HHsearch 1.5 NAME c6ob1C_ FAM FILE c6ob1C_ COM /bmm/www/servers/phyre2/HH/hhmake -i c6ob1C_.a3m DATE Sat Aug 17 08:19:43 2019 LENG 90 match states, 90 columns in multiple alignment FILT 55 out of 59 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.2 EVD 0.4201 0.4333 SEQ >ss_dssp CCCSTTCCCSSHHHHHHHHHHHHHHHHHHHTTSCCBCHHHHHHHHHHHHHSSCGGGSCCHHHHHHHHHHHHHTTSSEECSSCEECCSSCC >sa_dssp EEEEECEEDEEDCEDEDBDEEABECADDBAEEECEACCEEACEDAEDCAEEDEBCEDBDEECAECBADDBCEDEDADDDEEDBDCCEDEE >ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCEEEECCCCC >ss_conf 962034555567889845999999999998176778899999999998358988667898999999999975297899789566113689 >Consensus xxexesxvxsxxdqxxeemxvywxyIxgMLtNxgslplxRIhxmLkmfvxxxxxxxxxtxxeLxxfLxxxVxexkLxxxgGxYkLxKxxx >c6ob1C_ GSESDSGMASQADQKEEELLLFWTYIQAMLTNLESLSLDRIYNMLRMFVVTGPALAEIDLQELQGYLQKKVRDQQLVYSAGVYRLPKNCS >UniRef50_B6K4L3(617-701:701) Anaphase-promoting complex subunit 2 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K4L3_SCHJY E=6e-27 s/c=1.42 id=33% cov=96% -AEQVSAVQSSTETAADEMRIYWSFVVGMLTNLGALELERIHNMLTMFVP-PPNGYTRSQAELREFLALMIKEEKLEFTGGAYKLKQ--- >UniRef50_D2V3C9(518-601:601) Predicted protein n=1 Tax=Naegleria gruberi RepID=D2V3C9_NAEGR E=2e-16 s/c=1.03 id=31% cov=89% -------MTTAQSQ-EEELRVYQDIIINMIENFDSMPLAKIHNMLAMFALDPLPPFDKSLSELSSFLNILVKEEVLECDGGEYKIKR--- >UniRef50_A8P5I5(625-706:710) Anaphase-promoting complex subunit 2-like n=1 Tax=Brugia malayi RepID=A8P5I5_BRUMA E=1e-05 s/c=0.62 id=28% cov=83% ------------DDKNEDMEAvdaleqYWIYTKSFIANQEPVKAERLHTIFRMFASPG--QHGPTLEDVVAFLQRKVKLNLLSCVNGLYKVVKD-- >UniRef50_D1Z7Q7(1029-1114:1114) Whole genome shotgun sequence assembly, scaffold_7 n=1 Tax=Sordaria macrospora RepID=D1Z7Q7_SORMA E=1e-19 s/c=1.13 id=26% cov=93% -ADTEKPTTTINPKEQERNTMYWQYIKGMLTNASaSMPLAQMAMMMKMLIADGFPWTN---EQLGEFLAEKIAEGEMEvVSGGKYRLVK--- >UniRef50_A3LQ64(748-829:830) Predicted protein n=1 Tax=Pichia stipitis RepID=A3LQ64_PICST E=3e-15 s/c=1.01 id=28% cov=91% -----SGSDKSINLKFKELEVLWPYLKSMLENISYLKFERVKTLLKLTVPKDkFDFGTIDDSKLEDYLDWLVDEEKLEITQQSYKLK---- >UniRef50_C5DMX1(686-774:774) KLTH0G12342p n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DMX1_LACTC E=3e-15 s/c=0.93 id=33% cov=96% -SEIVNATDSVDLQQQQfidSMQKVLPFIKGMLTNLGSLKADKIHSFLKMAVPKEIG-YSATPSQLQLYLNALVEESKLVKTpNGAFRLAK--- >UniRef50_B9WER1(720-802:802) Anaphase-promoting complex (APC) subunit, putative n=4 Tax=Candida RepID=B9WER1_CANDC E=1e-13 s/c=0.93 id=28% cov=92% -----TSVKSSMESKFSEIAIIESYIITILQNLTSINFERMKTLLNLMVPKDKlNFANVNETLLEEYLDSLVEDSKIAFQNGNYSLPK--- >UniRef50_B2W8F0(866-936:943) Anaphase-promoting complex subunit Apc2 n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2W8F0_PYRTR E=6e-12 s/c=1.01 id=29% cov=80% -------IKSHTDLLEEKKHVYTAFIIGMLTNQGNMNTGRIAMMMRLMVQGGFPGGEA---EVRGLLAELEDGGRVVKVGG--------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 1000 0 0 S 2 1346 * * * * * * * * * * * * * * 721 * * * * 2 0 * * * * * * 2526 0 0 E 3 * * 2543 497 * * * * * * * * 3823 4342 * * * * * * 3 0 * * * * * * 3317 0 0 S 4 3989 * * * * 2959 * 3793 * 3163 4256 * * 3252 * 2040 2390 4905 * * 4 0 * * * * * * 3366 0 0 D 5 * * 2990 764 * * 4770 * 4408 * * * * * * 4149 * 2784 * * 5 0 * * * * * * 3426 0 0 S 6 * * * 3213 * 4562 * * 4739 * * 4287 * * 4114 896 2589 * * * 6 0 * * * * * * 3857 0 0 G 7 1370 * * 5227 * 1820 * * * 4217 * 4028 5007 * * 2876 * 5577 * * 7 0 * * * * * * 3930 0 0 M 8 4189 * * * * 4893 * 4009 5371 * 2626 * * * 5207 4120 3099 1114 * * 8 62 * 4569 * * * * 4093 0 0 A 9 1594 * 3346 5419 * 5274 * * 2606 4461 * * 5521 2984 * 4724 2994 * * * 9 56 4724 * 3000 193 0 * 4030 1000 1000 S 10 4159 * * * 5477 5533 * * 3709 * * 4960 * * * 683 2571 * * * 10 0 * * * * * * 4177 0 0 Q 11 2082 * 4960 4662 * * 4821 4306 * 4266 4078 * * 4252 * 2077 * 2283 * * 11 0 * * * * * * 4177 0 0 A 12 2724 * 3054 2679 * 4582 * 4392 * * 4327 5693 * 2222 4658 3205 4289 * * * 12 0 * * * * * * 4272 0 0 D 13 2845 * 1201 2292 * * 4757 * 5229 5256 * 3970 4870 * * 4887 * * * * 13 0 * * * * * * 4447 0 0 Q 14 * * 4289 4183 * 5958 5444 * 2596 3309 5712 * 5255 1372 4795 3611 4683 * * * 14 50 * 4887 * * * * 4447 0 0 K 15 2752 * * 3051 * * 5102 * 1810 2882 * * * 2841 3573 4774 * 5593 * * 15 39 * 5230 * * 0 * 4425 0 1000 E 16 2536 * 4467 1457 3417 * 6221 5202 4019 * * 3695 * 3418 4280 * * * * * 16 0 * * * * * 0 4429 0 1000 E 17 3295 * 5225 750 * * * * 3084 * * 4551 * 3857 * 4412 * * * * 17 35 5364 * 1585 585 0 * 4287 1000 1000 E 18 * * 3651 1144 * 4213 4572 * 3304 * * 5491 6230 3681 3567 4356 5375 * * * 18 0 * * * * * * 4290 0 0 L 19 5555 * * * 5202 * * 3548 4445 1879 1372 6298 * 4625 3861 * * 4647 * * 19 0 * * * * * * 4319 0 0 L 20 4553 * 3795 2263 * * 4550 6625 2681 4873 5386 4872 * 2446 3154 * 3641 * * * 20 17 6413 * 2322 322 * * 4355 1000 0 L 21 4634 * * * * * * 3182 4123 3436 3906 * * 4034 4683 * 5987 951 * * 21 59 4634 * 2585 263 * * 4352 1000 0 F 22 4683 5984 * * 2030 * * 4560 * 3978 * * * * * * * 3833 * 931 22 0 * * * * * * 4352 0 0 W 23 * * * 2337 * * * * 5846 3226 * * * 5154 * * 5206 * 684 * 23 14 * 6659 * * * * 4363 0 0 T 24 4496 * 5130 * 5283 4637 * 4635 3694 * * * 2428 2368 5491 1833 4458 5990 * * 24 0 * * * * * 0 4366 0 1000 Y 25 * * * * 1382 * * 5130 * * * * * * * * * * * 767 25 0 * * * * * 0 4366 0 1000 I 26 * * * * * * * 440 * 4789 * * * * * * 3636 2776 * * 26 0 * * * * * 0 4366 0 1000 Q 27 * * * 3738 6259 * 5651 2946 2328 4919 4848 * * 3309 4693 * 4458 1688 * * 27 0 * * * * * 0 4424 0 1000 A 28 3572 * 4883 * * 546 * * * * * 3922 * * * 3464 4625 * * * 28 0 * * * * * 0 4424 0 1000 M 29 * * * * 3758 * * 3748 * * 232 * * * * * * * * * 29 0 * * * * * 0 4424 0 1000 L 30 * * * * * * * 3305 * 192 * * * * * * * 5399 * * 30 0 * * * * * 0 4424 0 1000 T 31 3758 * * 3984 * * * 4427 5292 4883 6000 * * 4625 6744 4550 624 * * * 31 35 5399 * 0 * * 0 4424 1000 1000 N 32 * * * * * * * * * * * 35 * * * 5384 * * * * 32 58 4673 * 0 * * 0 4424 1294 1000 L 33 3582 * * * 2312 * 4693 4305 * 1282 * * * 2880 5651 4832 * * * 5399 33 57 4693 * 1585 585 * 0 4424 1000 1000 E 34 5375 * 3201 3916 * 966 * * 5471 * * * 3402 5292 * 3238 4625 * * * 34 75 4305 * 0 * * 0 4424 1447 1000 S 35 2813 * * 4693 * 5399 * * * * * 4522 3938 4659 * 1093 2814 * * 4800 35 28 5681 * 0 * * 0 4424 1000 1000 L 36 * * * * * * * 4625 * 956 1580 * * * * 5951 5698 3758 * * 36 0 * * * * * 0 4424 0 1000 S 37 4045 * * 4135 * 5681 * * 2219 * * 3908 1070 * * 3250 * * * * 37 0 * * * * * 0 4424 0 1000 L 38 2996 * * * 3710 * * 3155 * 758 * * 6235 * * * 5260 4179 * * 38 0 * * * * * 0 4424 0 1000 D 39 3500 * 1771 1539 * 4675 5560 5651 4643 * * 5243 4759 3804 * 5698 * * * * 39 0 * * * * * 0 4424 0 1000 R 40 * * * 5384 * * * * 2919 * * * * 2752 571 * 5496 * * * 40 0 * * * * * 0 4424 0 1000 I 41 * * * * * * * 528 * 3429 2492 * * * * * * 4800 * * 41 0 * * * * * 0 4424 0 1000 Y 42 3195 5480 * * * * 695 4770 3710 5117 * 5399 * 5056 * 6081 * 5611 * 5655 42 0 * * * * * 0 4424 0 1000 N 43 4883 * * * * * 5399 * 5292 * 2252 2269 * 3697 4693 2215 2651 6744 * * 43 0 * * * * * 0 4424 0 1000 M 44 * * * * 3182 * * 4079 * 3180 721 5496 * * * 5480 5033 4693 * * 44 0 * * * * * 0 4424 0 1000 L 45 * * * * 4827 * * * * 335 2907 * * * * * * * * 4693 45 0 * * * * * 0 4424 0 1000 R 46 5194 * * * * 6000 * * 737 * * 4625 * 4883 2389 4854 4131 * * * 46 44 * 5056 * * 0 * 4424 0 1000 M 47 * * * * * * * 3581 * 2609 723 * * * * 4266 4375 4419 * * 47 26 * 5823 * * 0 * 4391 0 1000 F 48 3389 * * * 747 * * * * 3065 3328 * * * * * 3718 6193 * * 48 94 * 3994 * * 0 * 4424 0 1000 V 49 1606 4716 * * * * * 2928 * * 4279 * * * * * 4787 1271 * * 49 44 * 5052 * * * 0 4284 0 1741 V 50 3754 * * * 5820 * * 5028 * 3765 5925 * 1327 4004 5121 3681 3557 2890 * * 50 107 * 3804 * * 1700 531 4292 0 2252 T 51 4618 * 3124 4367 * 1746 4951 * 2307 * * 5030 3568 3669 5831 5104 5425 * * * 51 118 * 3668 * * 558 1640 4336 0 2369 G 52 * * 2116 3645 * 1336 * * 5693 * * 5221 3855 * * 2490 * * * * 52 197 4703 3487 0 * * 0 4284 1000 2283 P 53 3997 6188 4413 4060 1864 * * 5769 4459 4254 * 4835 2820 * * 3946 2662 * 5243 * 53 67 4459 * 0 * 555 1646 4207 1000 2833 A 54 5599 * 4772 5393 * 3558 4209 5760 * * * 3485 1272 5210 5295 3113 3895 5456 * * 54 166 * 3198 * * 942 1061 4272 0 1701 L 55 4672 * * * 2536 3194 * 4835 * 4345 * 5668 3474 4172 4295 3400 5842 4331 3265 3147 55 124 * 3597 * * 259 2608 4330 0 2628 A 56 3234 * * * 5128 3058 4717 * * 4927 5149 5456 * * * 2475 4235 4459 * 1536 56 28 * 5701 * * 687 1401 4418 0 2024 E 57 * * 2101 2761 * 3390 5002 * * * 5750 2225 * 5247 4748 4917 2611 * * * 57 238 * 2718 * * 1700 531 4365 0 1393 I 58 2940 3669 * * 3513 * * 2870 2299 5202 * * 3557 * 3334 5278 5766 3210 * * 58 63 * 4555 * * 3393 144 4312 0 1954 D 59 * * 3917 5066 * 5483 * * * * * 3011 * 5738 * 1881 1098 * * * 59 27 * 5738 * * 3594 125 4235 0 2069 L 60 5048 * 4589 3783 * * * 3217 5970 1527 * * 2735 3050 5776 3845 * 5242 * * 60 0 * * * * 203 2928 4276 0 2250 Q 61 4886 * 2943 1649 * * 5443 * 3951 * * * 5269 2740 5478 2591 3929 * * * 61 0 * * * * 0 * 4339 0 1000 E 62 * * 4042 1128 * 5269 4690 * 4819 4642 * * * 1550 * * * * * * 62 0 * * * * * * 4375 0 0 L 63 * * * * * * * * * 209 * * * * * * * 2893 * * 63 0 * * * * * * 4375 0 0 Q 64 5860 * * 2441 * 3985 * * 2502 5695 * * * 2226 2525 3136 * 4697 * * 64 0 * * * * * * 4375 0 0 G 65 2301 * 3600 2210 * 3481 6385 * * 3735 5495 6120 * 4068 5082 3373 5072 3838 * * 65 0 * * * * * * 4375 0 0 Y 66 * * * * 615 * * 4647 * 5284 * * * * * * * 4536 5695 2189 66 0 * * * * * * 4375 0 0 L 67 * * * * * * * * * 65 4501 * * * * * * * * * 67 0 * * * * * * 4375 0 0 Q 68 2663 6104 2139 5072 * 3157 4767 * * 5445 * 3233 * 2283 * 3779 6105 * * * 68 0 * * * * * * 4375 0 0 K 69 3613 * * 2394 * 3559 * 5201 3050 4864 * 5513 * 3753 2796 3229 4178 5414 4819 * 69 0 * * * * * * 4375 0 0 K 70 5072 5714 * * * * * * 1356 1212 2956 * * * * * * * * * 70 0 * * * * * * 4375 0 0 V 71 5545 4662 * 5085 * * * 2786 * * 6254 * * * 5068 * * 471 * * 71 0 * * * * * * 4363 0 0 R 72 2231 * 3228 2473 * 6093 * * 2810 * * 3939 * 4383 2547 4091 * * * * 72 0 * * * * * * 4363 0 0 D 73 * * 3338 776 * 4546 * * 4834 3676 * 6093 * 3642 5408 6020 5195 * * * 73 0 * * * * * * 4363 0 0 Q 74 * * 4287 1847 * 1381 3682 * * * * 3671 * 4123 * 3775 * * * * 74 0 * * * * * * 4363 0 0 Q 75 6002 * * 3668 * * * * 1184 2667 * * * 3362 3247 * * 3246 * * 75 0 * * * * * * 4363 0 0 L 76 * * * * * * * 3981 * 318 4270 * * * * * * 3594 * * 76 50 4876 * 0 * * * 4363 1000 0 V 77 3699 * 5633 1268 * 6174 * 3829 5545 5232 * 5068 * * * 3487 3708 2644 * * 77 130 3538 * 0 * * * 4363 1656 0 Y 78 4876 2340 * * 2502 * 5485 3920 4009 2829 5430 * * * * * * 2518 * 3280 78 94 3987 * 0 * * * 4363 1893 0 S 79 4896 * 3628 5158 * 5495 * 4674 5068 * * 3898 * 4629 4776 2085 2786 2049 * * 79 125 3589 * 0 * * * 4363 2015 0 A 80 5670 * 3241 * * 896 * * * * * 1800 * 4808 * 6113 * * * * 80 0 * * * * * * 4363 0 0 G 81 5633 * 3303 * * 379 * * * * * 4785 * 4808 * 5430 6093 * * * 81 0 * * * * * * 4363 0 0 V 82 3426 * 5431 4279 * * * * 2480 3544 3017 3667 * 4115 4476 2664 5752 3540 * * 82 0 * * * * * * 4312 0 0 Y 83 * * * * 2970 * * * * * * * * * * * * * 5014 249 83 0 * * * * * * 4312 0 0 R 84 4402 * * 5482 5407 * * * 821 6147 * * * 4145 2140 4533 * * * * 84 0 * * * * * * 4318 0 0 L 85 * * * * * * * 2430 5227 424 * * * * * * * 4564 * * 85 0 * * * * * * 4306 0 0 P 86 3445 * * * 5097 * * * 1784 5470 * 3889 1926 * * * * 2087 * * 86 0 * * * * * * 4164 0 0 K 87 * * * * * * * * 366 * * * * 3518 2869 * * * * * 87 0 * * * * * * 4119 0 0 N 88 * * 2576 * * * * * 3004 * * 976 * * * * 2328 * * * 88 538 1683 * 1585 585 * * 2942 1000 0 C 89 * 619 * * * * * * * * * * * * 1520 * * * * * 89 0 * * * * * * 1858 0 0 S 90 * * * * * * * * * * * * * * * 0 * * * * 90 0 * * 0 * * * 1858 0 0 //