HHsearch 1.5 NAME c6ydrA_ FAM FILE c6ydrA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c6ydrA_.a3m DATE Sat Apr 4 08:17:23 2020 LENG 129 match states, 129 columns in multiple alignment FILT 4 out of 8 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 1.7 EVD 0.4019 -1.0850 SEQ >ss_dssp CTTSCCHHHHHHHHHHHHTSCGGGCCHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHTTCCGGGHHHHHHHHHHHHTCSTTHHHHHHHHHSCHHHHHH HHHHHHHHHHHSCSCCCHHHHHHHHHHCC >sa_dssp EEEEECEEBBDDCBEEBCECDACECEEEDACDBBDCAACBADEBCEDBBDDAAEDABEDCECDEEDCEEBCDBACBACEBEECEDBDDBCEEDEDECBAD BACBAACACDEBDDDDDEEDDEDEEEEEE >ss_pred CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHH HHHHHHHHHHHCCCCCHHHHHHHHHHHHC >ss_conf 9511419999999999747441113488899999999999866518999999997532408982343579999864431358740478860533678999 99999999950876305789987876509 >Consensus xxdxlTLxxLxxxxxyxxxxdixxldexxlRAxLsLxxxxxRKxsrSxixxlxExHxxxExLxqDQxxxixqxYxxiHxDKGGxFEAALWqxWDrxSixl FixAxlxvxxxxPCESSxxVisxyxhfxx >c6ydrA_ NRDILTLENLGDILKYLNSADLTTLDEVSMRAALSLTCAGIRKTSRSMINTLTEQHVSAENLSPDQTQIIKQTYTGIHLDKGGNFEAALWKNWDRRSISL FLQAAISVLNTTPCESSKSVISAYNHFLQ >UniRef50_Q1PD56(146-272:281) Minor nucleoprotein VP30 n=15 Tax=Lake Victoria marburgvirus RepID=VP30_MABVA E=7e-48 s/c=1.50 id=67% cov=99% -KDVLTLENLGHILSYLHRSEIGKLDETSLRAALSLTCAGIRKTNRSLINTMTELHINHENLPQDQNGVIKQTYTGIHLDKGGQFEAALWQGWDKRSISL FVQAALYVMNNIPCESSISVQASYDHFI- >UniRef50_B8XCP2(142-260:289) VP30 n=2 Tax=Ebola-like viruses RepID=B8XCP2_9MONO E=2e-20 s/c=0.84 id=40% cov=92% ----VTLSMLIETAEYWSKQDIKNIDDSRLRALLTLCAVMTRKFSKSQLSLLCESHLRREGLGQDQSESVLEVYQRLHSDKGGNFEAALWQQWDRQSLIM FITAFLNIALQLPCESSSVVIS------- >UniRef50_Q77DJ5(142-260:288) Minor nucleoprotein VP30 n=10 Tax=Ebola-like viruses RepID=VP30_EBOZ5 E=4e-18 s/c=0.78 id=38% cov=92% ----ITLLTLIKTAEHWARQDIRTIEDSKLRALLTLCAVMTRKFSKSQLSLLCETHLRREGLGQDQAEPVLEVYQRLHSDKGGSFEAALWQQWDRQSLIM FITAFLNIALQLPCESSAVVVS------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * N 1 * * * * * * * * * * * 0 * * * * * * * * 1 0 * * * * * * 1000 0 0 R 2 * * * * * * * * 1000 * * * * * 1000 * * * * * 2 0 * * * * * * 1251 0 0 D 3 * * 0 * * * * * * * * * * * * * * * * * 3 0 * * * * * * 1251 0 0 I 4 * * * * * * * 1000 * * * * * * * * * 1000 * * 4 0 * * * * * * 1251 0 0 L 5 * * * * * * * 2062 * 925 * * * * * * * 2097 * * 5 0 * * * * * * 1753 0 0 T 6 * * * * * * * * * * * * * * * * 0 * * * 6 0 * * * * * * 1753 0 0 L 7 * * * * * * * * * 0 * * * * * * * * * * 7 0 * * * * * * 1753 0 0 E 8 * * * 925 * * * * * 2062 * * * * * 2097 * * * * 8 0 * * * * * * 1753 0 0 N 9 * * * * * * * * * * 2097 925 * * * * 2062 * * * 9 0 * * * * * * 1753 0 0 L 10 * * * * * * * * * 0 * * * * * * * * * * 10 0 * * * * * * 1753 0 0 G 11 * * * * * 925 * 1080 * * * * * * * * * * * * 11 0 * * * * * * 1753 0 0 D 12 * * 1932 2097 * * 1917 * 2062 * * * * * * * * * * * 12 0 * * * * * * 1753 0 0 I 13 * * * * * * * 925 * * * * * * * * 1080 * * * 13 0 * * * * * * 1753 0 0 L 14 1080 * * * * * * * * 925 * * * * * * * * * * 14 0 * * * * * * 1753 0 0 K 15 * * * 1080 * * * * 1932 * * * * * * 1917 * * * * 15 0 * * * * * * 1753 0 0 Y 16 * * * * * * 2062 * * * * * * * * * * * * 395 16 0 * * * * * * 1753 0 0 L 17 * * * * * * * * * 925 * * * * * * * * 1080 * 17 0 * * * * * * 1753 0 0 N 18 2062 * * * * * 1917 * * * * 1932 * * * 2097 * * * * 18 0 * * * * * * 1753 0 0 S 19 * * * * * * * * 2097 * * * * * 988 1932 * * * * 19 0 * * * * * * 1753 0 0 A 20 1932 * * * * * * * * * * * * 1080 * 1917 * * * * 20 0 * * * * * * 1753 0 0 D 21 * * 444 1917 * * * * * * * * * * * * * * * * 21 0 * * * * * * 1753 0 0 L 22 * * * * * * * 438 * 1932 * * * * * * * * * * 22 0 * * * * * * 1753 0 0 T 23 * * * * * 1917 * * 2097 * * * * * 2062 * 1932 * * * 23 0 * * * * * * 1753 0 0 T 24 * * * * * * * * 1917 * * 2097 * * * * 996 * * * 24 0 * * * * * * 1753 0 0 L 25 * * * * * * * 1080 * 925 * * * * * * * * * * 25 0 * * * * * * 1753 0 0 D 26 * * 395 2062 * * * * * * * * * * * * * * * * 26 0 * * * * * * 1753 0 0 E 27 * * 1080 925 * * * * * * * * * * * * * * * * 27 0 * * * * * * 1753 0 0 V 28 * * * * * * * * * * * * * * * 1080 1917 1932 * * 28 0 * * * * * * 1753 0 0 S 29 * * * * * * * * 2062 * * * * * 2097 925 * * * * 29 0 * * * * * * 1753 0 0 M 30 * * * * * * * * * 438 1932 * * * * * * * * * 30 0 * * * * * * 1753 0 0 R 31 * * * * * * * * * * * * * * 0 * * * * * 31 0 * * * * * * 1753 0 0 A 32 0 * * * * * * * * * * * * * * * * * * * 32 0 * * * * * * 1753 0 0 A 33 925 * * * * * * * * 1080 * * * * * * * * * * 33 0 * * * * * * 1753 0 0 L 34 * * * * * * * * * 0 * * * * * * * * * * 34 0 * * * * * * 1753 0 0 S 35 * * * * * * * * * * * * * * * 925 1080 * * * 35 0 * * * * * * 1753 0 0 L 36 * * * * * * * * * 0 * * * * * * * * * * 36 0 * * * * * * 1753 0 0 T 37 * 1080 * * * * * * * * * * * * * * 925 * * * 37 0 * * * * * * 1753 0 0 C 38 1080 925 * * * * * * * * * * * * * * * * * * 38 0 * * * * * * 1753 0 0 A 39 925 * * * * * * * * * * * * * * * * 1080 * * 39 0 * * * * * * 1753 0 0 G 40 * * * * * 925 * * * * 1080 * * * * * * * * * 40 0 * * * * * * 1753 0 0 I 41 * * * * * * * 925 * * * * * * * * 1080 * * * 41 0 * * * * * * 1753 0 0 R 42 * * * * * * * * * * * * * * 0 * * * * * 42 0 * * * * * * 1753 0 0 K 43 * * * * * * * * 0 * * * * * * * * * * * 43 0 * * * * * * 1753 0 0 T 44 * * * * 1080 * * * * * * * * * * * 925 * * * 44 0 * * * * * * 1753 0 0 S 45 * * * * * * * * * * * 1917 * * * 444 * * * * 45 0 * * * * * * 1753 0 0 R 46 * * * * * * * * 1080 * * * * * 925 * * * * * 46 0 * * * * * * 1753 0 0 S 47 * * * * * * * * * * * * * * * 0 * * * * 47 0 * * * * * * 1753 0 0 M 48 * * * * * * * * * 1917 1932 * * 1080 * * * * * * 48 0 * * * * * * 1753 0 0 I 49 * * * * * * * 925 * 1080 * * * * * * * * * * 49 0 * * * * * * 1753 0 0 N 50 * * * * * * * * * * * 925 * * * 1080 * * * * 50 0 * * * * * * 1753 0 0 T 51 * * * * * * * * * 1080 * * * * * * 925 * * * 51 0 * * * * * * 1753 0 0 L 52 * * * * * * * * * 444 1917 * * * * * * * * * 52 0 * * * * * * 1753 0 0 T 53 * 1080 * * * * * * * * * * * * * * 925 * * * 53 0 * * * * * * 1753 0 0 E 54 * * * 0 * * * * * * * * * * * * * * * * 54 0 * * * * * * 1753 0 0 Q 55 * * * * * * * * * 1917 * * * 1932 * 2097 2062 * * * 55 0 * * * * * * 1753 0 0 H 56 * * * * * * 0 * * * * * * * * * * * * * 56 0 * * * * * * 1753 0 0 V 57 * * * * * * * 1917 * 1080 * * * * * * * 1932 * * 57 0 * * * * * * 1753 0 0 S 58 * * * * * * * * * * * 1917 * * 1080 1932 * * * * 58 0 * * * * * * 1753 0 0 A 59 1932 * * * * * 1917 * * * * * * * 1080 * * * * * 59 0 * * * * * * 1753 0 0 E 60 * * * 0 * * * * * * * * * * * * * * * * 60 0 * * * * * * 1753 0 0 N 61 * * * * * 1080 * * * * * 925 * * * * * * * * 61 0 * * * * * * 1753 0 0 L 62 * * * * * * * * * 0 * * * * * * * * * * 62 0 * * * * * * 1753 0 0 S 63 * * * * * 1080 * * * * * * 1917 * * 1932 * * * * 63 0 * * * * * * 1753 0 0 P 64 * * * * * * * * * * * * 1932 438 * * * * * * 64 0 * * * * * * 1753 0 0 D 65 * * 0 * * * * * * * * * * * * * * * * * 65 0 * * * * * * 1753 0 0 Q 66 * * * * * * * * * * * * * 0 * * * * * * 66 0 * * * * * * 1753 0 0 T 67 2062 * * * * * * * * * * 1917 * * * 2097 1932 * * * 67 0 * * * * * * 1753 0 0 Q 68 * * * 1080 * 1917 * * * * * * * 1932 * * * * * * 68 0 * * * * * * 1753 0 0 I 69 * * * * * * * 1932 * * * * 2062 * * 2097 * 1917 * * 69 0 * * * * * * 1753 0 0 I 70 * * * * * * * 925 * * * * * * * * * 1080 * * 70 0 * * * * * * 1753 0 0 K 71 * * * * * * * * 925 1080 * * * * * * * * * * 71 0 * * * * * * 1753 0 0 Q 72 * * * 1080 * * * * * * * * * 925 * * * * * * 72 0 * * * * * * 1753 0 0 T 73 * * * * * * * * * * * * * * * * 925 1080 * * 73 0 * * * * * * 1753 0 0 Y 74 * * * * * * * * * * * * * * * * * * * 0 74 0 * * * * * * 1753 0 0 T 75 * * * * * * * * * * * * * 1080 * * 925 * * * 75 0 * * * * * * 1753 0 0 G 76 * * * * * 925 * * * * * * * * 1080 * * * * * 76 0 * * * * * * 1753 0 0 I 77 * * * * * * * 925 * 1080 * * * * * * * * * * 77 0 * * * * * * 1753 0 0 H 78 * * * * * * 0 * * * * * * * * * * * * * 78 0 * * * * * * 1753 0 0 L 79 * * * * * * * * * 925 * * * * * 1080 * * * * 79 0 * * * * * * 1753 0 0 D 80 * * 0 * * * * * * * * * * * * * * * * * 80 0 * * * * * * 1753 0 0 K 81 * * * * * * * * 0 * * * * * * * * * * * 81 0 * * * * * * 1753 0 0 G 82 * * * * * 0 * * * * * * * * * * * * * * 82 0 * * * * * * 1753 0 0 G 83 * * * * * 0 * * * * * * * * * * * * * * 83 0 * * * * * * 1753 0 0 N 84 * * * * * * * * * * * 1012 * 1917 * 2062 * * * * 84 0 * * * * * * 1753 0 0 F 85 * * * * 0 * * * * * * * * * * * * * * * 85 0 * * * * * * 1753 0 0 E 86 * * * 0 * * * * * * * * * * * * * * * * 86 0 * * * * * * 1753 0 0 A 87 0 * * * * * * * * * * * * * * * * * * * 87 0 * * * * * * 1753 0 0 A 88 0 * * * * * * * * * * * * * * * * * * * 88 0 * * * * * * 1753 0 0 L 89 * * * * * * * * * 0 * * * * * * * * * * 89 0 * * * * * * 1753 0 0 W 90 * * * * * * * * * * * * * * * * * * 0 * 90 0 * * * * * * 1753 0 0 K 91 * * * * * * * * 1932 * * * * 438 * * * * * * 91 0 * * * * * * 1753 0 0 N 92 * * * * * 1917 * * * * * 1932 * 1080 * * * * * * 92 0 * * * * * * 1753 0 0 W 93 * * * * * * * * * * * * * * * * * * 0 * 93 0 * * * * * * 1753 0 0 D 94 * * 0 * * * * * * * * * * * * * * * * * 94 0 * * * * * * 1753 0 0 R 95 * * * * * * * * 1917 * * * * * 444 * * * * * 95 0 * * * * * * 1753 0 0 R 96 * * * * * * * * * * * * * 1080 925 * * * * * 96 0 * * * * * * 1753 0 0 S 97 * * * * * * * * * * * * * * * 0 * * * * 97 0 * * * * * * 1753 0 0 I 98 * * * * * * * 925 * 1080 * * * * * * * * * * 98 0 * * * * * * 1753 0 0 S 99 * * * * * * * 1080 * * * * * * * 925 * * * * 99 0 * * * * * * 1753 0 0 L 100 * * * * * * * * * 925 1080 * * * * * * * * * 100 0 * * * * * * 1753 0 0 F 101 * * * * 0 * * * * * * * * * * * * * * * 101 0 * * * * * * 1753 0 0 L 102 * * * * * * * 1080 * 1932 * * * * * * * 1917 * * 102 0 * * * * * * 1753 0 0 Q 103 * * * * * * * * * * * * * 925 * * 1080 * * * 103 0 * * * * * * 1753 0 0 A 104 0 * * * * * * * * * * * * * * * * * * * 104 0 * * * * * * 1753 0 0 A 105 925 * * * 1080 * * * * * * * * * * * * * * * 105 0 * * * * * * 1753 0 0 I 106 * * * * * * * 1932 * 438 * * * * * * * * * * 106 0 * * * * * * 1753 0 0 S 107 * * * * * * * * * * * 1080 * * * 1932 * * * 1917 107 0 * * * * * * 1753 0 0 V 108 * * * * * * * 1080 * * * * * * * * * 925 * * 108 0 * * * * * * 1753 0 0 L 109 1080 * * * * * * * * 1932 1917 * * * * * * * * * 109 0 * * * * * * 1753 0 0 N 110 * * * * * * * * * 1080 * 925 * * * * * * * * 110 0 * * * * * * 1753 0 0 T 111 * * * * * * * * * * * 1917 * 1080 * * 1932 * * * 111 0 * * * * * * 1753 0 0 T 112 * * * * * * * 1917 * 1080 * * * * * * 1932 * * * 112 0 * * * * * * 1753 0 0 P 113 * * * * * * * * * * * * 0 * * * * * * * 113 0 * * * * * * 1753 0 0 C 114 * 0 * * * * * * * * * * * * * * * * * * 114 0 * * * * * * 1753 0 0 E 115 * * * 0 * * * * * * * * * * * * * * * * 115 0 * * * * * * 1753 0 0 S 116 * * * * * * * * * * * * * * * 0 * * * * 116 0 * * * * * * 1753 0 0 S 117 * * * * * * * * * * * * * * * 0 * * * * 117 0 * * * * * * 1753 0 0 K 118 2062 * * * * * * 1917 1932 * * * * * * 2097 * * * * 118 0 * * * * * * 1753 0 0 S 119 * * * * * * * * * * * * * * * 925 * 1080 * * 119 0 * * * * * * 1753 0 0 V 120 * * * * * * * * * * * * * * * * * 0 * * 120 0 * * * * * * 1753 0 0 I 121 * * * * * * * 1012 * * * * * 1917 * * * 2062 * * 121 0 * * * * * * 1753 0 0 S 122 1917 * * * * * * * * * * * * * * 444 * * * * 122 0 * * * * * * 1753 0 0 A 123 1000 * * * * * * * * * * * * * * 1000 * * * * 123 0 * * * * * * 1251 0 0 Y 124 * * * * * * * * * * * * * * * * * * * 0 124 0 * * * * * * 1251 0 0 N 125 * * 1000 * * * * * * * * 1000 * * * * * * * * 125 0 * * * * * * 1251 0 0 H 126 * * * * * * 0 * * * * * * * * * * * * * 126 0 * * * * * * 1251 0 0 F 127 * * * * 0 * * * * * * * * * * * * * * * 127 0 * * * * * * 1251 0 0 L 128 * * * * * * * 1000 * 1000 * * * * * * * * * * 128 0 * * * * * * 1251 0 0 Q 129 * * * * * * * * * * * * * 0 * * * * * * 129 0 * * 0 * * * 1000 0 0 //