HHsearch 1.5 NAME c6tb4J_ FAM FILE c6tb4J_ COM /bmm/www/servers/phyre2/HH/hhmake -i c6tb4J_.a3m DATE Sat Feb 1 08:25:47 2020 LENG 96 match states, 96 columns in multiple alignment FILT 39 out of 43 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.6 EVD 0.3696 -1.7994 SEQ >ss_dssp CCHHHHHHSSSTTSCCSSCHHHHHHHHHHTTCCCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCCCCCCCCHHHHHHHHHHTTCCCCCCCCC >sa_dssp EEEDDDECADDEEDDCEDEDEDBDEEBEEEEEEDEDCCDBCCDBDDDDEDEDDBDECBEDCCDEDEEEEEEEEEDDDBDDCACDEDEDEEDCEEEE >ss_pred CHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCC >ss_conf 989999984106899989989999999971988877899999999999999999999999988751545760111998999999818747799999 >Consensus xlxeflxxlxdxxyxPxIPDxvtxxyLxxaGfxxxDxrvxRlisLatqKFisdIaxDAxqxxrxRxxxxxkxvLtmeDLxxALxeyGinixrPxyy >c6tb4J_ TLEEILEMMEDEEFTPIIPDAVTDYYLAKNGFETSDIKIKRILALATQKFISDIAQDAYEYSRIRSSSSNKVVLTMDDLRSALGEYGINVKRPNFY >UniRef50_A2DIF6(17-109:123) Putative uncharacterized protein n=2 Tax=Trichomonas vaginalis RepID=A2DIF6_TRIVA E=1e-09 s/c=0.69 id=33% cov=93% -------MIKLQDYPSPIPDSVIKHICAESGLNTTDARVTSAISVVTQKFISEVLRNCSDFAKARAAQENpgkirKLDLQFSDLKQALAKRGIHVNRPEF - >UniRef50_B4N0H5(63-172:173) GK24581 n=1 Tax=Drosophila willistoni RepID=B4N0H5_DROWI E=1e-24 s/c=1.04 id=37% cov=98% -VDELMRQLKD--YQPTVPDALTVNLLKQAGFGTVDSQLVRLISVSAQKFISDIVNDALQHCKTRSTniqhssghssnkdkknpKDRKYTLAMEDLVPAL ADHGITVRKPQYF >UniRef50_Q8SU50(29-132:133) Similarity to TRANSCRIPTION INITIATION FACTOR TFIID 30kDa SUBUNIT n=2 Tax=Apansporoblastina RepID=Q8SU50_ENCCU E=2e-24 s/c=1.09 id=39% cov=99% --EEFNELKQNlDSYTPLLPESVTDYFMEKAGVVTSDQSVKKLVSLLAHKFVTDIAVSSFQYHRInqkaaqkdkRFAKEKKPTFQLVDLEKALEEVGISI SRPHYY >UniRef50_Q01GW3(25-130:162) Putative TATA box-binding protein asso (ISS) n=1 Tax=Ostreococcus tauri RepID=Q01GW3_OSTTA E=5e-24 s/c=1.06 id=32% cov=98% -VDAFLSRLDD--CQPVIPDELTNHYLKRAGVREPDVRVTRLISLVTEQFVQSVADDAYRCAVQRHQAQakdkrergydtrdKRIVLENEDLAAALKDHG VNLHKPPYY >UniRef50_A8J8H6(34-140:154) Predicted protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8J8H6_CHLRE E=4e-16 s/c=0.80 id=31% cov=84% ----------------VVPPQLVQYYMRKSGQgpilynmsaddreANEDMRLTQVVSLASQRFLATVLNDAMQYHKMKRgagpkamkeagldPKDKRRVL RTEDLAAALqQEYGVNIRNPPYY >UniRef50_Q234H5(252-347:361) Putative uncharacterized protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q234H5_TETTH E=0.0002 s/c=0.49 id=23% cov=91% -------MQQMVDYNAKIPPILVQKILEEVGFESTDESTYKMIGMLTDKFLDEVINQIHQSRYVQMDKRSKKDkknnkdeyskLLTYDLINQLRQYGLNI CEP--- >UniRef50_A8QEB5(62-162:163) Taf, putative n=1 Tax=Brugia malayi RepID=A8QEB5_BRUMA E=6e-29 s/c=1.27 id=37% cov=99% SLRDFVN--DLDNYVPTIPDAVTIHYMKKSGVDCADSRVIRLFSLAAQKFTSDIILDAMQQARMkglgqtkKGTKETRYTLTSELLEPVLAEYGIELKRP PYF >UniRef50_D2VRR4(9-105:142) Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VRR4_NAEGR E=3e-25 s/c=1.20 id=35% cov=98% -MQEFLDSMED--YNPAIPDQIISYYLQQSGFKTTDKRVLRLVSLSAHKFLAEICKESHGFCARRTAKQQgkepRYVLATEDLYHSLKDYGINIQKPEYY >UniRef50_A9UNY9(84-184:185) Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UNY9_MONBE E=1e-24 s/c=1.13 id=41% cov=91% ----------LDDFVPVIPDEVIQYYLRKAGVDPSDQRVVRMVSLATQKFVADTALDAMNHNRHRAPSkkgkllmavlnwlvqEDNRIMGMDDLSFALKA QGVDIAKPAYY # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * T 1 * * * * * * * * * * * * * * * 1064 939 * * * 1 0 * * * * * * 2258 0 0 L 2 * * * * * * * * * 409 3301 * * * * * * 2784 * * 2 0 * * * * * * 2890 0 0 E 3 3788 * 1991 2333 * * * * 5075 * * 5128 * 4129 2905 3969 3243 4079 * * 3 0 * * * * * * 3018 0 0 E 4 3503 * 2283 566 * * * * * * * 5009 * * * * * * * * 4 0 * * * * * * 3069 0 0 I 5 * * * * 434 * * 4096 * 3146 * * * * * * * 3500 * * 5 0 * * * * * * 3069 0 0 L 6 * * * * * * * 3592 * 513 3312 3777 * * * * * 4547 * * 6 83 * 4168 * * * * 3069 0 0 E 7 3292 * 3094 2842 * 3533 * * 4780 4973 * 2410 * * 3033 2876 * 4635 * * 7 70 * 4403 * * * 0 3068 0 1127 M 8 3661 * * * * * * * 4291 3117 1864 5226 * 2074 3721 2840 * * * * 8 0 * * * * 1709 527 3413 0 1431 M 9 * * * * * * * 3897 3992 1251 1460 * * 3530 * * * * * * 9 274 * 2533 * * 0 * 3404 0 1398 E 10 4492 * 1588 2448 * * * * 2841 * 3366 * * 2299 * * * * * * 10 0 * * * * 2551 270 3474 0 1956 D 11 * * 902 * * 4922 * * * 1843 3614 4513 * * * 5179 * * * * 11 1036 4513 1093 0 * 0 * 3521 1000 1888 E 12 * * 1027 3825 * 4844 * * * * * 3843 * 3607 * * 3403 2667 * * 12 106 * 3821 * * * 0 3303 0 2747 E 13 * * 1516 2115 4403 4221 3878 * * * * 3030 * 4006 * 3920 * * * * 13 0 * * * * 174 3135 3296 0 2811 F 14 * 4832 * * 2765 * * 4613 * 5083 * * * * * * * * * 420 14 0 * * * * 0 * 3546 0 1109 T 15 2503 * * 5457 * * * 5404 5164 * * 3119 2912 2897 * 3784 2198 3707 * * 15 0 * * * * * * 3549 0 0 P 16 3688 5404 * * * * * * * * * * 313 * * 3411 * * * * 16 0 * * * * * * 3549 0 0 I 17 4878 * * * * * * 2523 3815 2425 * * 4350 5514 * 5761 1902 2492 * * 17 0 * * * * * * 3648 0 0 I 18 * * * * * * * 205 * 3786 * * * * * * * 4053 * * 18 0 * * * * * * 3648 0 0 P 19 * * * * * * * * * * * * 0 * * * * * * * 19 0 * * * * * * 3648 0 0 D 20 * * 384 4009 * * * * * * * 5582 3226 * * * 4519 * * * 20 0 * * * * * * 3648 0 0 A 21 1585 * 5928 1869 * * * 3815 * * * * * 3840 4746 2666 * 4622 * * 21 0 * * * * * * 3648 0 0 V 22 * * * * * * * 3093 * 1434 * * * * * * * 964 * * 22 0 * * * * * * 3648 0 0 T 23 * * * * * * * 2185 * 5679 * * * * * 4746 1015 2129 * * 23 0 * * * * * * 3648 0 0 D 24 4688 * 1978 3267 * 4750 5808 3539 4350 4795 5600 2977 * 2763 * 4107 * 5355 * * 24 0 * * * * * * 3648 0 0 Y 25 4746 * * * 5162 * 1516 * 3815 5240 * 4544 * * * * * * * 1169 25 0 * * * * * * 3648 0 0 Y 26 * * * * 2896 * * 2829 * 5355 4746 * * * * * * * * 592 26 0 * * * * * * 3648 0 0 L 27 * 4350 * * * * * * * 380 2455 * * * * * * * * * 27 0 * * * * * * 3648 0 0 A 28 2589 * * 2291 * 4889 5761 * 2360 * 5766 4031 * 3203 3713 4622 3691 * * * 28 0 * * * * * * 3648 0 0 K 29 * * * 3058 * * * 4474 1692 4061 3886 * * 3533 2201 3770 5600 * * * 29 0 * * * * * * 3648 0 0 N 30 1209 * * * * 5379 * * * * * 3138 * * * 1565 * 3443 * * 30 0 * * * * * * 3648 0 0 G 31 * * * * * 0 * * * * * * * * * * * * * * 31 0 * * * * * * 3648 0 0 F 32 5240 * * * 840 * * 4789 * 3242 * * * 4803 * * * 2075 * * 32 112 3744 * 3307 154 * * 3648 1670 0 E 33 3471 5600 2704 2600 * 5355 5991 * 4224 * * 2788 5808 2611 4989 4663 5294 4783 * 5794 33 55 4746 * 1000 1000 * * 3648 1000 0 T 34 4750 2407 * 4989 * 4795 * * * * * 3343 4101 4688 * 2488 1680 5590 * * 34 0 * * * * * * 3648 0 0 S 35 3397 * 5379 3639 * * * * 4789 * * 4418 2989 4519 * 1993 2374 3264 * * 35 26 5808 * 1585 585 * * 3648 1000 0 D 36 * * 112 * * * * * * * * 4789 4688 * * * * * * * 36 0 * * * * * * 3648 0 0 I 37 3728 * * 3221 * * * 4708 3298 4889 4803 * 1875 3704 5294 4190 * 2488 * * 37 0 * * * * * * 3648 0 0 K 38 * * * * * * 4688 * 3693 * * 4789 * 3877 573 3219 * * * * 38 0 * * * * * * 3648 0 0 I 39 * * * * * * * 2143 * 1766 5566 * * * * * 3815 1368 * * 39 38 5278 * 4907 49 * * 3648 1000 0 K 40 2862 * * * * * * 3575 1839 4878 * * * * * * 1911 2966 * 3815 40 0 * * * * * * 3648 0 0 R 41 * * * * * * * * 2275 * * * * 4803 497 4350 * * * * 41 0 * * * * * * 3648 0 0 I 42 3432 * * * * * * 5694 * 563 2511 * * * * * * 4803 * * 42 0 * * * * * * 3648 0 0 L 43 * * * * 5043 * * 1347 * 1923 * * * * * * * 1676 * * 43 0 * * * * * * 3648 0 0 A 44 1888 * * * * 3163 * * * * * * * * * 694 * * * * 44 0 * * * * * * 3648 0 0 L 45 * * * * * * * * * 350 3815 * * * * * * 2793 * * 45 0 * * * * * * 3648 0 0 A 46 666 * * * * * * * * 3219 4789 * * * * 3661 4622 3234 * * 46 0 * * * * * * 3648 0 0 T 47 1237 * * * * 4746 * * * * * * * * * 3715 1113 * * * 47 0 * * * * * * 3648 0 0 Q 48 * * 3815 2999 * * 2895 * * * * * * 579 * * * * * * 48 0 * * * * * * 3648 0 0 K 49 * * * * * * * * 142 * * * * 4989 4005 * * * * * 49 0 * * * * * * 3648 0 0 F 50 * * * * 133 * 4795 * * 5162 * * * * * * * * * 5379 50 0 * * * * * * 3648 0 0 I 51 * * * * * * * 1505 * 1955 3494 * * * * * 5043 1885 * * 51 0 * * * * * * 3648 0 0 S 52 2273 * 3815 * 4519 * * * * 5162 * * * 4989 5240 1050 3188 * * * 52 0 * * * * * * 3648 0 0 D 53 * * 550 2339 * * * * * * * * * 4267 * 4989 4803 * * * 53 0 * * * * * * 3648 0 0 I 54 * * * * * * * 829 * 4486 * * * * * * 4629 1506 * * 54 0 * * * * * * 3648 0 0 A 55 902 4878 * * * * * 2286 * 3034 * * * * * 5278 5162 4324 * * 55 0 * * * * * * 3648 0 0 Q 56 3689 * 3609 * * 5766 4431 * 4190 2806 * 2403 * 3664 3740 2945 3856 4783 * * 56 0 * * * * * * 3648 0 0 D 57 * * 371 4878 * * * * * * * 3553 * 3815 * 4783 * * * * 57 0 * * * * * * 3648 0 0 A 58 403 4350 * * * * * 3815 * * * * * * * 3019 * * * * 58 0 * * * * * * 3648 0 0 Y 59 * * * * 3037 * 3251 * * 2516 2267 * * 4519 5294 4350 * * * 1876 59 0 * * * * * * 3648 0 0 E 60 4519 * 4350 3692 * 4878 5278 5294 * 4746 * 4629 * 803 4109 * 4795 * * * 60 0 * * * * * * 3648 0 0 Y 61 * 3583 * * 2786 * 1887 * * * * * * 5043 * 3223 * * * 1459 61 93 4001 * 2650 250 * * 3648 1454 0 S 62 1829 2436 * * * * 3207 * * * * 4629 * 5162 3815 2285 4519 * 4746 * 62 0 * * * * * * 3648 0 0 R 63 4884 * * * * * 4506 * 1488 * * * * * 1194 * * 4121 * 3814 63 0 * * * * * * 3638 0 0 I 64 2852 * 6635 * * * 4672 1653 * 3227 2688 * * 3592 4884 * 4496 3814 * * 64 275 2526 * 4128 85 * * 3638 2120 0 R 65 * * * * * * 4506 * 2301 * * * * 3814 552 * * * * * 65 50 4885 * 4737 55 * * 3638 1420 0 S 66 2603 * * * 3198 2854 4997 * * * 3373 5256 6019 5340 4794 2529 2819 4541 * * 66 376 2125 * 4348 73 * * 3638 2481 0 S 67 1994 * 3814 * * 4683 4506 * * * * 3838 2315 3888 * 2771 3184 * * * 67 176 3123 * 5107 42 * * 3638 1997 0 S 68 3067 * 5496 * * 3301 * * 1165 * * * * 4261 * 2629 3363 * * * 68 91 4039 * 4430 69 * * 3623 1420 0 S 69 3471 * 1847 2405 * 4320 * * 5590 * * * 5795 2283 3183 4696 * * * * 69 182 3075 * 3582 126 * * 3623 1955 0 N 70 * * 4641 * * 3655 * 4402 2098 * * 2966 5447 4820 2522 3002 3127 * * * 70 194 2992 * 3318 152 * * 3623 2184 0 K 71 * * * * * * * * 863 * * 4641 * * 1286 * * * * * 71 0 * * * * * * 3623 0 0 V 72 4912 * * * 5341 * * 3272 3852 2897 * * 3613 * 3666 5204 2797 3279 * 2318 72 0 * * * * * * 3623 0 0 V 73 * * 3103 * * * * 4298 * * * * * * * * 1667 950 * * 73 104 3852 * 3322 152 * * 3623 1000 0 L 74 * * * * 4860 * * * * 187 4641 * * * * * 4402 * * * 74 0 * * * * * * 3623 0 0 T 75 3619 * * 4118 * 4641 * * * 3852 5590 * * 3078 4691 * 801 * * * 75 0 * * * * * * 3623 0 0 M 76 * * * 4061 4407 * * * * 3886 1065 5033 * * * 5041 2553 3108 * * 76 70 4402 * 1000 1000 * * 3623 1000 0 D 77 * * 2491 743 * 5790 * * * * * 5732 * * * 4407 * 3811 * 3852 77 0 * * * * * * 3623 0 0 D 78 * * 99 * * * * * * 3908 * * * * * * * * * * 78 0 * * * * * * 3623 0 0 L 79 * * * * * * * * * 70 * * * * * * * 4402 * * 79 0 * * * * * * 3623 0 0 R 80 2287 * 4787 3299 * 3643 * 3287 4407 * 5400 * * 5341 5762 1937 5773 4442 * 4820 80 0 * * * * * * 3623 0 0 S 81 1909 * * 4787 4641 * 4820 * 2929 5377 4111 3527 2703 4407 * 3043 * * * * 81 0 * * * * * * 3623 0 0 A 82 380 * * * * * * 4787 * * * * * 3852 * 3384 * 5041 * * 82 0 * * * * * * 3623 0 0 L 83 * * * * * * * * * 174 * * * * * 5741 * 3400 * * 83 57 4691 * 0 * * * 3623 1000 0 G 84 2226 * * 3811 * 3272 * * 2037 * * 3403 * 4140 3168 3249 * * * * 84 22 6036 * 0 * * * 3623 1000 0 E 85 4641 * 1900 797 * * * * 4407 * * * * 3852 * * * * * * 85 0 * * * * * * 3623 0 0 Y 86 * * * * * * 2901 * * * 4764 * * 4641 2970 * * 4860 * 673 86 0 * * * * * * 3623 0 0 G 87 * * * * * 0 * * * * * * * * * * * * * * 87 0 * * * * * * 3623 0 0 I 88 * * * * * * 4787 945 * 2752 5837 * * * * * * 1845 * * 88 0 * * * * * * 3623 0 0 N 89 * * 3528 5041 * * 3331 * * * * 758 * 4787 * 3484 3905 * * * 89 0 * * * * * * 3623 0 0 V 90 5425 * * * * * * 1532 * 2355 5529 4780 * * * 5574 5822 1562 * * 90 0 * * * * * * 3627 0 0 K 91 3758 3363 * * * 5718 4100 * 1635 * * 4395 * 4802 2308 3212 4780 * * * 91 0 * * * * * * 3627 0 0 R 92 5354 * * 3845 * * 4352 * 1562 * * 4676 * * 1061 * * * * * 92 0 * * * * * * 3627 0 0 P 93 5425 * * * * 4623 * * * * * * 182 6436 * 5761 * 5325 * * 93 0 * * * * * * 3627 0 0 N 94 3876 * 2131 1802 * * 3726 * * * * 5692 2107 4314 * * * * * 4663 94 0 * * * * * * 3430 0 0 F 95 * * * * 1669 * * * * * * * * * * * 5365 * * 597 95 0 * * * * * * 3430 0 0 Y 96 * * * * 1551 * 4314 * * * * * * * * * * * * 717 96 0 * * 0 * * * 3174 0 0 //