 0 * * * * * * 5769 0 0 A 83 1102 * * * * 3037 * * * * 5996 * 6442 * * 1571 4749 6465 * * 83 0 * * * * * * 5769 0 0 L 84 * 6452 * * * * * 1525 * 950 5209 * * * * * * 3376 * * 84 0 * * * * * * 5769 0 0 C 85 4694 5611 * * 5465 6312 * 2358 * 1279 3604 5651 * * * * * 2348 * * 85 0 * * * * * * 5769 0 0 V 86 5526 * * * 7018 * * 2893 * 3056 4720 * 5506 * 5584 5183 4538 825 * * 86 0 * * * * * * 5769 0 0 G 87 1870 6725 5647 * 6383 4881 6414 3831 6652 2791 5423 4516 * 5563 3603 2647 4743 5142 * 5728 87 0 * * * * * * 5766 0 0 Y 88 4377 6095 * * 3494 6414 4912 2577 * 1840 3402 * * * 6290 5348 3482 4667 7079 3501 88 0 * * * * * * 5766 0 0 F 89 3938 * * * 2550 * 4064 3165 5959 * * * * * 5439 4272 3553 2931 * 1809 89 0 * * * * * * 5766 0 0 Q 90 * * * * * * 6800 * 3808 * * 5182 * 3846 347 5955 5647 * * * 90 0 * * * * * * 5766 0 0 S 91 4130 * 5578 6027 4964 3851 4482 5215 3767 3799 6697 3752 * 5344 3344 2007 3135 5735 * * 91 0 * * * * * * 5766 0 0 R 92 4313 6435 * 6625 4047 6372 2079 * 3252 4616 6992 5952 * 7213 2539 4919 3557 5429 * 2956 92 10 7186 * 1585 585 * * 5721 1000 0 A 93 4183 * 7131 6540 * 833 5239 * 3852 * * 4041 * 4220 3261 4284 * * * * 93 0 * * * * * * 5721 0 0 A 94 4787 * 5037 * * 5518 6782 5948 4961 * * 1883 * * 5433 1789 2062 5442 * 6957 94 0 * * * * * * 5721 0 0 N 95 5448 * 1221 5626 6799 * 7186 2614 * 2991 * 5391 * * * 5993 4595 2817 * * 95 0 * * * * * * 5721 0 0 E 96 5029 * 2161 4442 4527 * 5297 * 5216 2627 5164 3157 * 4130 3860 3969 7184 * * 3243 96 0 * * * * * * 5693 0 0 V 97 4741 5299 * * 3774 * * 2372 * 2410 3976 * 5717 * * 5653 3470 1785 * * 97 0 * * * * * * 5694 0 0 E 98 4869 * 1892 3201 5039 6301 5834 * 3002 6793 5508 4499 * 5151 5249 2435 4494 * * 4532 98 0 * * * * * * 5682 0 0 A 99 3506 * 3417 3690 6112 5161 5916 * 4489 4725 6457 3006 * 3394 5525 2100 3605 5510 * 6709 99 0 * * * * * * 5674 0 0 L 100 3870 * * * 3163 * 6263 3026 * 1218 3585 * * * * 4101 * 4827 5321 4251 100 0 * * * * * * 5576 0 0 N 101 * 6262 3924 * 6016 6098 6787 * 4652 * * 1197 6608 4300 4050 2638 3012 * * * 101 0 * * * * * * 5554 0 0 L 102 6668 5918 5363 2639 5439 6048 * 4845 4785 1362 3690 5130 * 4422 6082 4725 4603 4864 6683 * 102 0 * * * * * * 5537 0 0 L 103 * * * * 5946 * 5417 5110 * 464 2789 6220 * * * 6259 5947 * * 5713 103 0 * * * * * * 5534 0 0 K 104 * * * 4580 * * * * 553 * * * * 3275 2530 * * * * * 104 0 * * 0 * * * 5403 0 0 //