HHsearch 1.5 NAME c6tdzP_ FAM FILE c6tdzP_ COM /bmm/www/servers/phyre2/HH/hhmake -i c6tdzP_.a3m DATE Sat Nov 30 08:22:27 2019 LENG 81 match states, 81 columns in multiple alignment FILT 66 out of 70 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.7 EVD 0.4298 -0.4808 SEQ >ss_dssp CCCCCCCCSGGGGTHHHHHHHHSSHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCC >sa_dssp EEEEEEEEEDDCEECBDEBDECCDEBDECCDECDDDCEECCEEEEECCEEDEDEBEECCDECDCEAEDCDEEBEECCEEEE >ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >ss_conf 945899999999999999999986266659999999999961696127879999999999999999999999999999729 >Consensus xxxxxxtvxxxxxiGAGlaxixxxGxgiGxGxxxxxaiexiaRnPexxxxixxxxilGxAxxEsxaIyaLviAllllFVxx >c6tdzP_ AIAYEVTVNGANLIGAGMAASGVGVPAIGVAMCFSSYMLAAARQPNMSAKLLPYCILGFALSEALALFTLLIALLELFVFS >UniRef50_C4K0P2(5-73:74) ATP synthase subunit c n=26 Tax=cellular organisms RepID=ATPL_RICPU E=0.0006 s/c=0.66 id=36% cov=86% ---------SLKFIGTGLMAIGMYGAALGVSNIFSSLLSSIARNPSATENLQRMALIGAGLAEAMGLFSFVIAMLLIF--- >UniRef50_P00842(73-146:147) ATP synthase subunit 9, mitochondrial n=13 Tax=Leotiomyceta RepID=ATP9_NEUCR E=5e-10 s/c=0.89 id=38% cov=89% -------VEVSKNLGMGSAAIGLTGAGIGIGLVFAALLNGVARNPALRGQLFSYAILGFAFVEAIGLFDLMVALMAKF--- >UniRef50_A5GND2(3-77:82) ATP synthase subunit c n=45 Tax=cellular organisms RepID=ATPL_SYNPW E=4e-05 s/c=0.65 id=28% cov=93% ----DLTSAASVLAAALAVGLAAIGPGIGQGTAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALVLLF--- >UniRef50_Q59550(25-102:105) ATP synthase subunit c n=4 Tax=Bacteria RepID=ATPL_MYCPN E=1e-12 s/c=0.95 id=29% cov=98% -VANKSTERLGAYIGAGITMVGGATVGLGQGYIFGKAVEAVARNPEVEKQVFKLIFIGSAISESSSIYSLLIAFILIFV-- >UniRef50_UPI0001C315C5(22-92:92) ATP synthase F0, C subunit n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C315C5 E=3e-05 s/c=0.70 id=28% cov=83% -------------IGLGLGTgLAALGTGVGLGFIFGKTIEAVSRQPELRDDIQSIQWLGFALTEATVFYGFIAGLIAFFV-- >UniRef50_Q1Q3F6(6-72:108) ATP synthase subunit c n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q3F6_9BACT E=0.0002 s/c=0.70 id=33% cov=83% ----------ALVIGIPVVAVAAFGCALAQAKVVSSAVESMARQPSVAAKVQLAMIIGIAFIESLAIYSLMISFML----- >UniRef50_D2MMZ4(3-63:74) ATP synthase subunit C n=1 Tax=Bulleidia extructa W1219 RepID=D2MMZ4_9FIRM E=0.0004 s/c=0.75 id=32% cov=70% -------------IGAGIAVFTGFMTGLGEATVAAHACDAIGKNPEAESKIRSTMILGIALSETCAIYG------------ >UniRef50_C5LFG9(109-184:186) Putative uncharacterized protein n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5LFG9_9ALVE E=3e-11 s/c=0.91 id=31% cov=95% --SQQVRCAGTSVLGAAIAVVAVGGCAQGIGQLFAALVVGIARNPSMKEDLFTYTLIGMGFLEFLAILVILIAGVLLY--- >UniRef50_C9LP12(39-111:117) ATP synthase subunit c n=1 Tax=Dialister invisus DSM 15470 RepID=C9LP12_9FIRM E=3e-05 s/c=0.68 id=24% cov=91% -----IVVQYSLIASALIAAVSAFAAAFNDAKVASHAIDGMTRQPEMQGQLFTSMLVGIGLVESIPIIAIVISLVLVF--- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * A 1 0 * * * * * * * * * * * * * * * * * * * 1 0 * * * * * * 1000 0 0 I 2 * * * * * * * 1000 * * * * * * * * * 1000 * * 2 0 * * * * * * 1630 0 0 A 3 583 * * * * * * * * * * * * * * 1590 * * * * 3 0 * * * * * * 2089 0 0 Y 4 * * * * * * * * * * * 1561 * 1590 * * * * * 1604 4 0 * * * * * * 2089 0 0 E 5 * * 1846 2522 * * * * 2425 * * 2564 * 2377 * * * * * * 5 0 * * * * * * 2654 0 0 V 6 * * * * * * * 2085 * 1699 * * * * * 3136 * 1546 * * 6 0 * * * * * * 3155 0 0 T 7 * * * * * * * * * * * * * * 3208 3374 572 3026 * * 7 0 * * * * * * 3317 0 0 V 8 4709 4028 * 4611 * * * 3415 * 2814 * 4347 * * * 4875 4244 1036 * * 8 0 * * * * * * 3589 0 0 N 9 1498 * * 2956 * * 4581 * 4958 3966 4434 4422 * 2383 4926 4018 * * * * 9 0 * * * * * * 3724 0 0 G 10 1480 * * * * 1385 * 5360 * 4368 * * * * * 3660 * 4112 * 4355 10 0 * * * * * * 3833 0 0 A 11 1376 * * * 5623 3737 * 4209 * 2839 4057 * * * * 2840 5542 3258 * * 11 0 * * * * * * 3863 0 0 N 12 2005 * * * * 5127 5339 5677 1998 3973 * 5045 * 5189 4002 2574 4657 4783 * * 12 0 * * * * * * 3875 0 0 L 13 3754 * 5648 6006 3526 * * 2750 5425 3077 3211 5381 * * * 4027 5374 3109 * 2475 13 0 * * * * * * 3875 0 0 I 14 3961 * * * 5031 * * 1093 * 1843 * * * * * * * 2663 * * 14 0 * * * * * * 3974 0 0 G 15 3182 * * * * 440 * * * * * * * * * 3377 4154 * * * 15 0 * * * * * * 3867 0 0 A 16 378 5651 * * * 5743 * 5283 * 4861 4614 * * * * * 3906 5377 * * 16 0 * * * * * * 3867 0 0 G 17 3150 * * * * 416 * * 5319 3982 * * 5283 * * 5377 * * * * 17 23 5958 * 1585 585 * * 3867 1000 0 M 18 4058 4242 * * 5824 * * 1822 * 1227 4228 * * * 5319 5670 * 4031 * * 18 0 * * * * * * 3867 0 0 A 19 551 4358 5319 * * 4861 * * * 5377 5327 * * * * 5944 3520 4135 * * 19 46 5006 * 0 * * * 3867 1000 0 A 20 1769 * * * * 5000 * 4862 * 3488 2053 * * * * 5630 2859 2712 * * 20 264 2578 * 0 * * * 3867 2605 0 S 21 4780 * * * 3860 * * 1250 * 2547 3767 * * * * 5169 5342 2495 * * 21 0 * * * * * * 3863 0 0 G 22 1372 * * * * 1112 * * 5330 * * * * * * 3516 4691 * * * 22 0 * * * * * * 3863 0 0 V 23 1530 5452 * * * 2801 * 5705 * 2852 3963 * * * * 3974 6111 2416 * * 23 0 * * * * * * 3863 0 0 G 24 2709 * * * 3097 2072 * 2069 * 2995 5065 * * * * * 3745 * * 5372 24 0 * * * * * * 3880 0 0 V 25 3975 * * * 5849 344 * * * 5136 4527 * * * * * 5977 4526 * * 25 22 * 6069 * * * * 3948 0 0 P 26 2102 3517 * * * 5460 * * * * * * 2178 * * 3116 3937 1969 * * 26 0 * * * * * 0 3941 0 1000 A 27 1940 * * * * 543 * * * * * * * * * 4235 * * * * 27 0 * * * * * 0 3905 0 1000 I 28 3303 * * * 5077 * * 1522 5548 2400 5971 * * 3675 5520 * * 2366 * * 28 0 * * * * 0 * 3871 0 1000 G 29 5710 * * * * 97 * * * * 5760 5202 * * * * * * * * 29 0 * * * * * * 3886 0 0 V 30 * * 4397 2703 * * * 2028 * 2955 6047 5776 * 1888 * * * 3045 * * 30 0 * * * * * * 3886 0 0 A 31 3499 * * * * 166 * * * * * * * * * 5608 * * * * 31 0 * * * * * * 3886 0 0 M 32 5571 * * 5553 3221 * * 3138 3954 2995 4167 2614 * 4948 5173 5256 3138 5226 * 3305 32 0 * * * * * * 3886 0 0 C 33 1546 5261 * * * 4557 * 2634 * 2971 5226 * * * * 5760 * 1970 * * 33 0 * * * * * * 3886 0 0 F 34 2029 * * * 1283 5111 * 5776 * 3971 * * * * * 5414 3724 3127 5699 * 34 0 * * * * * * 3886 0 0 S 35 1917 * * * * 1423 * * 4569 * * * * 4626 6465 2100 5558 * * 6154 35 0 * * * * * * 3884 0 0 S 36 2295 5561 * * * 4166 3827 * 1784 5404 * 3893 * 5436 5089 2499 4709 * * * 36 0 * * * * * * 3924 0 0 Y 37 1055 5404 * * 4681 5584 * * * 1710 * * * * * * 3259 * * 5320 37 0 * * * * * * 3924 0 0 M 38 3626 3316 * * 6120 * * 1888 * 3325 3480 5975 * * * 5864 * 1683 * * 38 0 * * * * * * 3924 0 0 L 39 4835 * 3389 1160 * 5267 5905 4212 * 3790 5052 3936 * 5195 * 3739 5397 4985 * * 39 0 * * * * * * 3901 0 0 A 40 1313 * * * * 1359 * * * * * * * * * 2622 5694 * 5267 * 40 0 * * * * * * 3901 0 0 A 41 4285 5554 * * * * * 1729 * 5397 2651 * * * * * 3173 1786 * 4569 41 0 * * * * * * 3901 0 0 A 42 615 * * * * 2389 * * * * * * * * * 3674 4170 5481 * * 42 0 * * * * * * 3901 0 0 R 43 * * * * * * * * 4780 * 5697 * * * 83 * * * * * 43 0 * * * * * * 3901 0 0 Q 44 * * * * * * * 5481 * * * 886 * 1196 * * * * * * 44 0 * * * * * * 3901 0 0 P 45 * * * 5267 * * * * * * * * 38 * * * * * * * 45 0 * * * * * * 3901 0 0 N 46 3803 * 4676 885 * 5148 * * * * * 3085 * * * 2310 * * * * 46 0 * * * * * * 3901 0 0 M 47 1485 6340 * * * * * 3490 * 2341 2497 * * 4567 * 4347 * 3724 * * 47 0 * * * * * * 3901 0 0 S 48 2447 * * 3445 * 6030 * 6257 2391 4791 * * * 3373 3036 2662 3425 * * * 48 0 * * * * * * 3901 0 0 A 49 3526 * 3474 3637 * 1497 * * 3452 * * 4500 3707 4569 * 2896 * * * * 49 0 * * * * * * 3901 0 0 K 50 * * 2768 3821 * * 5260 * 1487 * 5554 3420 * 2400 * 5907 3917 6309 * * 50 0 * * * * * * 3901 0 0 L 51 * * * * * * * 1423 * 1222 5884 * * * * 5905 * 2602 * * 51 0 * * * * * * 3901 0 0 L 52 * * * 5694 1500 * * 4238 * 3895 4946 5872 * 2952 2553 6371 3066 5262 * * 52 0 * * * * * * 3901 0 0 P 53 5037 * * * * 2997 * * 3956 3731 * 5554 4562 * 3139 2360 1759 4752 * * 53 0 * * * * * * 3901 0 0 Y 54 5744 * * * 4726 * * 4224 * 3728 5623 4390 6470 * 6204 5338 1431 5137 * 1748 54 0 * * * * * * 3901 0 0 C 55 2621 5309 * * 4927 4460 * 6320 * 2551 1443 * * 5216 * * 2917 * 5397 * 55 0 * * * * * * 3901 0 0 I 56 * * * * 3110 * * 1242 * 1635 4025 * * * * * * 6076 3985 * 56 0 * * * * * * 3901 0 0 L 57 * * * * * * * 1636 * 1058 4300 * * * * * * 2763 * * 57 0 * * * * * * 3901 0 0 G 58 4562 * * * * 164 * * * * * * * * * 3934 * * * * 58 0 * * * * * * 3901 0 0 F 59 3045 5074 * * 1872 * * 3755 * 2332 3210 * * 3583 * 4786 6076 4046 * * 59 0 * * * * * * 3901 0 0 A 60 407 * * * * 2122 * * * * * * * * * * * 5961 * * 60 0 * * * * * * 3901 0 0 L 61 * * * * 1756 * * 2940 * 1376 4294 * * * * * * 2865 * * 61 0 * * * * * * 3901 0 0 S 62 2290 * * * * * * 2629 * 3761 3898 * * * * 2543 2463 2836 * * 62 0 * * * * * * 3901 0 0 E 63 * * * 0 * * * * * * * * * * * * * * * * 63 0 * * * * * * 3901 0 0 A 64 1389 * * * 3761 5872 * * * 5593 * * * * * 1619 2718 5102 * * 64 0 * * * * * * 3901 0 0 L 65 4113 6158 * * 5593 5239 * 2902 * 1864 3613 * * * * 4041 2486 2721 * * 65 0 * * * * * * 3901 0 0 A 66 1224 6365 * 6140 * 1838 * 5961 * * * * 4214 * * 3593 3739 4711 * * 66 0 * * * * * * 3901 0 0 L 67 * * * * 5216 * * 633 * 1607 * * * * * * * * * * 67 0 * * * * * * 3901 0 0 F 68 * * * * 1795 * * 3058 * 4263 * * * * * * * 4992 * 976 68 0 * * * * * * 3901 0 0 T 69 1205 2910 5940 * * 2426 * * * * * * * * * 2523 5309 4985 * * 69 0 * * * * * * 3901 0 0 L 70 * * * * 2973 * * 3471 * 542 * * 5898 * * * 5704 4063 * * 70 0 * * * * * * 3898 0 0 L 71 5882 * * * 5854 * * 2601 * 2198 2548 * * * * * * 1279 * * 71 0 * * * * * * 3898 0 0 I 72 4677 * * * * 6129 * 1495 * 5549 2793 * * * * * 4099 1443 * * 72 0 * * * * * * 3898 0 0 A 73 586 * * * 6054 4185 * * * * * 6018 * * * 2285 * 5255 * 5882 73 0 * * * * * * 3898 0 0 L 74 3981 * * * 1527 4981 * 3528 * 1201 4786 * * * * * * * * * 74 0 * * * * * * 3898 0 0 L 75 6235 * * * * * * 1609 * 1230 3596 * * * * * * 2738 * * 75 0 * * * * * * 3898 0 0 E 76 4507 * * 5261 * * * 1898 * 763 4140 * * * * * * 5996 * * 76 0 * * * * * * 3895 0 0 L 77 * * * * 5091 * * 2065 5880 675 5114 * * * * * * 4067 * * 77 0 * * * * * * 3835 0 0 F 78 * * * * 362 * * * * * * * * * * * * * * 2172 78 0 * * * * * * 3819 0 0 V 79 4371 * * * * * * * * 3411 * * * * * * * 222 * * 79 0 * * * * * * 3333 0 0 F 80 * * * * 298 * * * * * * * * * * * * * * 2422 80 0 * * * * * * 2083 0 0 S 81 * * * * * * * * * * * * * * * 0 * * * * 81 0 * * 0 * * * 1000 0 0 //