HHsearch 1.5 NAME c6spbR_ FAM FILE c6spbR_ COM /bmm/www/servers/phyre2/HH/hhmake -i c6spbR_.a3m DATE Sat Oct 19 08:26:44 2019 LENG 102 match states, 102 columns in multiple alignment FILT 102 out of 228 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.7 EVD 0.4209 -0.8042 SEQ >ss_dssp CEEEEECSSSEEEEETTCEEEEECCSCCTTCEEEECCEEEEEETTEEEECSSSCTTCCEEEEEEEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEEEEE EC >sa_dssp DDACACCCEDECEBDCECECDBDDCECDEEDEBEBEDACCBAEEEEDDECDECBEEBDACADBDCCCDDEDEECEDEEEEEEDDEEEDDDDDBACACADC CC >ss_pred CEEEEEECCEEEEECCCCEEEEECCCCCCCCEEEEEEEEEEECCCEEEEECCEECCCEEEEEEEEECCCCCEEEEEECCCCCCEEECCCCCCCEEEEEEE EC >ss_conf 9899998988769726998993034778888799616899945980599041746819999999733478299999438888814115146512999957 69 >Consensus MyAIvxxgGkQyxVxxGdxixvxxlxxxxGdxixlxxVLxxxxxxxxxiGxPxvxxaxVxaxVxxxxkxxKvxvxKxkrrKxxxrxxGhRqxxTxirIxx Ie >c6spbR_ MYAVIVTGGKQHKVTEGEFLKVEKLDVATGEAIDFDRVLLVANGEDVKIGLPVVEGAKVTAEVVSHGRHDKVRIIKFRRRKHHMKRQGHRQWFTEIKITG IQ >UniRef50_B5Y5I6(109-214:236) 50S ribosomal protein L21 n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B5Y5I6_PHATR E=0.0001 s/c=0.45 id=29% cov=101% LFAILELAGSQHKITTDDLLIVNRLRPQkhfhVGSVHTLEDVMLVSSSHYTLVGMPYVRGAQVDLLVEEITMDAKVIVFRKRRRKNSQRKNGSRRDVTML RVLDIR >UniRef50_Q8ILN1(209-299:380) Mitochondrial ribosomal protein L21, putative n=7 Tax=Plasmodium RepID=Q8ILN1_PLAF7 E=3e-08 s/c=0.65 id=24% cov=89% -----------HKVVIGDIVQTERLHrKKAGDVIYFGTILFVGSPNFSIIGKPTIPYCKVKAVIEQITLSKEILSFRYKKVRRSSRFLRIKHWITILKIQ DI- >UniRef50_Q5SD00(4-109:121) 50S ribosomal protein L21, chloroplastic n=6 Tax=Streptophyta RepID=RK21_HUPLU E=6e-21 s/c=0.95 id=29% cov=99% -YAVIETGGEQLRVEPGRFYDVRHFaslnpeNLGPNSKILIYRVLMICDESTINIGHPWLKGAMIKGRILHSRLDNKITVYRMRSKKKTRRKLGHRQKLI RFVVDSI- >UniRef50_B6KKC8(51-151:191) Ribosomal protein L21, putative n=3 Tax=Toxoplasma gondii RepID=B6KKC8_TOXGO E=1e-20 s/c=0.99 id=29% cov=99% -FFVAHIGGTQFIMEKGRFYDMNRIYQRVGGRIHLHRIICYQTpDGEFWLGRPYLENVRVTATVEKHFRGPKMYMAKARPKK-WRKYFSHRQDLTRIRIN EVE >UniRef50_A8Q8Q2(48-152:158) 50S ribosomal protein L21, mitochondrial n=1 Tax=Brugia malayi RepID=A8Q8Q2_BRUMA E=4e-13 s/c=0.72 id=17% cov=101% LFAVVYINKRQFKVSENDLIALyDNVPLDVGDKIKLEKILAIGGKNFTLFGRPLIHSpiVTVNATVVEKTTSYPQLRYMMNNHTKARTLHWMSRETTILR INNIK >UniRef50_B9WKG5(49-154:156) Mitochondrial ribosomal protein, large subunit, putative n=9 Tax=Saccharomycetales RepID=B9WKG5_CANDC E=2e-11 s/c=0.66 id=16% cov=101% LYAIFRLHNLPYLVTKGDKVYLPyKLkNASVGDVLNLNDVVTLGSPQYTLNMKEGISSELFdlKASVVEITKEPRYQVVRKKQRCRTTKTSQVEPFQTVL MINELK >UniRef50_B6HGU6(126-230:258) Pc20g06490 protein n=5 Tax=Eurotiomycetidae RepID=B6HGU6_PENCW E=3e-14 s/c=0.76 id=19% cov=100% -YVVAQLHARPYLLTEGDHIRLPFLmpKVKAGDILRFNRASALGSRDFTMKGSPTIDERIYECrvRVTGVDSEPLRIKEKTKRRQRHVKQAKSKHRYTLM RVMDVR >UniRef50_C7LYB1(1-99:111) 50S ribosomal protein L21 n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LYB1_ACIFD E=9e-16 s/c=0.86 id=29% cov=98% MDAIISTGGRQERVREGDEVLLD-LQSFEGSSARLTP-LAIIDGDEVLVAPAQLEGAYVEVDIVGVAKGPKVRGFTYKAKANERRRYGHRQRYVRVRVTS V- >UniRef50_C7LKB3(1-103:106) 50S ribosomal protein L21 n=1 Tax=Candidatus Sulcia muelleri SMDSEM RepID=C7LKB3_SULMS E=2e-05 s/c=0.49 id=28% cov=101% MEAYFEILGFQFKATLNSLITIPYLKKEkEGNEIIINNIIYLNEKGKILMGFPYIKKIKLKAKIINHYKGKKLIIFKKKRRKGFKLKKGHRQLLTTIKII GFE # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * 3347 * 2197 549 * * * * * * * * * 1 0 * * * * * * 5296 0 0 Y 2 * * 6029 5198 1828 * 5755 * 5704 6414 * 6333 * 5984 * * * * 6362 771 2 0 * * * * * * 5648 0 0 A 3 242 5235 * * 5934 5539 * 6176 * * * * * * * 6888 6190 4208 * * 3 0 * * * * * * 5656 0 0 V 4 * * * * * * * 1083 5466 4313 * * * * * * 4777 1303 * 6227 4 0 * * * * * * 5656 0 0 I 5 3875 * * * 3087 * * 1602 * 4577 6006 * * * * * * 1227 * * 5 0 * * * * * * 5656 0 0 V 6 5422 * 5473 1641 * * 3342 * 2566 * 6381 6113 * 3503 3546 3979 5590 4710 * 4526 6 0 * * * * * * 5656 0 0 T 7 3902 5755 4521 * 4878 6474 * 1810 * 3187 5466 5656 * 5391 * 4412 2113 3731 * 6483 7 0 * * * * * * 5656 0 0 G 8 3765 4724 * * * 982 3128 * 5687 4788 * 3529 * 5713 4805 3814 * * * * 8 23 6006 * 0 * * * 5656 1000 0 G 9 5012 * 6045 * * 505 * * 5770 * * 3505 * * * 2806 * * * * 9 0 * * * * * * 5656 0 0 K 10 * * * 6237 4250 6566 4704 6635 1135 5718 * 5483 * 4567 2181 5029 4275 5651 * 6216 10 0 * * * * * * 5664 0 0 Q 11 5483 * * * * * * 6514 6511 * 6877 * 3313 264 * * 6158 * * * 11 0 * * * * * * 5664 0 0 H 12 * * * 5501 2728 * 4039 * * 4235 5504 * * 6543 4894 * * 6841 5123 715 12 0 * * * * * * 5678 0 0 K 13 * * * * 5860 * * 4349 1317 2395 * 6380 * 6880 2528 6968 5836 5293 3493 6877 13 0 * * * * * * 5678 0 0 V 14 4009 * * * 5346 * * 4147 * 4187 5939 * * * * * * 348 * * 14 0 * * * * * * 5678 0 0 T 15 3880 * * 1960 6261 * 6591 5247 3414 * 7170 * * 4795 3624 2875 2016 5395 * * 15 0 * * * * * * 5685 0 0 E 16 4390 6261 6025 1704 * * * 6534 2889 4547 * 5544 2420 4500 5614 4611 4270 3995 * * 16 0 * * * * * * 5685 0 0 G 17 * * 3681 5011 * 464 6937 * 5826 * * 3240 * * 5608 6170 * * * * 17 0 * * * * * * 5685 0 0 E 18 6950 * 951 3875 * * 5698 * 3897 * 6974 * * 3096 3179 3798 * * 6265 * 18 0 * * * * * * 5685 0 0 F 19 6921 * 5379 4245 3397 * 5646 3546 4193 2755 * 7057 * 4782 4302 4844 3580 2196 5563 4078 19 0 * * * * * * 5685 0 0 L 20 * * * * 5244 * * 1470 * 2049 5515 * * * * * * 2302 * 2773 20 0 * * * * * * 5700 0 0 K 21 5256 5364 3082 4579 4061 * 5262 4297 3277 3178 * 4261 * 4419 3392 5001 3177 5710 * 3573 21 0 * * * * * * 5700 0 0 V 22 5344 5872 * * 5976 * * 2137 * 2706 4616 * * * * * 3355 1240 * * 22 43 5105 * 826 1198 * * 5700 1732 0 E 23 7232 * 2194 1568 6583 * 4746 * * * * 2963 2149 5420 6277 * * * * * 23 258 2745 6116 496 1781 * * 5700 3835 0 K 24 6504 * * * 4964 6237 4564 * 1622 3689 * 4507 5389 6363 1926 5017 6894 * 6720 3223 24 0 * * * * 0 * 5678 0 1000 L 25 4889 * * * 6277 * * 2631 * 979 4081 * 6717 6068 4603 * 4938 3657 5066 5776 25 255 2628 * 724 1341 * * 5700 4168 0 D 26 3801 * 2882 4278 * 4004 4490 * 2599 6367 * 2789 2549 4690 6561 4018 6867 7464 * 5953 26 167 3335 6626 400 2046 * * 5700 3382 0 V 27 1884 * 6486 6253 5189 2952 5789 5946 3561 3202 * * 4716 4315 * 4250 4836 3111 * 5116 27 87 4096 * 189 3028 * 0 5698 2867 1000 A 28 3139 * 2911 2197 6083 5540 * 6253 2660 * * 3332 6382 3852 5950 4169 4671 4788 * * 28 89 4274 6889 708 1366 0 * 5698 2767 1000 T 29 2770 6266 7091 3105 * * * 4096 4857 4295 * 6060 2623 6069 6695 5293 7349 1559 * * 29 0 * * * * * 0 5703 0 1000 G 30 * * 6228 7111 * 328 * * 4840 * * 3341 6263 6390 5365 * * * * * 30 0 * * * * 0 * 5703 0 1000 E 31 3933 * 1164 3095 * 4052 * * 4947 * * 4728 * 4524 6583 2932 4159 * * * 31 0 * * * * * * 5700 0 0 A 32 4871 6538 5259 2552 6246 * * 3935 2067 6962 * 4690 6867 4189 3925 4359 3428 3016 * * 32 30 5587 * 2031 405 * * 5700 1548 0 I 33 6116 * * 6626 4783 * 5514 1406 6400 2131 7014 * 6510 * * * * 1832 * * 33 19 * 6266 * * * * 5700 0 0 D 34 5485 * 4504 2093 5249 * 5062 3717 4205 4266 * 3539 6880 4609 3212 4940 3640 3586 * 5559 34 0 * * * * * 0 5686 0 1000 F 35 6358 * * * 1985 * * 2684 6607 961 5324 * * * * * * 5027 * * 35 11 * 7052 * * * 0 5686 0 1000 D 36 6044 * 2153 2874 6356 4162 5918 * 3674 6337 * 2578 3651 5290 4583 4550 3850 * * 5518 36 30 * 5610 * * 0 * 5690 0 1594 R 37 4802 6398 2724 3431 * * 5503 * 1887 6172 * 4412 4992 5982 2423 4335 4283 5619 * * 37 56 * 4727 * * 0 * 5688 0 1548 V 38 4083 * * * * * * 2276 5632 4571 * * * * * * * 573 * * 38 0 * * * * 0 * 5659 0 1986 L 39 5895 6993 * * 6672 * 5352 4100 6462 580 4158 6905 * * * 4185 4735 4743 * 6904 39 0 * * * * * * 5700 0 0 L 40 2698 5185 * 5352 3354 6550 * 6905 * 1615 2582 * * 5515 * * 4157 4103 7060 4643 40 0 * * * * * * 5700 0 0 V 41 3932 5462 * * 4163 * * 2619 6510 1979 5732 * * 6068 6890 6962 4886 1686 * 4888 41 27 * 5737 * * * * 5700 0 0 A 42 5743 6267 5369 5372 4665 1345 6525 4641 3119 6440 * 3328 * 5277 5918 3114 6929 4892 * 6647 42 41 6365 5975 1000 1000 0 * 5698 1000 1516 N 43 5922 6569 1766 3723 * 3227 5729 * 4170 * 5865 3789 * 5909 7393 1986 4125 * * * 43 89 5214 4913 0 * 0 * 5708 1597 1505 G 44 5420 * 2865 2885 * 1989 * * 3220 * 6850 3943 4706 * 2746 4869 4910 5943 * * 44 0 * * * * 1358 713 5671 0 1822 E 45 3501 * 1978 2397 * 2662 6550 * 4298 * * 3100 6507 4184 * 5152 5125 * * 6799 45 56 5798 5645 0 * * 0 5691 1574 1363 D 46 5661 7010 4429 2818 2631 4189 5488 * 2948 4071 6648 3679 * 5490 5379 3607 4875 6807 5502 3731 46 13 6850 * 0 * * 0 5688 1000 2215 V 47 5026 * * 6865 4790 6078 * 3250 4036 3897 6678 * 5563 * 6792 3936 1513 2245 6667 * 47 0 * * * * 430 1956 5688 0 2215 K 48 6055 * * 5386 4084 * 5675 3254 3638 1873 5652 4436 * 3975 5706 4881 3409 3326 5911 5004 48 23 * 5976 * * * 0 5695 0 1000 I 49 4409 * * * 3459 * * 1720 5647 3418 6197 4948 * 4334 5314 5099 6485 1873 6513 * 49 26 6697 6875 0 * 1556 599 5698 1000 1878 G 50 4352 * 4237 6361 * 256 * * * * 5736 * * 6048 * * 6112 * * * 50 33 * 5459 * * 1542 607 5709 0 1813 L 51 3264 * 5487 5724 4279 5182 4094 * 2510 5423 5799 4889 4744 3403 2546 3727 3730 * * 6322 51 21 6126 * 3807 107 * 0 5692 1000 2122 P 52 4451 * 6157 5153 * 5415 * * 4547 * * * 261 * * * 6478 * * * 52 28 5694 * 1695 533 1952 431 5692 1670 2122 V 53 4440 * 6820 5609 3266 5162 6403 4246 4761 3150 * 6434 * 6065 * 6092 2885 3809 5272 1713 53 32 5501 * 0 * * 0 5687 1670 1903 V 54 5445 * * * 6403 * * 2232 * 1529 * * * * * * 4275 1497 * * 54 99 3915 * 3648 120 1488 636 5687 2689 1903 E 55 3768 * 2488 2243 * 5194 5812 * 2787 5084 * 4042 3388 5897 4992 3845 4915 6595 * * 55 38 5280 * 1000 1000 1000 1000 5705 1588 1466 G 56 4983 * 4354 4584 6320 1861 5513 * 3518 4629 * 2199 5172 5896 6275 3690 4832 4911 * 5691 56 101 3885 * 1559 598 * 0 5703 2694 1000 A 57 1137 6553 * 5755 5035 4369 * 4323 7208 6383 * 6065 * * 4911 5617 6982 1932 * 5059 57 0 * * * * 0 * 5703 0 1000 K 58 4662 * 6880 4734 6638 6538 * 4341 1912 3772 6277 5515 * 4563 2796 3197 2788 5964 * 6116 58 0 * * * * * * 5700 0 0 V 59 * * * * 4485 * * 2323 * 4850 * * * * * * * 513 * 5657 59 27 5756 * 1000 1000 * * 5700 1000 0 T 60 * * 5288 2270 * 7209 4225 3861 2213 4860 7103 5816 * 4749 4812 4254 2761 3784 * 5828 60 19 6232 * 1000 1000 * * 5700 1000 0 A 61 613 3447 * * * 2953 * * * 3928 * * * * * 6510 6803 4650 * * 61 29 5657 * 1000 1000 * * 5700 1000 0 E 62 * * 4768 2251 * * * 4306 2849 5776 * 7422 * 5076 3734 4671 2076 2656 * * 62 0 * * * * * * 5700 0 0 V 63 * 6717 6212 * 6246 * * 1882 * 5228 * * 6266 * * * 6648 661 * 6602 63 0 * * * * * * 5700 0 0 V 64 7147 * * 2908 * 6538 * 2996 4489 1840 6232 7209 * 5263 * 5579 4130 1859 * * 64 0 * * * * * * 5700 0 0 S 65 3895 * 4512 1327 * 2826 5321 * 3227 7091 * 4582 6468 4224 4087 4480 * * * * 65 12 6867 * 0 * * * 5700 1000 0 H 66 5849 6538 4649 4289 5678 * 1454 4654 3159 5515 5725 4876 6212 2661 * 5691 5049 4366 * * 66 24 5915 * 0 * * * 5700 1578 0 G 67 3572 6941 4698 4408 2957 3404 * 3640 3810 3733 6510 * 6461 * 6277 4648 2410 3489 * 5654 67 11 7091 * 2000 415 * * 5700 1000 0 R 68 5515 * 5623 5420 * * * * 1547 3074 6561 6643 * 4409 1625 4588 4644 * * * 68 0 * * * * * * 5700 0 0 H 69 3469 6845 2402 3257 * 1422 7354 * 6612 6212 * 4850 * 6904 6150 3858 4188 6461 * 6390 69 16 * 6461 * * * * 5700 0 0 D 70 3814 * 3193 3410 * 5100 4713 * 2245 * 6268 4704 2040 5454 3850 5734 6540 * 6237 5802 70 0 * * * * 0 * 5693 0 1000 K 71 * * * 4193 6150 * * * 465 4895 4446 * 4165 * 5756 * 4954 6212 * 7078 71 0 * * * * * * 5700 0 0 V 72 * 6131 * 4414 * * * 1824 4005 3925 5145 * * 3822 4916 * 3956 1675 * 5756 72 20 * 6212 * * * * 5700 0 0 R 73 * * 7009 6854 6065 * 6349 2080 4119 2317 * 6892 6265 5683 3229 6631 2939 2968 * 4451 73 15 * 6555 * * * 0 5688 0 1000 I 74 3996 6267 * * * 5374 3883 1896 5596 6580 4705 * * * 4459 3852 4817 1583 6623 * 74 0 * * * * * 0 5683 0 1450 I 75 5931 * * 4274 1318 4690 5229 3503 * 4114 6257 * * 5148 6161 * * 3616 * 2454 75 0 * * * * 1015 985 5683 0 1450 K 76 * * * * 6302 * 4443 * 564 * 5807 * * 5096 2782 6933 6110 4555 * 7096 76 0 * * * * 0 * 5688 0 1000 F 77 5953 * * * 2174 * 3595 * 1854 6461 3023 * 6940 6281 5812 6278 4883 * * 2451 77 0 * * * * * * 5700 0 0 R 78 * * * 6803 * * 5898 4740 898 5420 * 5816 6940 5725 1694 6643 * * 6270 * 78 14 6648 * 0 * * * 5700 1000 0 R 79 4235 * * * * 6803 * 5515 3185 * * 4137 2720 4966 1097 3351 * * * * 79 0 * * * * * * 5700 0 0 R 80 * * * * * * 4932 * 1606 * * * * 5751 787 5070 * 6555 * * 80 32 5515 * 0 * * * 5700 1000 0 K 81 6116 4974 * * * * 4775 * 542 * * 6150 * 4073 4313 * 3580 5444 * * 81 23 * 5953 * * * * 5700 0 0 H 82 4871 * 4548 * * 2133 3116 * 3286 * * 2286 * 4650 2326 5397 6770 * * * 82 0 * * * * 0 * 5669 0 1000 H 83 5816 * * 6116 4096 * 3477 5892 6232 * 6928 7147 * 6868 5181 2631 3315 5466 5953 1193 83 0 * * * * * * 5700 0 0 M 84 4990 6868 6181 4869 * * 3370 * 2276 5751 4347 * * 3509 1554 4699 4630 4883 * * 84 0 * * * * * * 5700 0 0 K 85 * * * * 6058 * * * 1361 4905 * * * * 1066 6068 4772 5349 6894 * 85 0 * * * * * * 5700 0 0 R 86 5731 * * 5712 3782 * 4797 4452 1572 3557 5720 7366 * 5657 2931 5717 2701 6181 7014 5953 86 0 * * * * * * 5700 0 0 Q 87 4598 * * * 4522 * 5816 3519 2812 4430 6237 2543 * 3059 3344 5756 3916 4506 4713 4286 87 0 * * * * * * 5700 0 0 G 88 * * * * 5051 473 * 6270 4399 * * * * 5098 4219 4573 5561 6638 4932 * 88 47 * 4973 * * * * 5700 0 0 H 89 * * * 6260 4204 * 528 4752 6029 * 5795 * * 6866 * 3709 * 4741 * 4440 89 0 * * * * 943 1060 5627 0 1575 R 90 * * * 5734 * * * * 2798 * * * * 5833 391 4927 6456 6267 * * 90 0 * * * * * 0 5697 0 1000 Q 91 5220 * 4896 5482 * 6008 3465 6184 * * * * 4714 615 4516 4967 6869 5503 * * 91 0 * * * * 0 * 5697 0 1000 W 92 5442 5151 3390 3262 4318 4908 6868 * 2743 5630 * 5325 2682 3885 3894 4906 6602 4936 3984 4949 92 0 * * * * * * 5700 0 0 F 93 6058 * * * 3531 * 5665 4578 * 1834 3747 6075 * 3832 * * 5816 3601 * 1753 93 0 * * * * * * 5700 0 0 T 94 5441 * * * * * 6510 6277 * 5821 * * * 5417 * 3510 349 5279 * 6246 94 0 * * * * * * 5700 0 0 E 95 6002 * 6026 4201 * 5194 6068 3342 2579 4468 4646 6643 6468 5815 1955 6996 3750 2923 * 6602 95 0 * * * * * * 5700 0 0 I 96 * * * * 3973 * * 1443 * 1368 5657 * * * * * * 2633 * * 96 0 * * * * * * 5700 0 0 K 97 * * * 5320 7078 * * 6367 1711 3607 4661 * * 4832 1343 5538 4827 4939 * 6700 97 0 * * * * * * 5700 0 0 I 98 * * * * * * * 641 * * * * * * * * * 1478 * * 98 0 * * * * * * 5700 0 0 T 99 6607 * 3087 3142 * 5263 * 4203 3536 4286 5582 2858 * 5679 6947 3526 2291 3978 * * 99 0 * * * * * * 5681 0 0 G 100 4465 6831 2479 2331 * 3691 5467 * 3233 * * 4750 * 5552 5500 2109 4812 * * 6215 100 0 * * * * * * 5681 0 0 I 101 * * * * 6210 * * 525 * 2849 * * * * * * * 2711 * * 101 0 * * * * * * 5661 0 0 Q 102 * * * 1129 * * * * 1637 * * * * 3320 3045 * * * * * 102 0 * * 0 * * * 5251 0 0 //