HHsearch 1.5 NAME c6sl5G_ FAM FILE c6sl5G_ COM /bmm/www/servers/phyre2/HH/hhmake -i c6sl5G_.a3m DATE Sat Jun 27 08:36:53 2020 LENG 101 match states, 101 columns in multiple alignment FILT 10 out of 14 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.2 EVD 0.4845 2.6607 SEQ >ss_dssp CCHHHHHHHHHHHHHHHHHHTSHHHHHHHTSSCCCSSSSSCCCGGGTCTTTSCCCSCCCCCSSSSCCSSHHHHGGGHHHHTSHHHHTCGGGSSSCCCSCC C >sa_dssp EEEEEBCDDACEDCDDDCCEEDBDDDCEDDEEEEEDDEEEDECEEDEDEEDEDEEEEEEEEDEEDBCEECDEEDBEBCDECDDEECDDDDEEDEEEDEEE E >ss_pred CCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECC C >ss_conf 9821797212599999656873212477766420731258643300246776765565304678885321046689999999996531002667132114 9 >Consensus lepxvxIsxStxxxLaLGRFVFlpxQRxxvxxxxxPxxxGpkTxxxxxxxRxqexxxixxtksnDPaGFxxWxgaiGHxvgfxxLAtxSxqxxxxxxxxx x >c6sl5G_ LEPAVAIGGSTVSFLALGRFVFLPYQRRRTEMEVGPGRLGPKTTGDTFFDRLQKPASFVETKSKDPSGFGGWHAALGHVFGYFLLACSSLQDAGQVIAHW G >UniRef50_Q00327(46-134:143) Photosystem I reaction center subunit V, chloroplastic n=7 Tax=Magnoliophyta RepID=PSAG_HORVU E=4e-05 s/c=0.55 id=43% cov=80% LEPSVVISLSTGLSLVMGRFVFFNFQRENVAKQV------PEQNGKTHFeagdERAKEFAGIL--KSNDPVGFNlvdvlAW-GSIGHIVAYYILATTS-- ---------- >UniRef50_Q9AXG9(28-128:143) PsaG-like protein n=1 Tax=Dunaliella salina RepID=Q9AXG9_DUNSA E=3e-32 s/c=1.38 id=75% cov=95% LEPAVAIGGSTVSFLALGRFVFLPYQRRRTEMEVGPGRLGPKTTGDTFFDRLQEACFLRGDQDKGPSGFGlidviGWGAlATRRLVLFFFLP------EN QVIAHWG >UniRef50_A4RX32(25-115:118) PsaG, PSI-G, subunit V, photosystem I polypeptide n=2 Tax=Ostreococcus RepID=A4RX32_OSTLU E=6e-13 s/c=0.83 id=39% cov=86% -DVNVVISSANAICLALGRFVFLPYQRAQVERVGAPTQNG-QTHFAAGDSRAEEASFIVST--NDPAGFTivdllAW-GSIGHAVGFLALASQSAQ---- ------ >UniRef50_C1FE99(46-135:140) Photosystem I subunit V n=2 Tax=Micromonas RepID=C1FE99_9CHLO E=6e-11 s/c=0.76 id=38% cov=85% -DVQLTISGCNALALALGRFVFLPAIREKTASQ-GPGVQNGESHFTAGDARAEEAASVFAT--NDPAGFTivdllMW-GSIGHAIGYSALASQSF----- ------ >UniRef50_Q9S7N7(62-151:160) Photosystem I reaction center subunit V, chloroplastic n=17 Tax=Magnoliophyta RepID=PSAG_ARATH E=2e-24 s/c=1.26 id=41% cov=85% LSPSIVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNG-KTHFEAGDDRAKEYVSLL--KSNDPIGFNivdvlAW-GSIGHIVAYYILATSS------ ------ >UniRef50_Q00327(46-134:143) Photosystem I reaction center subunit V, chloroplastic n=7 Tax=Magnoliophyta RepID=PSAG_HORVU E=2e-22 s/c=1.19 id=41% cov=84% LEPSVVISLSTGLSLVMGRFVFFNFQRENVAKQV-PEQNG-KTHFEAGDERAKEFAGIL--KSNDPVGFNlvdvlAW-GSIGHIVAYYILATTS------ ------ >UniRef50_A9SH79(71-159:166) Predicted protein n=3 Tax=Embryophyta RepID=A9SH79_PHYPA E=4e-21 s/c=1.15 id=43% cov=80% ---ALTITLSTGALLFLGRFVFLPFQRDNVSRQGLPEQNGV-THYDAGDTRAQEVVGML--KTNDPAGFTlvdvlAW-GALGHAIGFFILAT-------- ------ >UniRef50_P14224(32-124:126) Photosystem I reaction center subunit V, chloroplastic n=2 Tax=Chlamydomonas reinhardtii RepID=PSAG_CHLRE E=1e-20 s/c=1.08 id=55% cov=88% LDPQIVISGSTAAFLAIGRFVFLGYQRREANFD---STVGPKTTGATYFDDLQKNSTIFAT--NDPAGFNiidvaGW-GALGHAVGFAVLAINSLQGAN- ------ >UniRef50_Q9SPM4(17-105:112) Photosystem I reaction center subunit V, chloroplastic n=2 Tax=Bryopsida RepID=PSAG_TORRU E=1e-16 s/c=0.98 id=41% cov=82% ---SFIISASTAALLALGRFVFLPFQRSMVSRHGLPEQNGVPTTRRVTAVRRRWWSML---KTNDPAGFTlvdvlAW-GALGHAVGFFILATAT------ ------ # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * L 1 * * * * * * * * * 0 * * * * * * * * * * 1 0 * * * * * * 1899 0 0 E 2 * * 1279 1056 * * * * * * * * * * * 3225 * * * * 2 0 * * * * * * 2184 0 0 P 3 * * * * * * * * * * * * 469 * * * * 1850 * * 3 0 * * * * * * 2184 0 0 A 4 1591 * * * * * * * * * * 3311 * 2133 * 1559 * * * * 4 0 * * * * * * 2336 0 0 V 5 * * * * 3133 * * 2435 * 2310 * * * * * * * 1002 * * 5 0 * * * * * * 2336 0 0 A 6 2010 * * * * * * 3133 * * * * * * * * 2310 1197 * * 6 0 * * * * * * 2336 0 0 I 7 * * * * * * * 0 * * * * * * * * * * * * 7 0 * * * * * * 2336 0 0 G 8 * * * * * 2010 * * * * * * * * * 582 3578 * * * 8 0 * * * * * * 2336 0 0 G 9 3133 * * * * 1070 * * * 1694 * * * * * 3311 * * * * 9 0 * * * * * * 2336 0 0 S 10 3311 3084 * * * * * * * * * * * * * 356 * * * * 10 0 * * * * * * 2336 0 0 T 11 * * * * * * * * * * * 2193 * * * * 356 * * * 11 0 * * * * * * 2336 0 0 V 12 1176 * * * * 1694 * * * * * * * * * * * 2010 * * 12 0 * * * * * * 2336 0 0 S 13 1700 * * * * * * 3311 * 1543 * * * * * 2010 * * * * 13 0 * * * * * * 2336 0 0 F 14 3084 3311 * * 1481 * * * * 2339 * * * * * 2150 * * * * 14 0 * * * * * * 2336 0 0 L 15 * * * * * * * * * 0 * * * * * * * * * * 15 0 * * * * * * 2336 0 0 A 16 533 * * * 2656 * * * * * * * * * * * * 2733 * * 16 0 * * * * * * 2336 0 0 L 17 * * * * * * * 3184 * 435 2733 * * * * * * * * * 17 0 * * * * * * 2336 0 0 G 18 * * * * * 0 * * * * * * * * * * * * * * 18 0 * * * * * * 2336 0 0 R 19 * * * * * * * * * * * * * * 0 * * * * * 19 0 * * * * * * 2336 0 0 F 20 * * * * 0 * * * * * * * * * * * * * * * 20 0 * * * * * * 2336 0 0 V 21 * * * * * * * * * * * * * * * * * 0 * * 21 0 * * * * * * 2336 0 0 F 22 * * * * 0 * * * * * * * * * * * * * * * 22 0 * * * * * * 2336 0 0 L 23 * * * * 2150 * * * * 368 * * * * * * * * * * 23 0 * * * * * * 2336 0 0 P 24 * * * * * 3184 * * * * * 2150 589 * * * * * * * 24 0 * * * * * * 2336 0 0 Y 25 3084 * * * 1241 * * * * * * * * * * * * * * 1123 25 0 * * * * * * 2336 0 0 Q 26 * * * * * * * 3084 * * * * * 181 * * * * * * 26 0 * * * * * * 2336 0 0 R 27 * * * * * * * * * * * * * * 0 * * * * * 27 0 * * * * * * 2336 0 0 R 28 3311 * 3578 1543 * * * * * * * * * * 1481 3133 * * * * 28 0 * * * * * * 2336 0 0 R 29 * * * 3184 * * * * 3084 * 3133 1694 * 3311 2010 * * * * * 29 0 * * * * * * 2336 0 0 T 30 3184 * * * * * * * * * * * * * * * 1449 933 * * 30 0 * * * * * * 2336 0 0 E 31 1543 * * 1519 * * * * * * * 3184 * * * 2339 * * * * 31 0 * * * * * * 2336 0 0 M 32 * * * * 3184 * * * 2150 * 2010 * * * 1745 3084 * * * * 32 0 * * * * * * 2336 0 0 E 33 * * 3184 2010 * * 3133 * * * * * * 1228 * * * 3311 * * 33 373 * 2133 * * * * 2336 0 0 V 34 * * * * * 1040 * * * * * * * * * * * 961 * * 34 311 * 2367 * * 966 1034 2119 0 1503 G 35 2912 * * * * 1077 * * * 1347 * * * * * * * * * * 35 0 * * * * 1688 536 2200 0 1480 P 36 * * * * * * * * * * * * 0 * * * * * * * 36 0 * * * * 951 1051 2223 0 1414 G 37 * * * 1371 * 1353 * * * * * * * * * 3113 3236 * * * 37 0 * * * * * 0 2306 0 1000 R 38 * * * * * * * * * * * * * 1021 1921 * 3113 2971 * * 38 0 * * * * * 0 2306 0 1000 L 39 * * * * * * * * * 1921 * 1021 * 2971 * * * 3113 * * 39 0 * * * * * 0 2306 0 1000 G 40 * * * * * 197 * * * * * 2971 * * * * * * * * 40 488 * 1802 * * 0 * 2306 0 1000 P 41 * * * * * 2629 * * * * * * 804 * * * * 1913 * * 41 193 * 3000 * * 0 * 2271 0 1428 K 42 * * * 2222 * * * * 876 * * * 2924 3198 * * * * * * 42 0 * * * * 0 * 2322 0 1000 T 43 * * * * * * * * * * * * * 3663 * 3084 316 * * * 43 0 * * * * * * 2336 0 0 T 44 * * * * * * 1156 * * * * 3663 * * * * 1082 * * * 44 0 * * * * * * 2336 0 0 G 45 * * * * 1454 1193 * * * * * * * * 3133 * * * * 3578 45 0 * * * * * * 2336 0 0 D 46 2246 * 1591 2772 * * * * 3663 * * * * * 3133 * 3084 * * * 46 0 * * * * * * 2336 0 0 T 47 1156 * * * * * * * * * * * * * * * 1193 3133 * * 47 0 * * * * * * 2336 0 0 F 48 * * * * 2010 1156 3663 * * * * * * * * * 3133 * * 3184 48 0 * * * * * * 2336 0 0 F 49 3133 * 1156 * 1193 * * * * * * * * * * * * * * * 49 119 3663 * 2000 415 * * 2336 1000 0 D 50 3084 * 1207 2733 * * * * * * * * * * * 3311 3578 3133 * * 50 0 * * * * * * 2336 0 0 R 51 * * 3184 * * * * * * * * * * * 168 * * * * * 51 0 * * * * * * 2336 0 0 L 52 922 * * * * * * * * 1481 * * * * 3133 * * * * * 52 0 * * * * * * 2336 0 0 Q 53 * * * 2193 * * * * 2150 * * * * 1178 3133 * * * * * 53 0 * * * * * * 2336 0 0 K 54 * * * 584 * * * * 2192 * * * * * * * * * 3133 * 54 0 * * * * * * 2336 0 0 P 55 1481 * * * 2733 * * * * * * 3184 3200 * * * * 3578 3133 3738 55 0 * * * * * * 2336 0 0 A 56 1407 2842 * * * * * * * * * * * * * 1623 * 2656 * * 56 0 * * * * * * 2336 0 0 S 57 * * * * 2058 2095 * * * * 3133 * * * * 1729 3184 * * * 57 0 * * * * * * 2336 0 0 F 58 * * * * 3200 * * 1469 * 1606 3578 * * * * * * 3084 * * 58 175 * 3133 * * * * 2336 0 0 V 59 * * * * 1991 * * * * 1471 * * * * 2712 * * 2088 * * 59 645 * 1471 * * * 0 2243 0 1000 E 60 1301 * * 2397 * 2309 * * * * * * * * * 2305 * * * * 60 0 * * * * * 0 1980 0 1579 T 61 * * 2309 * * * * * * * * * * * * * 325 * * * 61 1352 * 717 * * 0 * 1980 0 1579 K 62 * * * * * * * * 313 * * * * 2356 * * * * * * 62 0 * * * * * 0 2004 0 1669 S 63 * * 2356 * * * * * * * * * * * * 967 1770 * * * 63 0 * * * * 0 * 2004 0 1669 K 64 * * * * * * * * 2010 * * 412 * * * * * * * * 64 0 * * * * * * 2336 0 0 D 65 * * 217 * * 2842 * * * * * * * * * * * * * * 65 0 * * * * * * 2336 0 0 P 66 * * * * * * * * * * * * 0 * * * * * * * 66 0 * * * * * * 2336 0 0 S 67 926 * * * * * * 3738 * * * * * * * 2010 * 2733 * * 67 0 * * * * * * 2336 0 0 G 68 * * * * * 0 * * * * * * * * * * * * * * 68 0 * * * * * * 2336 0 0 F 69 * * * * 0 * * * * * * * * * * * * * * * 69 0 * * * * * * 2336 0 0 G 70 * * * * * 2010 * * * * * 1576 * * * * 1264 * * * 70 3200 166 * 2322 322 * * 2336 2286 0 G 71 933 * * * * 1481 * * * * 3084 * * * * * * * * * 71 0 * * * * * * 2336 0 0 W 72 * * * * * * * * * * * * * * * * * * 0 * 72 2010 * 412 * * * * 2336 0 0 H 73 * * * * * 1088 917 * * * * * * * * * * * * * 73 0 * * * * 0 * 1171 0 2058 A 74 2010 * * * * 412 * * * * * * * * * * * * * * 74 217 2842 * 0 * * * 2336 1000 0 A 75 847 * * * * * * * * * * * * * * 1171 * * * * 75 0 * * * * * * 2336 0 0 L 76 * * * * * * * 1171 * 1263 * * * * * * 2842 * * * 76 0 * * * * * * 2336 0 0 G 77 * * * * * 217 * * * * * * * * 2842 * * * * * 77 0 * * * * * * 2336 0 0 H 78 * * * * * * 217 * * * * * * * 2842 * * * * * 78 0 * * * * * * 2336 0 0 V 79 926 * * * * * * 2150 * 2842 * * * * * * * 3200 * * 79 0 * * * * * * 2336 0 0 F 80 * * * * 3200 * * 2310 * * * * * * * * * 536 * * 80 0 * * * * * * 2336 0 0 G 81 2150 * * * * 655 * * * 2842 * * * * * * * * * * 81 0 * * * * * * 2336 0 0 Y 82 * * * * 868 * * * * * * * * * * * * * * 1145 82 0 * * * * * * 2336 0 0 F 83 3184 * * * 1165 * * * * 3311 * * * * * 3084 * * * 2150 83 0 * * * * * * 2336 0 0 L 84 2193 * * * 2842 * * 1241 * 3200 * * * * * * * 3184 * * 84 0 * * * * * * 2336 0 0 L 85 * * * * * * * * * 0 * * * * * * * * * * 85 0 * * * * * * 2336 0 0 A 86 217 * * * * * * * * * * * 2842 * * * * * * * 86 217 * 2842 * * * * 2336 0 0 C 87 * 2634 * * * * * 3006 * * * * * * * 2034 1088 * * * 87 0 * * * * * 0 2192 0 1000 S 88 2782 * * * * * * * * * * 2912 * 1918 * 1886 2422 * * * 88 0 * * * * * 0 2189 0 1000 S 89 * * * * * * * * * * * * * * * 227 2782 * * * 89 0 * * * * * 0 2189 0 1000 L 90 2089 * * * 2027 * * * * 944 * * * * * * * * * * 90 0 * * * * * 0 1851 0 1000 Q 91 * * * * * * * * * * * * * 0 * * * * * * 91 0 * * * * * 0 1657 0 1000 D 92 * * 911 * * 1095 * * * * * * * * * * * * * * 92 0 * * * * 0 * 1332 0 1000 A 93 543 * * 1672 * * * * * * * * * * * * * * * * 93 0 * * * * * * 1478 0 0 G 94 * * * * * 1600 * * * * * 577 * * * * * * * * 94 0 * * * * * * 1478 0 0 Q 95 * * * * * * * * * * * * * 0 * * * * * * 95 0 * * * * * * 1171 0 0 V 96 * * * * * * * * * * * * * * * * * 0 * * 96 0 * * * * * * 1171 0 0 I 97 * * * * * * * 0 * * * * * * * * * * * * 97 0 * * * * * * 1171 0 0 A 98 0 * * * * * * * * * * * * * * * * * * * 98 0 * * * * * * 1171 0 0 H 99 * * * * * * 0 * * * * * * * * * * * * * 99 0 * * * * * * 1171 0 0 W 100 * * * * * * * * * * * * * * * * * * 0 * 100 0 * * * * * * 1171 0 0 G 101 * * * * * 0 * * * * * * * * * * * * * * 101 0 * * 0 * * * 1171 0 0 //