HHsearch 1.5 NAME c7a23Y_ FAM FILE c7a23Y_ COM /bmm/www/servers/phyre2/HH/hhmake -i c7a23Y_.a3m DATE Sat Oct 31 08:45:48 2020 LENG 98 match states, 98 columns in multiple alignment FILT 27 out of 31 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.0 EVD 0.4241 -0.6969 SEQ >ss_dssp CTTTCCCHHHHHHSHHHHHHSSHHHHHHHHHHHHHCCCSGGGHHHHHHHHHHHHHHHHHHTTTTTTHHHHHHHHHHHTTTCSGGGHHHHHHHHHHSCC >sa_dssp DDECDDDEBADCBADDABDEDBEECDDDCEEBDEECEDEEEAEDDCEDCEECBDDBADDBCEECDECADEAADBAEEDECECEDBDEDBDDBCEDDBE >ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC >ss_conf 99887632899999999999840542999998505899899999859999999999999995434999999999997043016307989997641589 >Consensus xxxxvxtSaxLxAaaxhlgxxCxxxnxeFMlCkxexxdPrxCLxEGxxVTxCaxxxxrxixxxCxxefxxyxxCLdxxxxxfxxCRkxQxafdkxxxx >c7a23Y_ TGNPIPTSAVLTASAKHIGMRCMPENVAFLKCKKNDPNPEKCLDKGRDVTRCVLGLLKDLHQKCQKEMDDYVGCMYYYTNEFDLCRKEQEAFEKVCPL >UniRef50_D2VD48(9-98:118) NADH-ubiquinone oxidoreductase n=1 Tax=Naegleria gruberi RepID=D2VD48_NAEGR E=3e-06 s/c=0.59 id=31% cov=92% ----IDSSAVIAALAPALLTKCSTENTEYMKCKSKSENPEDCLKESINCRKCVFSLASEfMNSPCQPKFSTLVECLRKREYDYKDCYPQRSAFE----- >UniRef50_UPI000186E5B1(16-111:171) NADH-Ubiquinone oxidoreductase 19KDa subunit n=1 Tax=Pediculus humanus corporis RepID=UPI000186E5B1 E=5e-27 s/c=1.26 id=33% cov=96% TANDVNISSVyLKAGAIHYAKYCEKENDEFMLCKRELKDPRKCLKEGKKVTNCAMKFFCEVKKHCLDEFNQYADCLYKSSatMSYRYCKKTQGIFD---- - >UniRef50_B9WL68(35-123:183) NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit, putative (Nadh-ubiquinone oxidoreductase subunit, putative) n=1 Tax=Candida dubliniensis CD36 RepID=B9WL68_CANDC E=2e-25 s/c=1.30 id=34% cov=91% ------TSAPLLSASYYIGDKCKPFNDDFLLCKQEHNgGTLECMKEGRRVTRCAISVLKDINKYCFDEFKLHYECLEQNNQYFNRCRSSEGILSK---- >UniRef50_Q6V504(8-101:106) Putative NADH:ubiquinone oxidoreductase 12.5 kDa subunit n=1 Tax=Chlamydomonas reinhardtii RepID=Q6V504_CHLRE E=7e-24 s/c=1.18 id=32% cov=97% ----VPYSHELYAMSRHVVFRAEKEHKAAVECKGKHDWPEDCKPESEALVRATNKLYKEIMEKSPEEFKEYAQCLDWYGLRFSRCRDKQTAFEKAFPI >UniRef50_D0NBZ9(11-101:116) Putative uncharacterized protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0NBZ9_PHYIN E=7e-21 s/c=1.11 id=32% cov=94% ---PDTDNTSLTCAARILAHECADANLEFMRCKQRDANPRTCLVQGEKVTAAVLKTLREVETNCGETYSAYKKALKKNWHRIDETRKEQAALEE---- >UniRef50_A8Q7M8(23-111:182) NADH-ubiquinone oxidoreductase 19 kDa subunit, putative n=3 Tax=Chromadorea RepID=A8Q7M8_BRUMA E=2e-12 s/c=0.82 id=25% cov=74% ---------------------CEREVKDFMLRRQETEDPRLSLREGQALTACGIKFLQALKKVCNENVDRYADCIDHRTskLYITPCREQQRRLD----- >UniRef50_Q54P46(5-95:104) NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 n=1 Tax=Dictyostelium discoideum RepID=NDUA8_DICDI E=5e-08 s/c=0.65 id=26% cov=93% ------TRAELVAQRDGVWAVCGEVFEAYEKCRMEkGSDPELCLRESTAVVGCSQKVMREIVKNCQKELNESVKCIEENNMRTIPCEEENKAFNECF-- >UniRef50_B3RMC1(10-98:106) Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax adhaerens RepID=B3RMC1_TRIAD E=8e-27 s/c=1.36 id=34% cov=91% ------TSAVLAAAAYHYGNYCDKPNHEFMLCRYETTDPRKCLPQGRRVSECAVEFFKKVNASCREDFTKHWTCLDHNNHEFEYCRPSQRAYDE---- >UniRef50_UPI000180B56E(49-137:192) PREDICTED: similar to NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8 n=1 Tax=Ciona intestinalis RepID=UPI000180B56E E=2e-22 s/c=1.19 id=28% cov=90% -------SHVLKASAFQYANECNEVNKEFMLCREEEMDPRKCLKYNIKVSDCAENFFRKMTTACADEIVAFGKCLERDHKRsFVYCRDEQVKFDR---- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * T 1 * * * * * * * * * * * * * * * * 0 * * * 1 0 * * * * * * 1587 0 0 G 2 1000 * * * * 1000 * * * * * * * * * * * * * * 2 0 * * * * * * 1587 0 0 N 3 * * * * * * * * * * * 0 * * * * * * * * 3 0 * * * * * * 1587 0 0 P 4 * * 1834 * * * * * * * * * 475 * * * * * * * 4 0 * * * * * * 2208 0 0 I 5 * * 2602 * * * * 1362 * * * * * * * * * 1164 * * 5 0 * * * * * * 3063 0 0 P 6 * * 2604 * * * * * * * * 2740 1300 * * * 1839 * * * 6 0 * * * * * * 3063 0 0 T 7 4163 * 3637 * * * * 4643 * * * * * * * 1733 1192 * * 3555 7 0 * * * * * * 3984 0 0 S 8 * * * * * * * * * * * 3715 * * 3816 372 3644 * * * 8 0 * * * * * * 4065 0 0 A 9 638 * * * * * 2940 * * * * * 3826 * * 3604 3747 * * * 9 0 * * * * * * 4094 0 0 V 10 4067 * * 2810 * 4949 * * * * 4340 * 2057 * * 3796 4764 1447 * * 10 45 5010 * 0 * * * 4146 1000 0 L 11 * * * * * * * 3263 * 159 * * * * * * * * * * 11 0 * * * * * * 4220 0 0 T 12 3409 * * * 4386 * 4715 * 2641 2895 3225 * * * 3213 * 2940 3963 * 3107 12 0 * * * * * * 4220 0 0 A 13 500 3915 * * * * * * * * * * * * * 2141 * * * * 13 0 * * * * * * 4220 0 0 S 14 1185 * * * * 2436 * * * 3919 3783 * * 3963 * 3003 * 4386 * * 14 0 * * * * * * 4220 0 0 A 15 718 * * * * * 4386 * * * * * * * 3963 1836 * * * * 15 0 * * * * * * 4220 0 0 K 16 * * 3963 * 2378 * 3017 3916 3017 * * * 3919 * 2847 * * 4715 * 2419 16 0 * * * * * * 4220 0 0 H 17 3919 * * * 2390 3963 920 3915 * * * * * 4350 * * * * * 4831 17 0 * * * * * * 4220 0 0 I 18 * * * * 5052 * * 1777 * 1375 * * * * * * * 2870 * 2683 18 0 * * * * * * 4220 0 0 G 19 2466 * * * * 815 * * * 3919 * * * 4386 * * * 3783 3963 * 19 0 * * * * * * 4220 0 0 M 20 2675 * 3497 * 3783 * 3915 * 2017 * 4761 3054 * 4937 * 3947 3133 * * * 20 0 * * * * * * 4220 0 0 R 21 * * * 3116 4665 * 4937 * 2526 * * * * 3764 1826 * 5181 3963 * 2383 21 0 * * * * * * 4220 0 0 C 22 3821 106 * * * * * * * * * * * * * * * * * * 22 0 * * * * * * 4264 0 0 M 23 3209 * 2818 1969 * 3353 * * 2674 5255 4823 4368 * 4938 4941 3944 * * * * 23 0 * * * * * * 4264 0 0 P 24 3479 * 2694 2013 * * * * 2759 * * 4738 3391 4088 3917 * 3944 * 4733 * 24 0 * * * * * * 4264 0 0 E 25 3580 * 4706 1677 3345 * * * 4475 * * * 3724 4030 * * * 2364 * 3461 25 0 * * * * * * 4264 0 0 N 26 * * * * 3329 * 3821 * * * * 563 * * * 3919 4475 4575 * * 26 0 * * * * * * 4264 0 0 V 27 * * 2084 3425 * * 5235 * 1855 3985 * 3562 * * 4768 4475 3275 4823 * * 27 0 * * * * * * 4264 0 0 A 28 2006 * 2149 1037 * * * * * * * * * * * * 4706 * * * 28 0 * * * * * * 4264 0 0 F 29 3821 * * * 316 * * * * * * * * * * * * * * 2987 29 0 * * * * * * 4264 0 0 L 30 * * * 4031 * * * 4706 * 2724 560 * * * * * * 3821 * * 30 0 * * * * * * 4264 0 0 K 31 * * 4768 3821 * * * * 2102 1001 5255 * * 3819 3985 * * * * * 31 0 * * * * * * 4264 0 0 C 32 * 121 * * * * * * 4706 * * * * * 4575 * * * * * 32 0 * * * * * * 4264 0 0 K 33 * * * * * * 4738 * 870 * * * * 4938 1385 * * * * * 33 0 * * * * * * 4264 0 0 K 34 5243 * 5286 4368 * 3821 * * 2488 * 4031 4941 * 2031 4105 3944 * * 4347 2837 34 0 * * * * * * 4264 0 0 N 35 * * * 600 * 4475 * * 2644 * * 3795 * * 3985 * * * * * 35 91 4031 * 0 * * * 4264 1000 0 D 36 4938 * 2473 2655 * 4031 2935 * * 3579 * 3955 * * * 3452 2344 * * * 36 88 5243 4941 1000 1000 * * 4264 1000 0 P 37 3968 * 3395 3204 * * 4692 5031 2195 * 4312 3450 3219 4446 4052 4007 5192 * * * 37 105 3831 * 582 1591 0 * 4244 1349 1000 N 38 * * 876 * * 2441 * * * * * 2321 * * * * * * 3821 * 38 0 * * * * * * 4264 0 0 P 39 * * * 5243 * 5286 * * 4941 * * * 237 * 4941 * 4862 * * * 39 48 4941 * 1000 1000 * * 4264 1000 0 E 40 4969 * * 1558 4084 * * 4938 * 4862 4941 * * * 1089 * * * * * 40 37 5286 * 0 * * * 4264 1000 0 K 41 3025 * 2182 3901 * * 4969 * 1447 3277 * * * * 5330 * 3985 * * * 41 0 * * * * * * 4264 0 0 C 42 * 121 * * * * * * * * * * * * * 4575 4706 * * * 42 0 * * * * * * 4264 0 0 L 43 * * * * 4941 * * * 3821 214 4862 * * * * * * * * * 43 0 * * * * * * 4264 0 0 D 44 3624 * 4823 3985 * 4738 * * 1608 * * 4089 3361 3983 2537 * * 3985 * * 44 0 * * * * * * 4264 0 0 K 45 * * * 482 * * * * 3795 * * * 5125 2893 * * * * * 4368 45 0 * * * * * * 4264 0 0 G 46 * * * * * 406 * * * * * 4368 * * * 2344 * * * * 46 0 * * * * * * 4264 0 0 R 47 4475 * * 2901 * * * 3140 1891 * * * * 3668 1745 * 4031 * * * 47 0 * * * * * * 4264 0 0 D 48 1711 * 3778 4941 * * * * 2097 5330 * 2963 * 5365 2720 * 5255 * * * 48 0 * * * * * * 4264 0 0 V 49 * 3944 * * * * * * * 2735 4475 * * * * * * 435 * * 49 0 * * * * * * 4264 0 0 T 50 * * * * * * * * * * * 4347 * * 3944 3737 559 2922 * * 50 0 * * * * * * 4264 0 0 R 51 2861 * 4368 3946 * 3236 * * 2972 * * 4262 * 4036 1788 3148 * * * * 51 0 * * * * * * 4264 0 0 C 52 2901 207 * * * * * * * * * * * * * * * * * * 52 0 * * * * * * 4264 0 0 V 53 938 * * * * 4575 * * * 4475 * * * * * 3511 3275 2321 * * 53 0 * * * * * * 4264 0 0 L 54 5243 * * 4368 3944 * 3965 2618 * 1703 5290 3821 * 3425 4941 4938 * 3805 * * 54 0 * * * * * * 4264 0 0 G 55 * * 3291 2094 * 3880 * * 1929 * * 3737 * * * 2180 4738 * * * 55 0 * * * * * * 4264 0 0 L 56 * * * * 1315 4733 * * * 2061 * * * * * * 3985 1956 * * 56 0 * * * * * * 4264 0 0 L 57 3944 * * * 1474 * * 3460 * 1505 4031 * * * * * * * * 3821 57 0 * * * * * * 4264 0 0 K 58 4941 5290 * * * * * * 1790 * * 4969 * 3237 1153 3944 * * * * 58 0 * * * * * * 4264 0 0 D 59 4575 * 1892 1633 * * * * 1838 * * * * 4004 * 5365 * * * * 59 97 3944 * 0 * * * 4264 1000 0 L 60 * * * * * * * 1567 * 1796 3140 * * * * * * 1938 * * 60 42 5125 * 0 * * * 4264 1000 0 H 61 * * * 3985 * * 4823 * 1652 * 3821 1697 * * 3404 * 4368 4031 * * 61 0 * * * * * * 4264 0 0 Q 62 3352 * 5235 3284 * 5255 * * 1514 * * * * 4823 4004 3417 2285 * * * 62 0 * * * * * * 4264 0 0 K 63 3697 * 4706 * * * 2265 * 2808 * * 2499 3944 * * 3447 3012 4575 * 4862 63 0 * * * * * * 4264 0 0 C 64 * 106 * * * * * * * * * * * * * 3821 * * * * 64 0 * * * * * * 4264 0 0 Q 65 2674 * * 4738 3536 3209 5608 * * 3102 * 3639 3218 2631 3430 4938 * * * * 65 0 * * * * * * 4264 0 0 K 66 4941 * 1861 1715 * * * * 2337 * * 4733 3944 5125 * 5235 4969 * * * 66 0 * * * * * * 4264 0 0 E 67 4768 * 5235 594 * * * * 3944 * * 4575 3684 5243 * * 3985 * * * 67 0 * * * * * * 4264 0 0 M 68 * * * * 653 * * 4368 * 2850 3795 * * * * * * 4575 * 3985 68 0 * * * * * * 4264 0 0 D 69 * * 2859 3751 * * * * 2935 * * 2925 * 4089 3284 2964 2415 4368 * * 69 0 * * * * * * 4264 0 0 D 70 1853 * 3289 2673 * * * 5255 4081 3433 * 3836 * 4440 4575 4768 3450 * * * 70 0 * * * * * * 4264 0 0 Y 71 * * * * 3626 * 1806 * * 3944 * * * * * 4031 * * * 980 71 0 * * * * * * 4264 0 0 V 72 1778 * * * 4738 4368 * * 3985 * * * * * * 5255 4768 2329 2074 4059 72 0 * * * * * * 4264 0 0 G 73 * * 3889 2348 * 4823 * * 2013 * 5235 3971 * 2886 5125 * 2589 * * 4941 73 0 * * * * * * 4264 0 0 C 74 3985 94 * * * * * * * * * * * * * * * * * * 74 0 * * * * * * 4264 0 0 M 75 * * * * * * * 2004 * 641 3795 * * * * * * 4733 * * 75 55 4733 * 1585 585 * * 4264 1000 0 Y 76 * * 1264 1801 * * 4738 * 3985 * * * * * 3944 3832 * * * 4038 76 0 * * * * * * 4264 0 0 Y 77 4733 * 4941 4031 4029 * 3868 * 1755 * * 4303 * 3433 4368 * * * 3821 2473 77 0 * * * * * * 4264 0 0 Y 78 * * 4368 * * * * * * * * 1556 * * 2719 2205 4001 * * 2472 78 0 * * * * * * 4264 0 0 T 79 * * * 3944 * 2551 4368 * * * * 1692 * * * 1911 3694 * 3985 * 79 283 2487 * 1044 958 * * 4264 2214 0 N 80 * * * * * * 2695 * 4368 2783 2570 2800 * 2526 * 3971 * * * 3287 80 78 4245 * 1000 1000 * * 4264 1351 0 E 81 5608 * 3456 2685 * * 3421 * * * 4941 3598 * 4122 2038 3481 * * * 2901 81 110 3770 * 0 * * * 4264 1420 0 F 82 * * 4733 * 1026 * * 3250 * 3051 * 5125 * * * * 4031 * * 2683 82 0 * * * * * * 4264 0 0 D 83 * * 2666 2895 * 4706 * 4031 3357 * * 4862 * 3846 3274 3097 3654 4368 4084 * 83 48 4941 * 1000 1000 * * 4264 1000 0 L 84 4969 * 3944 3481 * * 3163 * 3601 3180 * 4938 2627 4081 2689 * * * * 3314 84 0 * * * * * * 4264 0 0 C 85 * 94 * * * * * * * * * * * * * * 3985 * * * 85 0 * * * * * * 4264 0 0 R 86 * * * 4031 * * * * 5290 * * * * * 237 * * * * 3944 86 0 * * * * * * 4264 0 0 K 87 3986 * 3069 3277 * * * * 968 * * * 3011 * 4475 4862 * * * * 87 0 * * * * * * 4264 0 0 E 88 3284 * * 1787 * * * * 3821 * * * 4969 2454 * 3530 2084 * * * 88 0 * * * * * * 4264 0 0 Q 89 * * * 2446 * * * * * * * 4031 * 615 3285 * * * * * 89 0 * * * * * * 4264 0 0 E 90 2036 * * 3199 * 3172 * * 2900 * * * * * 3215 3316 3811 4354 4786 4721 90 0 * * * * * * 4259 0 0 A 91 1113 * * 4734 * * * 3310 3177 4885 * * 4721 * 4557 5207 * 2761 * * 91 0 * * * * * * 4259 0 0 F 92 * * * * 731 * * * * 1716 * * * * * * * * * 3421 92 0 * * * * * * 4259 0 0 E 93 * * 1187 1613 * * * * * * * 2568 * * * 3937 * * * * 93 0 * * * * * * 4263 0 0 K 94 4161 * * 1670 * * * * 1151 * * * * 4350 3887 * 3993 * * * 94 0 * * * * * * 3932 0 0 V 95 2113 2083 * * * * * * 2404 * * * * * * 2488 * 2594 * * 95 0 * * * * * * 2507 0 0 C 96 * 908 * * 1098 * * * * * * * * * * * * * * * 96 0 * * * * * * 2507 0 0 P 97 * * * * * * * * * * * * 422 * * 1979 * * * * 97 0 * * * * * * 2120 0 0 L 98 * * * * * * * 1464 * 650 * * * * * * * * * * 98 0 * * 0 * * * 1948 0 0 //