HHsearch 1.5
NAME  c6yarD_
FAM   
FILE  c6yarD_
COM   /bmm/www/servers/phyre2/HH/hhmake -i c6yarD_.a3m 
DATE  Sat Feb 27 08:18:35 2021
LENG  27 match states, 27 columns in multiple alignment
FILT  2 out of 6 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100)
NEFF  1.1 
EVD   0.5234  5.0438 
SEQ
>ss_dssp
CCCCCCCCCCCHHHHHHHCHHHHHHHC
>sa_dssp
EEEEEEEEEEEEDDCDEDEEEDCEECE
>ss_pred
CCCCCHHHHHHHHHHHHHCHHHHHHCC
>ss_conf
987641268999999753633888509
>Consensus
fslpxxdyxeqlaaaxkrwpllaefaq
>c6yarD_
FSLPDIDYAEQLAAALKRWPLLAEFAQ
>UniRef50_D2TJX2(29-60:62) Putative uncharacterized protein n=1 Tax=Citrobacter rodentium ICC168 RepID=D2TJX2_CITRO  E=0.001 s/c=1.40 id=82% cov=104%
FSLPEFDYTdisqrEQLAAAIKRWPLLAEFAQ
#
NULL   3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	
HMM    A	C	D	E	F	G	H	I	K	L	M	N	P	Q	R	S	T	V	W	Y	
       M->M	M->I	M->D	I->M	I->I	D->M	D->D	Neff	Neff_I	Neff_D
       0	*	*	0	*	0	*	*	*	*	
F 1    *	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	1
       0	*	*	*	*	*	*	1108	0	0	

S 2    *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	2
       0	*	*	*	*	*	*	1108	0	0	

L 3    *	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	3
       0	*	*	*	*	*	*	1108	0	0	

P 4    *	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	4
       0	*	*	*	*	*	*	1108	0	0	

D 5    *	*	1000	1000	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	5
       0	*	*	*	*	*	*	1108	0	0	

I 6    *	*	*	*	1000	*	*	1000	*	*	*	*	*	*	*	*	*	*	*	*	6
       0	*	*	*	*	*	*	1108	0	0	

D 7    *	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	7
       0	*	*	*	*	*	*	1108	0	0	

Y 8    *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	8
       0	*	*	*	*	*	*	1108	0	0	

A 9    1000	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	1000	*	*	*	9
       1000	1000	*	2322	322	*	*	1108	1000	0	

E 10   *	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	10
       0	*	*	*	*	*	*	1108	0	0	

Q 11   *	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	11
       0	*	*	*	*	*	*	1108	0	0	

L 12   *	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	12
       0	*	*	*	*	*	*	1108	0	0	

A 13   0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	13
       0	*	*	*	*	*	*	1108	0	0	

A 14   0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	14
       0	*	*	*	*	*	*	1108	0	0	

A 15   0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	15
       0	*	*	*	*	*	*	1108	0	0	

L 16   *	*	*	*	*	*	*	1000	*	1000	*	*	*	*	*	*	*	*	*	*	16
       0	*	*	*	*	*	*	1108	0	0	

K 17   *	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	17
       0	*	*	*	*	*	*	1108	0	0	

R 18   *	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	18
       0	*	*	*	*	*	*	1108	0	0	

W 19   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	19
       0	*	*	*	*	*	*	1108	0	0	

P 20   *	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	20
       0	*	*	*	*	*	*	1108	0	0	

L 21   *	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	21
       0	*	*	*	*	*	*	1108	0	0	

L 22   *	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	22
       0	*	*	*	*	*	*	1108	0	0	

A 23   0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	23
       0	*	*	*	*	*	*	1108	0	0	

E 24   *	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	24
       0	*	*	*	*	*	*	1108	0	0	

F 25   *	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	25
       0	*	*	*	*	*	*	1108	0	0	

A 26   0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	26
       0	*	*	*	*	*	*	1108	0	0	

Q 27   *	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	27
       0	*	*	0	*	*	*	1108	0	0	

//