HHsearch 1.5 NAME c6spdU_ FAM FILE c6spdU_ COM /bmm/www/servers/phyre2/HH/hhmake -i c6spdU_.a3m DATE Sat Oct 19 08:25:35 2019 LENG 103 match states, 103 columns in multiple alignment FILT 113 out of 191 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.9 EVD 0.4109 -1.0815 SEQ >ss_dssp CCSCCSSCCEEECSSSSTTCBCCEEEECSSSEEEETTSSEEEEECCCCTTTCCCCSEEEEECCEETTTEEEECSSSCSEECEEEEEESSSEEEEETTTCC BCC >sa_dssp DDDBDEEBDABBDEDECEEDDBDADEDDEEDDACACEBCDDEEECEDDEEEDECDDEEDECCCBDDECBCBCAEDDEDCBEBBCEDEEEDDDBBBDEDDD DBE >ss_pred CCCCCCCCEEEEEECCCCCCEEEEEEEECCCEEEEECCCEEEEEECCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCEEEEEEEEECCEEEEEEECCCC EEC >ss_conf 9600448799999658888526899990588399956737775654777767776478963143310078671456752078999989969999902566 809 >Consensus mxkIkkGDxVxVisGkdKGKxGxVxxVxxxxxViVegvNxxkkhxkpxxxxxxxGgixxxExPIhiSnVxLvdpxxxkxtrvxxxxxdgxkvRvxkktgx xIx >c6spdU_ MQKIRRDDEVIVIAGKDKGKRGKVLKVLADDRLVVGGVNLIKRHTKPNPMLGQQGGIVEKEAPLHVSNVAIFNTETSKADRVGFKVEDGKKIRVFKSTQK PVQ >UniRef50_Q0SN18(4-101:101) 50S ribosomal protein L24 n=20 Tax=Borrelia RepID=RL24_BORAP E=7e-13 s/c=0.77 id=32% cov=95% --KLKIGDSVKILSGKDKGRIGKIASINRkKNKVIVESCNMVKKVIKAR-TPQEKGKIIDKEAAIDISNVMIF--VKGTSSRLGIRFENNEKIRYLKKNG QRI- >UniRef50_Q0UTG7(144-225:519) Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum RepID=Q0UTG7_PHANO E=1e-06 s/c=0.66 id=25% cov=78% -----KDDRVVVIKGREKGKIGVIQSVNDRTHgVFLTGLNMHYYDADVFGLSGDGGGAKRAnEVPIPIEDLRLVVPYEMTEKRVVY-------------- ----- >UniRef50_C3ZA12(65-165:230) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3ZA12_BRAFL E=2e-23 s/c=1.09 id=32% cov=97% ---VKKGDIVQILRGRDEGKQGKVVQIIRErNWVVVEGLNCHYRYIGKNPAKDFPGQMVRSEAPLMYREVALIDPSDNEPAEVEWRfTEDGEKVRVSTRT RRII- >UniRef50_B6KSY0(262-358:438) 50S ribosomal protein L24, putative n=3 Tax=Toxoplasma gondii RepID=B6KSY0_TOXGO E=2e-21 s/c=1.06 id=34% cov=92% --KIRPGDKVVVISGKFKTIRGTVLQIDKmRNGVSVSGVKEQKR------VKQEDGSFIRIPGLIHVSNVMLIDQAIDLPTRVALRVDDrGNVVRISKKS GLVI- >UniRef50_P10141(4-105:108) 50S ribosomal protein L24 n=8 Tax=Bacteria RepID=RL24_MYCCT E=1e-13 s/c=0.76 id=34% cov=98% --RILKGDVVKVIAGSHKGQIGPITSITKDKQWVSVQGITVKKHVKPTNE-DSEGGIKDIPAKLHISNVALQDPKNKdQVTKVGFEIIDGKKVRIARKSK TQIK >UniRef50_Q4Q9S7(139-225:476) Putative uncharacterized protein n=6 Tax=Trypanosomatidae RepID=Q4Q9S7_LEIMA E=4e-08 s/c=0.68 id=22% cov=85% ------GDTVEVVSGEGAGQRGAIIAVVKYKNEILVQNVNVQDVVIPASETRPE-QVVQREHPISVLRVRHVDPSTNQLCHLEIV-----KVR-NKETGE --- >UniRef50_Q6CGC1(60-148:301) YALI0A20526p n=1 Tax=Yarrowia lipolytica RepID=Q6CGC1_YARLI E=4e-07 s/c=0.63 id=27% cov=77% ------GDKVQILAGPDKGKVSQIMARHEEgNSYLVDGVNGTQTFPIPpaMAQEGQTTHVIEFPNPLKQSELRLVAQrpeEDGTTTEVAI---------- --------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * 4017 * * 92 * * * * * * * * * 1 0 * * * * * * 3532 0 0 Q 2 3195 * * * * 4647 * 3574 2057 4695 * 4769 * 2587 4909 5046 * * 4402 2522 2 0 * * * * * * 3687 0 0 K 3 * * * 5715 * * 2318 * 909 * * 4740 * * 2248 * * * * * 3 0 * * * * * * 4324 0 0 I 4 * * * * 4909 * * 623 * 2732 * * * * * * * 2713 * 6095 4 0 * * * * * * 4654 0 0 R 5 5485 5514 * * 4175 * 5505 5525 1140 4899 * * * 5746 2158 * 6320 3302 * 6308 5 0 * * * * * * 4670 0 0 R 6 4752 * * * * * * 5750 969 * * * 6192 5478 2556 4293 3159 3959 * * 6 0 * * * * * * 4843 0 0 D 7 * * 3604 5906 * 410 * * 5752 * * 2947 * * * * * * * * 7 0 * * * * * * 5015 0 0 D 8 5816 * 67 5780 * * * * * * * * * 6770 * * * * * * 8 0 * * * * * * 5015 0 0 E 9 * * 6695 3968 * * * 4986 2442 2788 4831 4717 7293 4104 2754 5073 2135 5455 * * 9 0 * * * * * * 5015 0 0 V 10 * * * * * * * 4952 * * * * * * * * * 47 * * 10 0 * * * * * * 5015 0 0 I 11 5718 5404 * 2876 6466 * * 3174 2635 3956 4487 * * 2180 5007 * * 2720 * 5296 11 0 * * * * * * 5015 0 0 V 12 6490 * * * * * * 1832 * 4936 7670 * * * * * * 577 * * 12 0 * * * * * * 5015 0 0 I 13 * 5742 * * * * * 923 * 1948 4251 * * * 6296 * 4329 3646 * * 13 0 * * * * * * 5015 0 0 A 14 1977 5121 * 6112 * 6440 5982 6174 4155 * * * * 5171 3850 1636 2926 4186 * * 14 47 4951 * 557 1643 * * 5057 1624 0 G 15 * * * * * 24 5921 * * * * * * * * * * * * * 15 0 * * * * * * 5057 0 0 K 16 3802 * 4544 4068 * * * * 1241 * * 3544 2940 5982 3338 3961 * 7029 * * 16 36 5347 * 3004 192 * * 5057 1923 0 D 17 5646 * 696 3025 4415 5228 4632 * 7273 * * 4409 * 7164 * 5461 * * * 4543 17 19 6233 * 2130 374 * * 5057 1383 0 K 18 3781 * * 4964 5981 * * 6474 473 * * * * * 3371 5972 5732 * * 5921 18 9 7363 * 1000 1000 * * 5057 1000 0 G 19 * * * * 6639 126 * * 5901 * * 5830 * * 5982 6572 6283 * * * 19 40 5191 * 2589 262 * * 5057 1821 0 K 20 6083 * * 4171 * 6835 6019 5394 584 * * 7184 * 3614 3938 7584 5079 5656 * 7363 20 0 * * * * * * 5057 0 0 R 21 * * 7184 3846 6637 * * 2579 4873 7105 6686 * * 2236 2882 3871 2680 3025 * * 21 0 * * * * * * 5057 0 0 G 22 4915 * * * * 197 * * * * * 7139 * * * 3908 5586 * * * 22 0 * * * * * * 5057 0 0 K 23 4247 * 6450 3033 * * * 3318 1632 5244 * * 6038 4798 4234 * 3021 3045 * 5981 23 0 * * * * * * 5057 0 0 V 24 * * * * * * * 1785 * * * * * * * * * 495 * * 24 16 * 6482 * * * * 5057 0 0 L 25 6804 * * 5945 * 6064 * 2423 3451 1370 5292 4871 * 5559 4388 3769 4339 4522 * * 25 0 * * * * 0 * 5048 0 1000 K 26 2826 * * 3475 7091 * 6067 * 2084 * 7106 5899 * 2984 2624 2779 6560 * * 4574 26 0 * * * * * * 5057 0 0 V 27 6179 5748 * * 6643 * * 1951 * 5021 * * * * 5417 5082 5239 764 * * 27 42 5908 6341 0 * * * 5057 1575 0 L 28 5727 6466 2654 5341 3296 * 5923 2736 * 2140 6185 3416 * * 7329 5264 6024 3420 * 4554 28 106 3977 7134 791 1244 0 * 5064 2789 1384 A 29 4800 * 5560 5051 * 7144 5368 * 1877 * * 6279 2264 4559 2141 4411 4600 6510 * 5659 29 286 2476 * 0 * 0 * 5062 3378 1000 D 30 * * 2931 1955 * 5340 * 5555 1624 * * 4470 * 4369 3844 4664 * 6643 * 5168 30 449 1904 * 0 * * * 5057 4264 0 D 31 6782 * 2925 3783 * 4052 6018 * 3132 * * 1559 * 4635 4265 3971 3434 6805 * * 31 229 2768 * 636 1488 * * 5057 3353 0 R 32 7138 * 6858 4381 * 5195 4563 * 2632 7153 6400 3773 * 3546 1648 3795 4388 6647 4053 5747 32 234 2741 * 609 1538 * * 5057 3730 0 L 33 3032 * * 5687 * * * 4109 * 3455 * * * * 6615 * 7139 621 5311 5932 33 0 * * * * * * 5057 0 0 V 34 5899 5981 * 6795 5158 * * 1434 4570 2432 * * * 5850 5595 6283 4728 2419 * 4125 34 94 3992 * 705 1371 * * 5057 2351 0 V 35 * 6496 * * * * * 3960 * 4051 * * * * * 6038 * 236 * * 35 14 * 6647 * * * * 5057 0 0 G 36 5087 * 3531 1147 * 4999 * * 2749 * * * * 4353 4583 4146 4622 3950 * * 36 0 * * * * 0 * 5047 0 1000 G 37 7274 * 3734 5626 * 553 6687 * 4017 * * 3303 * 4852 * 6817 * * * * 37 20 * 6174 * * * * 5057 0 0 V 38 5948 4151 * * * 5302 * 2421 6180 2016 * 5686 * * 6401 * 7472 1260 * * 38 16 * 6487 * * * 0 4993 0 1000 N 39 5663 * * * * 5318 7137 6037 4373 6451 5706 321 * 7164 5925 * * 5062 * * 39 41 * 5153 * * * 0 4981 0 1425 L 40 * 3651 * 5328 7071 5835 * 2715 4507 2752 2126 5031 * 7320 4417 * 4823 2689 * 5467 40 26 * 5786 * * 1506 626 4954 0 2289 I 41 4958 6555 * 5173 * 6932 3966 3056 3372 6334 * * * 4696 2614 5137 5333 1423 * * 41 36 6909 5916 1585 585 1922 442 4975 1000 2226 K 42 * * * * * * 6893 3840 1262 6373 * 6445 5864 4150 3388 6309 2307 4819 6945 4210 42 18 * 6350 * * 2063 395 4946 0 2273 R 43 * * 4745 6580 5915 5694 6205 * 1063 6354 * * 5937 5633 1869 6614 3870 * * 5436 43 30 * 5606 * * 385 2096 4961 0 2248 H 44 4413 * 5545 6006 3564 * 776 * 5490 6358 * 5017 6929 * 6373 4850 4843 5116 * 3977 44 0 * * * * 1427 671 5030 0 1923 T 45 4961 * 5233 6191 5249 * 4717 2821 4419 5279 4380 6656 5917 3694 5281 4859 2965 1769 5986 * 45 68 * 4431 * * * 0 5023 0 1560 K 46 * * 5491 * * 6330 * 3809 726 * 7094 5893 5639 6912 2191 * * 5813 * * 46 120 5292 4211 1615 570 2378 308 4985 1754 2690 P 47 3152 * 4971 4837 * 4778 * * 3326 6308 5790 6265 1038 4964 4130 5454 * 4575 * * 47 201 5384 3240 1246 790 1250 787 4961 1620 3328 N 48 4028 * 4200 6024 4525 3730 * 4484 3538 6338 5208 2704 6357 * 5052 3581 1931 6239 * 5324 48 336 6546 2345 0 * 289 2463 4986 1000 3542 P 49 4317 6244 5041 4248 * 3395 5897 * 4171 5828 * 3392 2402 3063 * 2122 5764 * 5932 * 49 131 5475 3955 1000 1000 344 2238 5031 1470 3571 M 50 3148 * 6010 2681 6076 6598 * 6364 4561 4941 5564 5671 7165 1715 3237 4867 3885 5578 * 5489 50 179 * 3102 * * 1253 785 5066 0 3007 L 51 4505 * 5046 3004 5698 2874 * 6017 2330 5040 6793 5581 5637 4725 3391 3247 3236 * * 7384 51 170 6209 3359 2000 415 576 1602 5039 1000 3409 G 52 4527 * 3023 4377 * 2179 5952 * 3850 * * 1707 6272 4328 4744 5062 5294 5846 * * 52 22 * 6031 * * 1008 992 5070 0 3513 Q 53 * * 4480 2486 4950 * 4946 4414 5140 5752 6090 5095 1957 2740 3645 4835 5177 7024 * 5900 53 66 * 4479 * * 288 2466 5076 0 3120 Q 54 4590 * 3931 2676 * 5103 5196 6525 2940 5389 6511 6039 4015 2464 6255 2935 3648 5497 * * 54 88 * 4072 * * 1039 962 5042 0 2661 G 55 5622 * * * 6178 315 * * * 6352 * 6334 4925 * * 4505 4576 5738 * * 55 16 6521 * 0 * 1038 963 4860 1000 3114 G 56 5515 * 5750 4969 6242 948 5866 5906 4302 6072 4400 6630 5772 3569 4549 4184 4982 * * 7100 56 0 * * * * 712 1360 4963 0 2115 I 57 4725 * * * 4225 * * 1086 5291 2790 6426 * * * 4530 4888 4406 3359 * 4868 57 12 * 6870 * * * 0 5047 0 1110 V 58 6643 * 4714 3508 4979 * 6881 2039 3647 3778 7105 * * 5277 6085 5633 5307 1696 * 5271 58 0 * * * * 1139 873 5042 0 1655 E 59 5202 * 3867 2220 * * 5680 5785 2724 5152 4661 5523 * 3109 3938 3530 3152 5715 * 6378 59 31 5569 * 1397 689 * 0 5047 1595 1110 K 60 5554 * * * 3940 * * 2429 2005 5636 4450 * * 3085 2833 4013 4546 4325 * * 60 57 4685 * 1475 643 0 * 5047 1531 1110 E 61 6777 * * 322 * * 6323 * * * * 5281 3003 * * 5794 6632 * * * 61 0 * * * * * * 5056 0 0 A 62 1330 * 5481 5763 4254 3628 5716 6110 3690 5174 4402 5346 * 5335 3996 4502 6815 4080 * 5794 62 0 * * * * * * 5056 0 0 P 63 4487 * * * 5858 4971 * * 5232 6310 * * 386 * * 3601 5681 * * * 63 0 * * * * * * 5056 0 0 L 64 * 5848 * * 6535 * * 772 * 1868 4113 * * * * * * 4194 * * 64 20 6177 * 1000 1000 * * 5056 1000 0 H 65 3778 6397 4175 6497 5954 * 904 * 5965 4767 6469 3734 3803 6960 5296 4423 * * * 7108 65 0 * * * * * * 5056 0 0 V 66 3384 5870 * * 5763 * 6497 1613 6177 3509 6777 * * 5965 5235 4844 * 2061 * 3282 66 80 4205 * 0 * * * 5056 1784 0 S 67 5114 6098 * 5605 * 6177 6497 * * 5716 * * * * 6469 258 5272 * * 5763 67 0 * * * * * * 5056 0 0 N 68 6117 * 4736 3529 * * * * 2940 * * 675 * 4374 5716 5643 5848 * * * 68 38 5248 * 514 1739 * * 5056 1557 0 V 69 * * * * * * * 3609 * 2625 * * * * * * * 404 * * 69 0 * * * * * * 5056 0 0 A 70 1732 * * * * * * * 3371 4763 1921 5008 5826 3842 3306 4701 5383 5682 * * 70 36 6285 6394 0 * * * 5104 1000 0 I 71 * * * * 5639 * 4595 3449 * 571 * * 5000 * * * * 3370 * 4442 71 25 6673 7123 0 * 0 * 5120 1000 1000 F 72 5155 7018 * 6852 3350 6656 7143 2868 6661 2909 7060 * * 6065 * * * 1133 5162 4203 72 118 4597 4760 2078 390 * 0 5144 2073 1000 N 73 4806 2530 848 5833 6693 5665 * * 6702 6217 * 3612 * * * 4214 * 5059 * * 73 45 * 5022 * * 927 1077 4973 0 2404 T 74 4395 * 6551 4058 * 5202 * * 3614 * 7192 5401 850 3855 * 3563 5492 6415 * * 74 38 5248 * 3107 178 0 * 4978 1633 2466 E 75 3389 * 4963 3000 6295 5267 5215 7291 1735 * 6951 5592 6739 5104 6712 2418 5313 3906 * 5703 75 45 5013 * 1667 546 * * 4979 1810 0 T 76 4022 2762 2876 4363 * 5184 * 5506 3714 4581 * 3533 * 6448 * 5307 1851 5150 * 6615 76 10 * 7117 * * * * 4979 0 0 S 77 * * 4627 3717 6727 1323 5604 * 2852 5361 5698 2733 6781 5378 * 3958 5391 * * * 77 86 4359 6727 1766 502 * 0 4984 2291 1000 K 78 5389 * 7522 3086 5239 * 6569 4390 1281 4153 * * * 3832 3533 6881 3610 4226 * * 78 12 6916 * 2322 322 0 * 4974 1000 1546 A 79 2663 * * 5698 * 3012 6691 5599 * 5775 * 6282 1327 5548 4471 3844 4220 4352 * * 79 14 6731 * 4170 82 * * 4974 1000 0 D 80 4541 3198 4483 6291 * * * 7171 3893 * 6457 * * * 6569 2983 1039 3622 * * 80 21 6095 * 0 * * * 4974 1000 0 R 81 6564 * 4084 4285 6356 * 5775 5219 1768 * * * * 6095 1004 * 6064 * * * 81 0 * * * * * * 4974 0 0 V 82 4166 5451 * * 6123 6537 * 2304 * 3823 * * * * * 6390 3827 887 * * 82 29 6578 6775 0 * * * 4967 1000 0 G 83 3320 * * 3275 * 1245 6332 5301 2954 * * * * 6551 3945 4509 5428 3943 * * 83 0 * * * * 0 * 4965 0 1000 F 84 * * * * 2504 * 4382 2752 5108 4119 6578 * * * 2968 6121 5392 3496 2987 2742 84 57 4689 * 603 1550 * * 4967 2183 0 K 85 5103 * * 4846 4698 6651 * 4464 1609 6859 * 7213 * 4768 1567 4670 5799 3887 * * 85 334 2420 5654 55 4729 * * 4837 3454 0 V 86 5898 * * 5799 3971 * * 2754 4667 2068 5630 * * 6754 6017 6260 2436 2950 6001 3513 86 291 2451 * 723 1343 * 0 4693 3692 1000 E 87 3996 * 2757 1312 * 5510 6746 4412 3052 6885 5874 4264 * 5155 6986 6745 6139 4302 * * 87 131 3530 * 1385 696 * 0 4694 2837 1000 D 88 6223 * 1228 2385 * 3263 * * 5892 6746 * 2816 * * * 4504 4271 * * * 88 91 4038 * 676 1419 * 0 4694 2498 1000 G 89 * * 4544 5601 * 474 * * 3644 * * 3423 * * * 5564 6716 6307 * * 89 60 4629 * 2323 322 * 0 4699 2156 1000 K 90 4715 6830 5807 2675 6254 5614 * 6110 1324 * * 3492 * 6248 3725 4888 3061 * * * 90 66 4480 * 1920 443 0 * 4699 2180 1000 K 91 * 5861 * * * 6684 6080 * 521 5002 * * 5561 5505 3072 6542 * 6060 6071 5198 91 9 7279 * 3000 193 * * 4752 1000 0 I 92 5157 * * 4221 * * * 3342 4135 4325 * * * 4763 * 5522 4010 780 * 6646 92 21 6147 * 0 * * * 4752 1000 0 R 93 * * * * * * * * * * * * * 5630 29 * * * * * 93 30 * 5595 * * * * 4752 0 0 V 94 * * * * 3522 * * 2012 6588 4710 5517 6021 * * 4728 * 5075 1336 * 3112 94 0 * * * * 0 * 4691 0 1000 F 95 2504 2230 * * 3298 5690 * * * 4128 5294 4800 * 6224 * 1583 6512 6278 * * 95 0 * * * * * * 4744 0 0 K 96 * 6686 * 5909 * * * 5684 597 5167 * * * * 2819 5874 4194 4269 * * 96 0 * * * * * * 4721 0 0 S 97 5193 * 5667 4296 * 5360 * 5297 1239 5040 * 6137 6334 5127 2236 3250 5963 6683 * * 97 23 5961 * 0 * * * 4710 1000 0 T 98 5818 2747 6224 6303 * * * * 5973 * * 5387 * * * 1528 1305 5956 * * 98 0 * * * * * * 4692 0 0 Q 99 5454 * 4120 * * 601 * * 3694 * * 2741 * 5880 5920 * * * * * 99 0 * * * * * * 4680 0 0 K 100 3856 * 6964 1778 5826 * 4287 * 2041 5827 * 4731 * 4457 4734 3895 3556 * * 5122 100 0 * * * * * * 4686 0 0 P 101 5356 * 4592 2573 5265 * * 2662 6402 4155 * 6315 4807 4675 6005 3745 3850 1905 * * 101 0 * * * * * * 4501 0 0 V 102 * * * * 6037 * * 478 * 2272 6474 * * * * * * 4370 * * 102 0 * * * * * * 4499 0 0 Q 103 * * * 2090 * * * * 1432 * * * * 1342 * * * * * * 103 0 * * 0 * * * 3133 0 0 //