HHsearch 1.5 NAME c6triB_ FAM FILE c6triB_ COM /bmm/www/servers/phyre2/HH/hhmake -i c6triB_.a3m DATE Sat Aug 22 11:13:05 2020 LENG 69 match states, 69 columns in multiple alignment FILT 110 out of 3651 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 7.3 EVD 0.3969 -0.5667 SEQ >ss_dssp CBCCHHHHHHHHHHTSSHHHHHHHHTSCHHHHHHHHTTSSCCCHHHHHHHHHHHTCCGGGHHHHHCCBC >sa_dssp EDCBEDADDCBEEDCDDCEDAAEDBECDDEDACDBBEDEDEBEEDBBEDACECAEBDEEDCEECBECEE >ss_pred CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCC >ss_conf 988799999999839869999999632167899998404781689999999981899899997451079 >Consensus xfnxxrLrxxrxxxgxtqxxlAxxlgisxxtisxxexGxxxxxxxxlxxiaxxlxixxxxlxxxffxxk >c6triB_ SYDYSSLLGKITEKCGTQYNFAIAMGLSERTVSLKLNDKVTWKDDEILKAVHVLELNPQDIPKYFFNAK >UniRef50_C8X7U0(22-79:197) Transcriptional regulator, XRE family n=8 Tax=Actinomycetales RepID=C8X7U0_NAKMY E=7e-09 s/c=1.06 id=19% cov=86% -----RLKGLRTQRGLTLTVVSASTGISKSTLSRLETGQRRPTLELLLALSHAYRVPLDDLVA------ >UniRef50_A9KZB3(9-58:221) Transcriptional regulator, XRE family n=12 Tax=root RepID=A9KZB3_SHEB9 E=5e-06 s/c=1.04 id=20% cov=74% ------VKTRMKEAGVTQSMLAEKMGMSQGAIAHWLGGKRKPSIEDIASMMNIVGI------------- >UniRef50_Q6AC68(28-81:102) Phage repressor protein n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6AC68_LEIXX E=9e-06 s/c=0.95 id=15% cov=78% -----QLRAEIAAGGSNITDMARMIGIARSALDNYVTGKRAIPIPIAYKVCESLGIDP----------- >UniRef50_A8S0R6(23-78:113) Putative uncharacterized protein n=2 Tax=Clostridium RepID=A8S0R6_9CLOT E=9e-05 s/c=0.86 id=15% cov=67% ----------------SQTQVATRLNLSRSAIANYESNTSFPSTDVVTKFALLYHTSTDYI-------- >UniRef50_A5ZQQ9(3-61:71) Putative uncharacterized protein n=2 Tax=Ruminococcaceae RepID=A5ZQQ9_9FIRM E=0.0001 s/c=0.80 id=22% cov=26% ----------------SQKKIGEILHISQRSYS------------------------------------ >UniRef50_A5TWC6(4-65:66) Possible transcriptional regulator n=2 Tax=Fusobacterium RepID=A5TWC6_FUSNP E=0.0002 s/c=0.76 id=17% cov=87% --NYKKLITLIGGKCWSVRDLVNEAKIQPKAYYDIKAGKDTLNIKTVGKIAKALDVPVDEI-------- >UniRef50_A1ZRX4(14-84:339) Putative uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZRX4_9SPHI E=0.0007 s/c=0.64 id=14% cov=94% -----KLKAIIPSNYSLVDELADLLQISTDSAYRRIRGETAVSMDEVVRLCQHYKIPLgllgaDQTDGVTFNYK >UniRef50_C6BAA5(11-75:152) Transcriptional regulator, XRE family n=6 Tax=Rhizobium RepID=C6BAA5_RHILS E=0.0002 s/c=0.73 id=15% cov=96% SYVGARIRMRRQLLGMSQERLGEQIGVTFQQVQKYEKGINRIGASRLQRIAEVLQTSP----SFFFEQE # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * S 1 * * * * * * * * * * * * * * * 0 * * * * 1 0 * * * * * * 1720 0 0 Y 2 * * * * 234 * * * * * * * * * * * * * * 2737 2 0 * * * * * * 5143 0 0 D 3 * * 1676 * * * * * 4372 * 4292 999 * * * 3516 * * * * 3 0 * * * * * * 5970 0 0 Y 4 4592 * * * 4505 2744 * * 4903 3165 * * 3272 4734 * * 4619 4906 * 1304 4 0 * * * * * * 6311 0 0 S 5 5392 * 3346 3820 * * * 5388 2750 * * 1679 5160 * 5729 2257 4535 * * 5443 5 0 * * * * * * 6790 0 0 S 6 5678 * * 4885 * * * 4778 1765 3687 * 4807 * 3533 1349 5413 * * * * 6 0 * * * * * * 7074 0 0 L 7 * * * * * * * 1520 * 770 6062 * * * * * * 4327 * * 7 0 * * * * * * 7203 0 0 L 8 6331 * * 6030 * * * 5762 1476 5720 5906 * * 5686 1070 5086 * 5885 * 5909 8 0 * * * * * * 7203 0 0 G 9 2490 * 3333 2827 6030 2586 6018 4504 5894 5233 * 5034 * 4566 4137 4457 4346 4539 * 5069 9 44 5061 * 1438 664 * * 7203 1753 0 K 10 3548 * * 3133 5946 * 4552 3663 2447 2183 6093 * * 5078 2851 * * 4952 * 4507 10 0 * * * * * * 7203 0 0 I 11 * * * * 6035 * * 2116 6126 3795 3048 * * * 920 * * 5768 * * 11 0 * * * * * * 7311 0 0 T 12 3441 * 6173 2598 6254 6102 5899 4002 2722 3289 * 5010 5828 4674 3535 4692 3719 3654 * * 12 0 * * * * * * 7547 0 0 E 13 3259 * 3314 1585 6638 6121 * 6044 3698 4437 * 6213 * 3496 3291 3591 6422 * * * 13 0 * * * * * * 7544 0 0 K 14 4161 6187 * * 5488 5274 6483 6494 1838 3030 4837 3604 * 3975 2232 5356 6183 6143 * 6407 14 0 * * * * * * 7601 0 0 C 15 6289 4497 4667 * 5766 806 3994 * 3730 * 6551 4217 6025 6290 4245 * * * * 5065 15 0 * * * * * * 7601 0 0 G 16 6288 * 6180 6348 4389 4156 * 2955 4816 1860 2571 * * * 5406 5352 * 4396 3913 3521 16 0 * * * * * * 7617 0 0 T 17 6230 * 6672 * * 6376 * * 3180 6399 * 4950 * * 6431 1559 1159 * * 6447 17 0 * * * * * * 7726 0 0 Q 18 6498 * * * * 5766 * 3943 6577 3632 4664 5865 * 757 4754 5033 6388 3788 * 6152 18 0 * * * * * * 7725 0 0 Y 19 4084 * 3371 2936 * 4757 6435 * 3032 6887 * 4641 6894 3608 2892 2846 3903 4784 * 5212 19 0 * * * * * * 7732 0 0 N 20 4141 * 2077 1994 * * 5523 * 4359 * 6422 5548 * 2798 4008 4308 6736 6400 5091 4486 20 0 * * * * * * 7732 0 0 F 21 4369 * * * 2741 * * 3473 * 1324 3506 * * * * 6773 5667 2535 * 5425 21 14 6699 * 0 * * * 7739 1000 0 A 22 466 4139 * * * 3988 6773 * * 6662 6705 * * * * 3602 6169 5701 * 6362 22 0 * * * * * * 7739 0 0 I 23 2709 * 2848 2398 5761 6095 5747 5672 2878 4542 * 5198 * 4412 3228 4276 5213 * 6843 * 23 0 * * * * * * 7739 0 0 A 24 2967 6672 4441 3353 * 5768 4718 4844 2466 3298 3995 5465 * 4857 3397 5011 7075 3686 * 6195 24 0 * * * * * * 7739 0 0 M 25 3377 4938 * * * * * 2204 * 1422 3307 * * * * 4856 3702 4067 * 6840 25 45 * 5020 * * * * 7739 0 0 G 26 4983 * 3816 4730 * 690 4937 * 4724 * * 3472 6760 5645 * 4746 * * * 6302 26 0 * * * * 0 * 7710 0 2323 L 27 * 4573 * * 6425 * * 1651 4409 2793 3589 * * 5330 6720 6428 4694 2039 5295 * 27 0 * * * * * * 7739 0 0 S 28 3957 * 3857 * * 5255 4887 6425 4000 * * 3883 4336 5477 6492 1105 3100 * * * 28 0 * * * * * * 7739 0 0 E 29 5545 * * 3342 5292 6744 5724 * 3243 4015 * 6202 3309 2771 2201 6684 3836 4078 * 4597 29 0 * * * * * * 7739 0 0 R 30 3457 6646 5290 4983 * 4436 6594 5995 3700 * 5778 4447 5547 2973 4073 1692 3496 5490 * * 30 0 * * * * * * 7739 0 0 T 31 3043 * * 6301 6425 5697 4192 * 4403 6907 6661 5127 * 4436 5759 2700 1604 4360 6452 3672 31 42 5134 * 1351 718 * * 7739 2253 0 V 32 5554 * * * 3809 * * 2150 * 1786 6576 * * * * * * 2449 6452 2418 32 0 * * * * * * 7739 0 0 S 33 4213 5043 6877 5403 6380 3635 6684 * 6301 5608 6594 3423 * 4001 5186 1336 4484 6436 6548 3446 33 0 * * * * * * 7739 0 0 L 34 4226 * 4436 4665 6937 4482 5091 * 2373 4391 * 2647 * 3855 2157 4816 5600 6657 * 5715 34 0 * * * * * * 7734 0 0 K 35 * 6505 * * 4718 * * 2104 2874 3678 4995 * * * 4478 6251 * 3868 2330 2765 35 0 * * * * * * 7734 0 0 L 36 * 5428 * 709 4858 * * 4759 5634 2543 4560 * * * * * * 4364 6530 * 36 17 6380 * 0 * * * 7734 1000 0 N 37 4129 6547 6530 5276 * 6744 5629 * 3083 6592 5699 1516 * 3998 2770 3565 4088 5951 * * 37 0 * * * * * * 7732 0 0 D 38 5595 6698 4099 6828 6450 614 6426 * 5146 * * 2601 6530 6852 6204 * * * * * 38 11 7099 * 0 * * * 7732 1000 0 K 39 4620 6802 4637 2766 * 5779 5268 4509 1892 5015 6395 4716 5783 3901 2712 5812 4122 6397 * * 39 26 5834 * 0 * * * 7732 1710 0 V 40 3884 4999 5731 5823 6300 5002 6837 4439 4122 4679 5786 3940 * 5753 2254 2994 2888 3711 * 5584 40 13 6833 * 0 * * * 7732 1000 0 T 41 4152 6980 3872 3249 * 5293 6426 4356 3635 3779 * 3402 4141 4122 3049 4223 3812 4936 * 4790 41 0 * * * * * * 7732 0 0 W 42 5711 * * * 2619 * * 3119 * 2857 4472 * 1326 * 6835 * * 3517 5315 * 42 0 * * * * * * 7732 0 0 K 43 5145 * 3571 6687 * 3991 * 7009 3467 * * 3064 3721 4299 4959 2053 2428 * * 6413 43 0 * * * * * * 7732 0 0 D 44 3229 * 4226 4529 4564 6908 * 3330 5461 2276 5025 * 3718 3949 * 3910 4409 3349 5961 5783 44 0 * * * * * * 7732 0 0 D 45 4650 * 2596 2684 6705 5735 6254 6427 3039 5635 * 3266 5218 3960 5053 3072 4390 5642 6792 5418 45 0 * * * * * * 7734 0 0 E 46 5263 * 3577 2174 4962 * 4728 4071 3966 4186 4694 3952 * 4808 4510 3972 2956 5322 * 5658 46 11 7012 * 0 * * * 7733 1000 0 I 47 2874 * * * 4339 * * 2032 * 1505 4467 * * * * 6402 * 2876 * 5385 47 0 * * * * * * 7733 0 0 L 48 4162 5693 4756 3677 4744 5063 * 3351 3354 3091 4861 5020 6527 4390 3848 5305 6792 3087 5140 4168 48 0 * * * * * * 7733 0 0 K 49 3217 6441 4471 4625 6172 5311 4827 4359 1872 3714 6075 5672 6648 4098 2741 5363 5251 * 6621 6702 49 0 * * * * * * 7733 0 0 A 50 4608 * * * 4286 * * 1206 * 1759 3771 * * * * 6195 6711 4267 * 5041 50 0 * * * * * * 7733 0 0 V 51 1276 2641 * 5830 * 6036 * 4034 6601 3494 5053 * * * 5873 3465 4994 4295 * 6172 51 13 6839 * 0 * * * 7733 1000 0 H 52 4055 6730 2594 2446 6731 5559 6510 4794 2580 5869 6734 4255 * 3701 3519 4054 5367 * * 6799 52 0 * * * * * * 7733 0 0 V 53 2309 5995 * 5004 4127 4871 4096 3536 5398 2874 5608 6681 * * 5158 5171 5299 2618 * 3628 53 11 * 7094 * * * * 7733 0 0 L 54 * * * * 2120 * * 4540 * 958 4699 * * * * 6245 * 6468 * 2745 54 23 5986 * 2454 291 * 0 7734 1635 1000 E 55 6363 * 2883 2951 * 1668 5159 * 3691 * * 2891 6399 4055 4238 4542 * * * * 55 0 * * * * 0 * 7734 0 1000 L 56 6527 3976 * * 6648 * * 2114 6115 2142 4789 * * 6762 6691 * 3985 1702 * 5792 56 0 * * * * * * 7733 0 0 N 57 6433 * 2574 5095 * * 6182 * 4541 * * 4916 2287 * 4065 2122 2273 * * * 57 27 * 5755 * * * * 7737 0 0 P 58 4091 * 5616 5265 6879 6692 * 3466 5084 3098 4551 6557 1864 7130 5892 6128 4009 2515 * 4767 58 33 6350 6584 2322 322 952 1050 7693 1000 1736 Q 59 4000 * 1728 2396 * 5255 6497 6787 4631 6840 8109 2504 * 4961 5422 3677 5202 6710 * * 59 46 * 4996 * * * 0 7668 0 1677 D 60 * * 1857 1617 4089 * * 5395 4116 5296 5136 6295 6722 3399 * * 5565 6319 * 4235 60 38 6347 6185 0 * 2057 397 7460 1000 2906 I 61 4573 6353 * * 4703 * * 1961 * 1147 * * * * 4774 * 5722 2802 * * 61 0 * * * * * 0 7428 0 2951 P 62 4691 * 3315 4105 3603 3704 * 3703 5648 3346 4489 4573 5400 * * 4439 5591 2623 5383 3553 62 28 * 5712 * * 2296 329 7157 0 2951 K 63 2954 * 3007 2444 5560 3467 * 4062 3922 * 5215 6005 3316 4613 5796 3681 5573 5347 * * 63 31 5553 * 0 * 328 2299 7200 1000 2866 Y 64 * 5252 3429 3464 4138 * * 2564 5600 2942 5492 5505 * * * * 5791 3848 * 1827 64 0 * * * * 0 * 7217 0 1000 F 65 4484 * 5265 * 547 * * 5449 4587 3946 * 5027 * * * * 4107 5213 * * 65 0 * * * * * * 7065 0 0 F 66 * * * * 542 * * * * 2538 * * 5268 * * * 3988 * * 4265 66 0 * * * * * * 6628 0 0 N 67 * * * 2850 * * * * 3713 * 4656 1670 * 4773 3005 2678 3136 * * * 67 0 * * * * * * 6150 0 0 A 68 4013 * * 1824 * * * * 1914 * * * * 2569 * * * * * 2172 68 0 * * * * * * 5386 0 0 K 69 * * * 3736 * * * * 680 * * * * * 1732 * * * * * 69 0 * * 0 * * * 4857 0 0 //