HHsearch 1.5 NAME c6opfA_ FAM FILE c6opfA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c6opfA_.a3m DATE Sat Jul 6 09:51:54 2019 LENG 85 match states, 85 columns in multiple alignment FILT 62 out of 66 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.6 EVD 0.4637 1.7766 SEQ >ss_dssp CHHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHHHTTTCHHHHHHHHHHHHHTTCSCGGGBCCCCHHHHHHHHHHHHHHHHHHHHC >sa_dssp EECEEEEDEDDECCDDACEBBDACEECBDDAAEEAECDCCDAADCACDBCEEEDADDEABEEDDCDDDCDDACDDADEDBDEDEE >ss_pred CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHC >ss_conf 9822203189999999999709999999999998099999999999999853899979965301335356899999999998509 >Consensus xxxxxslxxkexxilxfsxxTgLnxxwsxkCLeexxWdxxxAlxxFxxLkaxgxIPpeAFxxxxxxxxxxxxxxxxxxxxxxxxx >c6opfA_ QAEEDSLDVKDHKLLLFQEVTGLISTWVTSIVEEADWDFERALKLFIQKNADHEIPDLAFANLSKADKRSLAVARAELVLEQIQQ >UniRef50_UPI0000E45D20(674-735:736) PREDICTED: similar to nuclear RNA export factor 1 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E45D20 E=9e-17 s/c=1.42 id=29% cov=56% -------------LAEFMRVSGMNADWSMKCLVENNWNYENSGKVFTSLKSEGKIPPEAF------------------------- >UniRef50_Q9Y8G3(536-596:596) mRNA export factor mex67 n=2 Tax=Schizosaccharomyces pombe RepID=MEX67_SCHPO E=2e-16 s/c=1.43 id=27% cov=73% RPEQAMLDTRQQIVLKIKAETGLNDYYAHMCCEQNNWDYNSALASFLELKSRNVIPAEAFS------------------------ >UniRef50_UPI00018832F9(490-549:549) small bristles-like n=1 Tax=Nasonia vitripennis RepID=UPI00018832F9 E=6e-13 s/c=1.26 id=23% cov=66% -----SPNEKENLILIFQESSQMKHEHCEKYLKEVEWNLKKAIMNFLNHYKNGQLPKDAF------------------------- >UniRef50_B4M4Z1(504-571:574) GJ10139 n=3 Tax=Drosophila RepID=B4M4Z1_DROVI E=3e-09 s/c=0.92 id=25% cov=71% --------VQRNLMCMLSAETRLKSRWSSKFLKDTNWDYQQALLAFQTLLRRRQIPEKAFEGDTKPE------------------ >UniRef50_Q9XVS7(574-627:628) Nuclear RNA export factor 1 n=4 Tax=Caenorhabditis RepID=NXF1_CAEEL E=1e-11 s/c=1.30 id=17% cov=49% -----ALPIREEMIKAMCQFSGMIPPFSEKCLADCAWNFDFACQKF--------------------------------------- >UniRef50_Q0UUQ5(303-355:355) Putative uncharacterized protein n=2 Tax=Pleosporineae RepID=Q0UUQ5_PHANO E=1e-08 s/c=1.15 id=28% cov=51% ---------QEQMILYVQQATNLTRDYAVQCLEAGNWDLQQASDLFTQSRA---------------------------------- >UniRef50_Q6CGM7(473-529:531) YALI0A18007p n=1 Tax=Yarrowia lipolytica RepID=Q6CGM7_YARLI E=6e-05 s/c=0.85 id=27% cov=53% ----------------LMEATRLNARYARMCAEQAGFVPEQTMALFKQAQEGGSLPPDAF------------------------- >UniRef50_D2VFN8(434-484:484) Putative uncharacterized protein AM44 n=1 Tax=Naegleria gruberi RepID=D2VFN8_NAEGR E=9e-08 s/c=1.14 id=23% cov=52% -------------IVQFTSITGLRREYALPCLEYSNWNISNAINTFNTEKMNGNIP----------------------------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * Q 1 * * * * * * * * * * * * * 579 1597 * * * * * 1 0 * * * * * * 1996 0 0 A 2 403 * * * * * * * * * * * 2036 * * * * * * * 2 0 * * * * * * 2264 0 0 E 3 * * * 1206 * * * * * * * * 2011 * * 1651 * * * * 3 0 * * * * * * 2264 0 0 E 4 2478 * 2875 1561 * * * * * * * * * 1534 * * * * * * 4 0 * * * * * * 2741 0 0 D 5 1512 * 1073 2521 * * * * * * * * * * * * * * * * 5 0 * * * * * * 2741 0 0 S 6 3182 * * * * 3163 * * * * 3105 * * * 3092 876 * * * * 6 0 * * * * * * 3545 0 0 L 7 * * * * * * * 2127 * 895 * * 2979 * * * * 3231 * * 7 0 * * * * * * 3545 0 0 D 8 * * 1616 2276 * 4030 * * * * * 2657 3471 3483 * 3879 * * * * 8 0 * * * * * * 3949 0 0 V 9 3231 * * 1922 * * * 2557 * 3832 * * * * * * 3616 1700 * * 9 0 * * * * * * 4068 0 0 K 10 * * * 3993 * * * * 1098 * * * * 2031 2149 * * * * * 10 0 * * * * * * 4376 0 0 D 11 * * 3438 1529 * * * * 4414 3993 * * * 1827 4281 3081 * * * * 11 0 * * * * * * 4376 0 0 H 12 4400 * 4423 2690 * * 2311 * * * * 2231 * 1571 * * * * * * 12 0 * * * * * * 4376 0 0 K 13 3689 * * * * * * 4210 1888 2115 1812 * * * * * 4789 4425 * * 13 0 * * * * * * 4376 0 0 L 14 * * * * * * * 1705 * 1906 3360 * * * * 4418 5053 1987 * * 14 42 5114 * 0 * * * 4607 1000 0 L 15 3410 4583 * * * * 4715 2832 4666 1390 3934 4836 * 4233 * * 3786 4698 * * 15 0 * * * * * * 4607 0 0 L 16 2960 * * 2956 4837 * * 3675 3668 2576 4583 * * 2882 * 5148 5053 4277 * 3385 16 0 * * * * * * 4607 0 0 F 17 * * * * 864 * * 4816 * 1637 4054 * * * * * * 4897 * * 17 0 * * * * * * 4741 0 0 Q 18 3485 4180 * * * * 4078 5984 3570 5232 3071 * * 2610 * 1578 4266 * * * 18 0 * * * * * * 4741 0 0 E 19 3390 * * 1812 * * * * 4553 5112 * 3599 * 2119 3593 5150 3723 4358 * * 19 0 * * * * * * 4741 0 0 V 20 3526 * * 3142 4999 * * 2804 * 2738 5342 * * 2028 3869 4280 * 4281 * 4858 20 0 * * * * * * 4741 0 0 T 21 * * * * * * * * * * * * * * * 1998 416 * * * 21 0 * * * * * * 4598 0 0 G 22 * * * * * 875 * * 3951 * * 2889 * 4010 3208 4000 5481 * * * 22 0 * * * * * * 4598 0 0 L 23 * * * * * * * * * 885 1125 * * * * * * * * * 23 0 * * * * * * 4598 0 0 I 24 * * * * * * * 3848 2929 * * 973 * * 3631 5335 2829 4520 * * 24 0 * * * * * * 4598 0 0 S 25 2871 * 4901 * * * 3773 4817 5584 3085 5481 6108 2351 4347 3692 3578 4774 4020 * 4603 25 0 * * * * * * 4598 0 0 T 26 5094 * 3793 1611 * 6174 * * 3611 * * * 2887 3343 3806 5426 5072 3353 * 5681 26 0 * * * * * * 4598 0 0 W 27 * * * * 1970 * 5091 * * * * * * * * * * * 1078 2049 27 0 * * * * * * 4596 0 0 V 28 1683 2321 * * * * * * * 4962 * * * * * 1439 4098 5094 * * 28 0 * * * * * * 4596 0 0 T 29 6514 6367 * 2779 4826 6124 4297 * 3368 3832 5093 * * 3364 3036 5592 2794 3657 * 3815 29 0 * * * * * * 4596 0 0 S 30 * * 3528 5304 * * * * 1536 * 2213 * 5559 2856 3377 5094 4552 * * * 30 0 * * * * * * 4596 0 0 I 31 * 612 * 4746 4261 * * 3371 * 3374 * * * * * * * * * 3990 31 0 * * * * * * 4723 0 0 V 32 3397 4226 * * * * * * * 349 * * * * * * * 3910 * * 32 42 5125 * 0 * * * 4766 1000 0 E 33 3786 * 4980 961 * 5848 3948 * 4402 * * 6169 * 3421 * 4602 4315 4207 * * 33 0 * * * * * * 4766 0 0 E 34 5557 * 2234 1639 * 5983 * * * 5236 4965 5985 * 1834 * 4233 * * * 5554 34 0 * * * * * * 4784 0 0 A 35 2460 4675 5089 4966 * 5559 5770 * * * * 1780 * * * 2538 3457 3728 * 4370 35 0 * * * * * * 4785 0 0 D 36 4851 * 4499 3005 * 2156 4838 * 5234 6309 * 1656 * 3307 * 3939 * * * 6100 36 0 * * * * * * 4782 0 0 W 37 * * * * 3938 5199 * * * * * * * * * * * * 231 4165 37 0 * * * * * * 4641 0 0 D 38 * * 970 5482 * * * * * * * 1498 * * * 4381 * 3938 * * 38 0 * * * * * * 4641 0 0 F 39 * * * * 2170 * * 2982 5418 3185 3983 * 3721 * * * 5850 5727 * 1546 39 0 * * * * * * 4641 0 0 E 40 4739 * 2893 1790 * * * * 3383 * * 2881 5396 3795 4235 3676 3644 * * * 40 0 * * * * * * 4641 0 0 R 41 3589 * * * 5400 4304 5121 * 2741 5837 * 3668 * 2396 2196 3268 * 4157 * * 41 0 * * * * * * 4641 0 0 A 42 205 * * * * * * * * * * * * * * 3892 3938 * * * 42 41 5159 * 1000 1000 * * 4641 1000 0 L 43 3118 5368 * 6126 6285 4720 * 2623 * 1341 3659 * * 5716 * 4163 4737 4414 * * 43 0 * * * * * * 4645 0 0 K 44 2421 * 4597 4120 4959 * 5310 * 2641 5187 5735 4704 * 2392 5452 3658 5079 4296 4679 * 44 0 * * * * * * 4645 0 0 L 45 2779 5203 * * * 4849 * 3867 4317 3008 4737 3170 * 5310 3843 4144 3806 2491 * * 45 0 * * * * * * 4645 0 0 F 46 * * * * 106 * * * * 4767 * * * * * * * 4868 * * 46 25 * 5868 * * * * 4645 0 0 I 47 3557 * * 2981 4743 * * 5438 3923 2487 4033 3726 * 3799 5617 5009 2332 5318 * * 47 0 * * * * * 0 4906 0 1000 Q 48 6240 * 3517 1923 * 5766 6144 * 3545 4234 6299 3938 * 2316 5160 3591 3741 * * * 48 0 * * * * 0 * 4906 0 1000 K 49 3622 * 5287 4123 * * 5548 * 3587 791 3704 * * 5970 * 4041 * * * * 49 0 * * * * * * 4926 0 0 N 50 4756 * 5367 * 5333 * 3844 * 1636 5525 * 3055 * 2419 4749 * * * * 2677 50 0 * * * * * * 4926 0 0 A 51 1694 * 5176 2816 * 6290 * * 2961 * 5432 4335 * 4938 5525 3117 4400 3467 * * 51 61 * 4588 * * * * 4926 0 0 D 52 3272 * 5352 2630 * 3502 * * 3001 5694 4713 2599 * 3362 3856 4083 * 4337 * * 52 78 * 4252 * * * 0 4859 0 1216 H 53 5296 * 3324 * * 1110 4438 * 5597 * * 1993 * * 3950 5121 * * * * 53 0 * * * * 1339 726 4810 0 1849 E 54 4150 * * 3256 * 5744 * * 2372 5839 * 4356 * 2179 3446 3064 3315 5155 * * 54 0 * * * * 0 * 4850 0 1602 I 55 * * * * * * * 507 * 2032 * * * * * * * 4276 * * 55 0 * * * * * * 4461 0 0 P 56 * * * * * * * * * * * * 89 * * 4064 * * * * 56 0 * * * * * * 4461 0 0 D 57 2642 * 3885 2513 * * * * 4317 * * * 1052 * * 3952 * * * * 57 0 * * * * * * 4344 0 0 L 58 4845 * 2060 1389 * * 3978 4475 4176 3852 * 5252 * 4751 * * * 4408 * * 58 0 * * * * * * 4344 0 0 A 59 193 * * * * 4018 * * 3980 * * * * * * * * * * * 59 0 * * * * * * 4344 0 0 F 60 * * * * 0 * * * * * * * * * * * * * * * 60 293 * 2443 * * * * 4344 0 0 A 61 1712 * * 3368 * * * * 3394 * * * * 3284 * 1533 * 4197 * * 61 0 * * * * * 0 3506 0 1000 N 62 2980 * * * * 2817 * * * * * 1727 * 2754 * * 1831 * * * 62 0 * * * * * 0 3234 0 1000 L 63 * * 2539 * * * * 1472 * 1630 2793 * * * * * * * * * 63 0 * * * * 0 * 2941 0 1000 S 64 1670 * * * * * * * * * * * * * * 1571 1518 * * * 64 0 * * * * * * 2969 0 0 K 65 * * * * * * * * 993 * * * * 1959 * 2056 * * * * 65 0 * * * * * * 2545 0 0 A 66 1946 * * * * * * * * * * * 2042 * * 2056 1959 * * * 66 0 * * * * * * 2545 0 0 D 67 * * 575 1605 * * * * * * * * * * * * * * * * 67 0 * * * * * * 2144 0 0 K 68 * * * * * * * * 893 * * * 1115 * * * * * * * 68 0 * * * * * * 1641 0 0 R 69 * * * * * * * * * * * * * * 0 * * * * * 69 0 * * * * * * 1641 0 0 S 70 * * * * * * * * * * * * * * * 0 * * * * 70 0 * * * * * * 1641 0 0 L 71 * * * * * * * * * 0 * * * * * * * * * * 71 0 * * * * * * 1000 0 0 A 72 0 * * * * * * * * * * * * * * * * * * * 72 0 * * * * * * 1000 0 0 V 73 * * * * * * * * * * * * * * * * * 0 * * 73 0 * * * * * * 1000 0 0 A 74 0 * * * * * * * * * * * * * * * * * * * 74 0 * * * * * * 1000 0 0 R 75 * * * * * * * * * * * * * * 0 * * * * * 75 0 * * * * * * 1000 0 0 A 76 0 * * * * * * * * * * * * * * * * * * * 76 0 * * * * * * 1000 0 0 E 77 * * * 0 * * * * * * * * * * * * * * * * 77 0 * * * * * * 1000 0 0 L 78 * * * * * * * * * 0 * * * * * * * * * * 78 0 * * * * * * 1000 0 0 V 79 * * * * * * * * * * * * * * * * * 0 * * 79 0 * * * * * * 1000 0 0 L 80 * * * * * * * * * 0 * * * * * * * * * * 80 0 * * * * * * 1000 0 0 E 81 * * * 0 * * * * * * * * * * * * * * * * 81 0 * * * * * * 1000 0 0 Q 82 * * * * * * * * * * * * * 0 * * * * * * 82 0 * * * * * * 1000 0 0 I 83 * * * * * * * 0 * * * * * * * * * * * * 83 0 * * * * * * 1000 0 0 Q 84 * * * * * * * * * * * * * 0 * * * * * * 84 0 * * * * * * 1000 0 0 Q 85 * * * * * * * * * * * * * 0 * * * * * * 85 0 * * 0 * * * 1000 0 0 //