HHsearch 1.5 NAME c6xp5Z_ FAM FILE c6xp5Z_ COM /bmm/www/servers/phyre2/HH/hhmake -i c6xp5Z_.a3m DATE Sat Mar 6 08:29:14 2021 LENG 98 match states, 98 columns in multiple alignment FILT 46 out of 50 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.1 EVD 0.4388 0.4029 SEQ >ss_dssp CCSCCCHHHHHHHHTTCCSTHHHHHHHHTTGGGCHHHHHHHCCCTTTSSSSCTTCCCTTCSHHHHHHHSSHHHHHHHSHHHHHHHSCCCTTTCTTCCC >sa_dssp EEDECDEEEECEDDBDCDEBDDBCEBBDDEEBEDEECCEECDCCDBDCEEDCDCCEEEECDDCCEDCDCEEDBDCCDDEEDBEDDDEDDEEECEEDDE >ss_pred CCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCC >ss_conf 98750348999999960499999999830322899999998686207995034300856999999968989999840879999999999984320039 >Consensus xxxxxRFxxELEFVqxLaNpxYlxxLaxxxyfxdxxFxxYLxLxYwxxPeYxkflxYPxcLxxLxlLQxexFRxxlxxxxxxxxlxxxxxxhxxxwxx >c6xp5Z_ HGGHTRFELELEFVQALSNPEYVNWLASRKYLMNPAFVAYLDLQYWSRPPYLKYLTYPTALRMLQLLQSERFRQEILVPDVAWQLRLEGMKAAVLWHK >UniRef50_B0EI83(14-110:135) Mediator of RNA polymerase II transcription subunit, putative n=2 Tax=Entamoeba RepID=B0EI83_ENTDI E=4e-13 s/c=0.78 id=39% cov=99% -GEKKRFEYELDFLQSLANPHYIQYLAYHKYLRKPDMIHFLKyLQYWKQPNYIKFIQYPACLYYLEQLQNPDFRQACENPEIMKNI-IDQHEAHFTYYK >UniRef50_Q17DI7(20-107:218) Mediator of RNA polymerase II transcription subunit 31 n=5 Tax=Neoptera RepID=MED31_AEDAE E=3e-23 s/c=1.24 id=41% cov=90% ---KLRFQAELEFVQCLANPNYLHFLAQRGFFKDSNFINYLKyLLHWKDPEMAKYLKYPMCLYFLDLLQYEHFRREIVNAQCCKFIDDQAI-------- >UniRef50_Q5K785(27-123:180) Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Filobasidiella neoformans RepID=MED31_CRYNE E=5e-21 s/c=1.05 id=39% cov=99% HANLVRFQSELEFIQCLAHPQYLHELHIQGYLGKPAFLNYLKyLEYWREPQYVRFIIYPTCLVYLTLLQTELFRSRLGDMGFITELMRVGSRHHATW-- >UniRef50_A8Q301(47-141:155) Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8Q301_MALGO E=1e-18 s/c=0.99 id=38% cov=96% ---QQRFSRDLEFLSALSNPYYLHQLSQQGYFEDEAFLHYLEyLDYFRAPRYVKYLTYPQSLYFLDLLKHEAFRSAVADSAWPHDTAARQMAHWATW-- >UniRef50_Q22Y25(36-114:149) Putative uncharacterized protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q22Y25_TETTH E=9e-12 s/c=0.91 id=37% cov=81% ---YQRFQLDLEFVNMLANPYYILQLQEYDYFSNERFQNYLKyLSYFKQPEYFKFVKYPLGIKMLDLIQQDKFIENLSNNGI----------------- >UniRef50_C5LD39(15-102:134) Mediator of RNA polymerase II transcription subunit, putative n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5LD39_9ALVE E=5e-11 s/c=0.78 id=38% cov=88% ---HVRLLNDAEFAQCLLNVDYVMWLASEGFFQDEAFLNYLKyLEYLRQPSYFHLLVYPSAMDMIRILQCPSVRQQLLKEPTAARAVLQ---------- >UniRef50_A7AMM2(24-118:125) SOH1 family protein n=1 Tax=Babesia bovis RepID=A7AMM2_BABBO E=6e-24 s/c=1.17 id=38% cov=97% HNDQMRFEAELEFVQCLGNPHYLHFLATRGYFEDRRFRAYISyLQYFRLPQYIQYVKYPYCIRILELLLDDSFVQSLSNQMAIDAIEHQLMAHWI---- >UniRef50_C6LS10(7-84:132) SOH1 protein, putative n=2 Tax=Giardia intestinalis RepID=C6LS10_GIALA E=4e-17 s/c=1.14 id=42% cov=80% --DHIRLQVDLEFVHLLANLEYVQSLLDAQYFEDEKFRTYLRyLQYIRRPEYSCYVKYPRALYMLEKLTDPTFYSALLAP------------------- >UniRef50_B8M824(9-90:115) RNA polymerase II mediator complex subunit Soh1, putative n=1 Tax=Talaromyces stipitatus ATCC 10500 RepID=B8M824_TALSN E=8e-15 s/c=0.99 id=40% cov=77% ---------------SLTNPRFTLELDDEASSsasgkEARAFQAYLAylYSYWKTPEYAQFLTHPGAtLRALRLLQEDSFRRDIIRPQVIESLLAGG--- ------ # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * H 1 * * * * * * 689 * * * * * * * * * * * * 1397 1 0 * * * * * * 2284 0 0 G 2 3118 * 3161 * * 730 * * * * * 2557 * * * * * * * * 2 0 * * * * * * 2582 0 0 G 3 * * 1444 2148 * 1729 * * * * * 3248 * * * * * * * * 3 0 * * * * * * 2702 0 0 H 4 * * 4963 * 5133 * 2424 * 1971 4681 * 4534 * 3452 2645 * * * * 2602 4 0 * * * * * * 3012 0 0 T 5 4166 * * * * * * 4337 2849 3384 4343 5328 3588 2744 5705 3727 2535 3532 * * 5 0 * * * * * * 3024 0 0 R 6 * * * * * * * * * * * * * * 0 * * * * * 6 0 * * * * * * 3065 0 0 F 7 * * * * 287 * * * * 3371 * * * * * * * * 3581 * 7 0 * * * * * * 3072 0 0 E 8 5414 * * 1173 * * * 4818 * 3134 * * * 2187 * 4013 3725 5235 * * 8 0 * * * * * * 3072 0 0 L 9 3260 4978 * * * * * 3203 * 1523 3795 4160 * * 3894 4611 * 2934 * 4633 9 0 * * * * * * 3072 0 0 E 10 * * 2296 376 * * * * * * * * * 5262 * * * * * * 10 0 * * * * * * 3072 0 0 L 11 4160 4250 * * * * * * * 166 * * * * * * * * * * 11 0 * * * * * * 3072 0 0 E 12 * * 4633 59 * * * * * * * * * * * * * * * * 12 0 * * * * * * 3072 0 0 F 13 * * * * 0 * * * * * * * * * * * * * * * 13 0 * * * * * * 3072 0 0 V 14 4160 * * * * * * 3060 * 3130 * * * * * * * 494 * * 14 0 * * * * * * 3072 0 0 Q 15 * * * * * * 4620 * * 4417 5694 4819 * 390 * 3404 * * * * 15 0 * * * * * * 3072 0 0 A 16 2591 1756 * * * * * * * 3177 4318 * * * * 1406 * * * * 16 0 * * * * * * 3107 0 0 L 17 * * * * * * * * * 0 * * * * * * * * * * 17 0 * * * * * * 3107 0 0 S 18 690 4188 * * * 3831 * * * 4189 * * * * * 2588 4891 * * * 18 0 * * * * * * 3107 0 0 N 19 * * 5598 * * * 5359 * * * * 106 * * * 5271 * * * * 19 0 * * * * * * 3107 0 0 P 20 * * * * * * * 3049 * 4654 * * 438 * 5277 * * 3728 * * 20 0 * * * * * * 3107 0 0 E 21 5271 * 2786 4156 * * 3066 * * 5873 * 3482 4539 2838 3887 * 4142 5943 5913 2272 21 38 * 5277 * * * * 3107 0 0 Y 22 * * * * 4881 * * * * * * * * * * * * * * 50 22 0 * * * * 0 * 3098 0 1000 V 23 * * * * * * * 2251 * 833 * * * * * * 4891 2359 * * 23 0 * * * * * * 3107 0 0 N 24 * * * * * * 2193 * 4283 3894 4189 1962 * 3340 4170 2951 4693 * * 5116 24 0 * * * * * * 3107 0 0 W 25 * * * 4106 2242 * 2043 * * * * * * 3584 * 4175 * * 3126 2092 25 33 5468 * 0 * * * 3107 1000 0 L 26 * * * * * * * * * 38 5277 * * * * * * * * * 26 0 * * * * * * 3107 0 0 A 27 517 * 4891 * * * 5359 * * 4654 * * * 3945 * 4039 4419 * * 5024 27 93 3997 * 4443 68 * * 3107 1306 0 S 28 * * 3108 3959 * * 6212 5359 4304 5630 * * * 1639 5372 2731 3209 3892 * 4650 28 21 6143 * 4087 87 * * 3107 1000 0 R 29 4654 * * 2443 * * 4147 * 5116 * * 2077 * 2664 2458 4440 4850 * * 4897 29 21 6094 * 4000 93 * * 3107 1000 0 K 30 4891 * 4267 5355 * 1612 * * 2473 * * 3063 5606 3455 2950 5511 * * * * 30 38 5271 * 2807 222 * * 3107 1000 0 Y 31 5630 5960 4352 * 3129 * 5372 4142 * 4933 * * * * 5511 4891 5606 * * 711 31 0 * * * * * * 3107 0 0 L 32 * * * 5511 815 * * * * 1816 * * * * * 3489 6143 * 5468 * 32 49 4891 * 2322 322 * * 3107 1000 0 M 33 6143 * 3122 1814 * 4680 * * 2928 * 5931 3493 * 2696 3929 3820 5632 * * * 33 0 * * * * * * 3107 0 0 N 34 4205 * 791 4441 * * * * 2872 * * 3900 * 5996 * 3288 * * * * 34 0 * * * * * * 3107 0 0 P 35 * * 5116 1631 * * * * 4288 * * * 1345 4856 3430 4458 * * * 5024 35 72 4352 * 1995 417 * * 3107 1099 0 A 36 1277 * 4650 3405 * * * * 4654 * * 3487 5276 5116 3027 2982 * * * 5628 36 0 * * * * * * 3107 0 0 F 37 * * * * 89 * * * * * 4650 * * * * * * * * 5632 37 0 * * * * * * 3107 0 0 V 38 3811 5257 * * * * * 2190 4547 2516 * * * 3424 3039 * * 1994 * * 38 0 * * * * * * 3107 0 0 A 39 1633 * * * * 4142 4039 * * * * 1296 * 4557 4432 5372 4654 * * * 39 0 * * * * * * 3107 0 0 Y 40 * * * * 3922 * * * * * * * * * * * * * * 98 40 30 5598 * 0 * * * 3107 1000 0 L 41 * * * * * * * 4751 * 55 * * * * * * * * * * 41 29 * 5632 * * * * 3107 0 0 D 42 2974 * 3842 3987 * * 4980 * 1229 * * 5917 * 3834 3466 3885 * 5989 * 5582 42 3388 145 * 153 3314 0 * 3108 3174 1000 L 43 * * * * * * * * * 290 * * * * * * * * * 2458 43 24 5913 * 0 * * * 3107 1000 0 Q 44 * * 3404 2343 * * * * * 2360 * 4180 * 1721 * 2688 * * * * 44 0 * * * * * * 3107 0 0 Y 45 * * * * 5271 * 4878 * * * * * * * * * * * * 89 45 38 5271 * 1000 1000 * * 3107 1000 0 W 46 * * * * 2545 * * 4654 * 4189 * * * * * * * * 446 * 46 0 * * * * * * 3107 0 0 S 47 5943 4580 5257 * * * * * 1533 * * * * 4689 1340 3297 4851 * * * 47 0 * * * * * * 3107 0 0 R 48 5574 * 3935 2815 * * 4277 * 4457 4751 * 4229 * 2623 1989 4636 2950 * * * 48 0 * * * * * * 3107 0 0 P 49 * * * * 5693 * 5592 * 4425 * * * 131 * * * * * * * 49 0 * * * * * * 3099 0 0 P 50 * * 4998 964 * * * * 3676 * * 4673 2685 3503 5418 3806 * * * * 50 0 * * * * * * 3199 0 0 Y 51 * * * * 5103 * * * * * 5531 * * * * * * * * 75 51 0 * * * * * * 3271 0 0 L 52 1741 * * * 3417 * * 2655 * 3616 * * * * * 2514 * 2382 * * 52 0 * * * * * * 3271 0 0 K 53 * 4532 * * 5199 * 4151 * 1118 * * * * 2236 2321 * * * * * 53 0 * * * * * * 3271 0 0 Y 54 * 4523 * * 1160 * 4786 * * 4112 * * * * * * * * * 1269 54 0 * * * * * * 3297 0 0 L 55 * * * * * * * 1773 * 980 * * * * * * * 2319 * * 55 0 * * * * * * 3297 0 0 T 56 * * * * * * 3535 4396 2160 4786 4276 * * 4072 5240 4242 2094 2461 * * 56 0 * * * * * * 3297 0 0 Y 57 * * * * 3520 * 2918 * * * * * * * * * * * * 357 57 0 * * * * * * 3297 0 0 P 58 * * * * * * * * * * * * 38 * * 5266 * * * * 58 0 * * * * * * 3297 0 0 T 59 4716 * * * 5847 2561 2803 5144 * 4748 4781 3239 * 2755 4486 4112 3944 3932 * 4543 59 82 4176 * 0 * * * 3297 1446 0 A 60 1530 946 * * * 4748 * * * * * * * * * 4574 4176 * * * 60 220 2824 * 0 * * * 3297 1760 0 L 61 * * * * 5634 * 5206 2928 * 389 4112 * * * * * * * * * 61 0 * * * * * * 3297 0 0 R 62 5384 * 4112 * 3890 4786 2460 5206 3229 * * * * * 2240 * * 5116 * 1952 62 0 * * * * * * 3297 0 0 M 63 2918 * * * 2212 * 4751 3230 * 5206 1773 5787 * * * * * 3271 * 3902 63 0 * * * * * * 3297 0 0 L 64 * * * * * * * 4112 5206 128 * * * * * * * * * * 64 0 * * * * * * 3297 0 0 Q 65 * * 1896 1556 * * 5240 * 4242 5206 * * * 5837 2366 * 3766 * * * 65 0 * * * * * * 3297 0 0 L 66 5465 5093 * * * * 5384 3537 4486 541 5634 * * 3541 * * * * * * 66 0 * * * * * * 3297 0 0 L 67 * * * * * * * 4748 * 110 * * * * * * * 4786 * * 67 0 * * * * * * 3297 0 0 Q 68 * * * 5504 * * * 4998 4491 3781 * 5224 * 402 * * 4447 * * * 68 0 * * * * * * 3273 0 0 S 69 * 4068 2467 2785 * * 5311 5402 4724 5157 * 2708 * 3376 * 3191 4071 * * 3620 69 81 4193 * 2491 283 * * 3273 1488 0 E 70 4075 * 2901 1080 * * * * * * * * 1833 4228 * * * * * * 70 0 * * * * * * 3273 0 0 R 71 3288 * 3616 3046 * * 3941 * 4106 5003 5671 3171 * 3399 4168 2652 3314 * * * 71 0 * * * * * * 3273 0 0 F 72 * * * * 153 * * 4662 * * * * * * * * * 4033 * * 72 30 * 5583 * * * * 3252 0 0 R 73 * * * * * * * 4615 * * * * * * 188 * * 4940 * 4366 73 0 * * * * * 0 3250 0 1000 Q 74 3881 * 3396 4615 * * * * 3474 3606 * 4245 * 1975 2613 3219 4436 * * * 74 0 * * * * * 0 3250 0 1000 E 75 1872 * 2628 2787 4048 * * * * * * 3126 * 3131 3790 4093 * * * * 75 0 * * * * * 0 3250 0 1000 I 76 * 3369 * * * * * 1702 * 1402 3034 * * * * * * 3390 * * 76 0 * * * * * 0 3250 0 1000 L 77 3136 * * 3652 * 4947 4938 2473 4168 2671 5633 5674 * * 4391 2880 * 2993 * * 77 0 * * * * 0 * 3250 0 1000 V 78 4357 * 3098 * * * 3612 * 2824 * * 1856 * * 2081 4664 5702 4639 * * 78 0 * * * * * * 3247 0 0 P 79 3741 * 5398 2682 * * * * * * 4919 4623 1094 3264 4823 3960 * * * * 79 0 * * * * * * 3270 0 0 D 80 4043 * 2318 2581 * 3283 * * * * 4990 4585 3756 2042 5050 4355 * * * * 80 0 * * * * * * 3230 0 0 V 81 3942 3591 * * 1962 * * 3426 * 3382 * * * * * * 3749 1756 4797 * 81 0 * * * * * * 3251 0 0 A 82 1845 3404 * * * * * 1863 * * 3138 * 4542 * * 4042 5034 3257 * * 82 0 * * * * * * 3273 0 0 W 83 3544 * 3494 2332 * 4708 4475 * 2249 * * 2620 * 3929 4968 * 4439 * 5209 * 83 41 * 5159 * * * * 3222 0 0 Q 84 3734 * 4451 3543 2900 5023 4563 4721 3667 * 4665 4173 * 3066 2805 3744 4733 * * * 84 0 * * * * * 0 3225 0 1000 L 85 3536 * * * * * * 1657 * 1305 4973 * * * * * 4451 3128 * * 85 95 * 3975 * * 0 * 3225 0 1000 R 86 2931 * 2637 4362 * * * * * 4230 1963 4628 * 4843 2766 * * 2972 * * 86 0 * * * * 0 * 3134 0 1000 L 87 2729 * 2578 3046 * 4830 4433 2960 * 2431 * 3129 * * 4298 * * * * * 87 0 * * * * * * 3205 0 0 E 88 4847 * 2249 2384 * 4286 * * 4426 * * * * 1615 4237 * 4830 4298 * * 88 0 * * * * * * 3205 0 0 G 89 3020 * * * * 1463 * * * 4136 2348 * * 1940 * * * * * * 89 0 * * * * * * 3036 0 0 M 90 * * * * * * 3644 1597 * 4259 1923 * * 4436 * 3879 * 2649 * * 90 0 * * * * * * 2961 0 0 K 91 2812 * * 2263 * 3876 * * 1670 2785 * * * * 3037 * * * * * 91 0 * * * * * * 2973 0 0 A 92 1866 * * * * * 798 * * * * 2734 * * * * * * * * 92 0 * * * * * * 2850 0 0 A 93 2699 * * 3230 * 3850 2138 * * * * * * 3629 * 3754 * * 1796 * 93 0 * * * * * * 2826 0 0 V 94 1580 * * * 2945 * * 1935 * 3431 * * * * * * * 2462 * * 94 0 * * * * * * 2714 0 0 L 95 * * 2513 * * * * * * 3436 2939 * 3301 * * * 999 * * * 95 0 * * * * * * 2643 0 0 W 96 2939 * * * * * * * * * * * * * * 3301 * * 666 2859 96 0 * * * * * * 2643 0 0 H 97 * * * * * * 678 * * * * * * 2658 * * * * * 2207 97 0 * * * * * * 2152 0 0 K 98 * * * * * * * * 608 * * * * * 1540 * * * * * 98 0 * * 0 * * * 1877 0 0 //