HHsearch 1.5 NAME c6neqi_ FAM FILE c6neqi_ COM /bmm/www/servers/phyre2/HH/hhmake -i c6neqi_.a3m DATE Sat Mar 2 08:25:23 2019 LENG 98 match states, 98 columns in multiple alignment FILT 11 out of 15 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.6 EVD 0.4481 1.2183 SEQ >ss_dssp CCHHHHHHHHHHHHHHTCCCSCCCTTTHHHHHHHHSCCTTTSTTTTTTSCCTHHHHHHHHHHHHHTSCCCSSHHHHHHHHHHHHHHTCCCCCSSSSCC >sa_dssp EEEEDEDDECDDAEEEEEEDEEDEEEDDEEEEEEEDEDEDEDEDDEEEEDEEEEEEDECCECCEEEEDECEECDEDDDDCEEDDEEEEEEEEEDEDEE >ss_pred CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >ss_conf 96799999999888764533667887899999998681102754401047979999999999874052034589999999999962468888576799 >Consensus xtxyaxrMxrLsxrIFgevxxptdsKSxKVVxxfsxxPlxkxxxxxxyYPxxxxxxxLmxxLRxxGLyrDeHxDFkdExxxlrxlRGKvxpkkGegkR >c6neqi_ LSEYALRMSRLSARLFSEVARPTDSKSMKVVKLFSEQPLAKRKETYDWYPNHNTYFALMGILRSVGLYRDEHQDFKDEQLRLKKLRGKVKPRKGEGKR >UniRef50_Q2F5Y5(16-104:118) Ribosomal protein S33 n=9 Tax=Neoptera RepID=Q2F5Y5_BOMMO E=4e-20 s/c=1.11 id=56% cov=92% -TTYARRMKRLSNSIFGEVALPTNSKSMKVVKIFSARPLHTNEEIMHYYPSHMETHKLMMNLSDYGLFRDEHQDFKEEMKSLRELRGKVK-------- >UniRef50_C1BMR6(18-109:114) Mitochondrial 28S ribosomal protein S33 n=3 Tax=Caligidae RepID=C1BMR6_9MAXI E=1e-17 s/c=0.99 id=48% cov=95% -TDYAKRMRHLKYSIFGEVRRDTSEKSREVVAMFSRNPYDQRREIVEYYPAHEETSKLMKLLRDYGLYRDEHEDFKEEMARLRALRGKVRFRR----- >UniRef50_C4Q810(3-97:102) Mitochondrial ribosomal protein S33, putative n=1 Tax=Schistosoma mansoni RepID=C4Q810_SCHMA E=1e-15 s/c=0.88 id=47% cov=96% ---YAKKMTMLAGRIFRDVGKQVDSKSMKVVRIMSELP--RPMILKDYYPPLEEYNNILQKLRYLGLFRNEHADFREEMARLRQLRGKGKRKKGESKR >UniRef50_A7SQA5(3-92:100) Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SQA5_NEMVE E=6e-11 s/c=0.76 id=42% cov=93% -TNYARKMALLQARIFGKLTRPVTKQSYKVVTHFSRRPLGGAINSY--YPPLKQFNSLLLRLRHLGFYRDDHLDFKEEMAVRRKERGKGPPKK----- >UniRef50_Q19685(21-119:126) Protein F21D5.8, partially confirmed by transcript evidence n=3 Tax=root RepID=Q19685_CAEEL E=7e-26 s/c=1.19 id=44% cov=100% -TPFGKRMDRLSNRVWGEVVMPTDTKSLKVVRVMSAEPYeTKEQLSPKYYPNLPMFHYLTKMLRFHGLFFDDHVVFRDVQDNLKIIRGKvVRPPIGQGKR >UniRef50_Q9Y291(4-89:106) 28S ribosomal protein S33, mitochondrial n=17 Tax=Bilateria RepID=RT33_HUMAN E=7e-24 s/c=1.29 id=82% cov=89% LSEYAFRMSRLSARLFGEVTRPTNSKSMKVVKLFSELPLAKKKETYDWYPNHHTYAELMQTLRFLGLYRDEHQDFMDEQKRLKKLR------------ >UniRef50_B3RNX2(3-97:102) Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RNX2_TRIAD E=2e-22 s/c=1.12 id=42% cov=98% -SGHVRNISRLRAKIFGRLPFKTDPKSYKVVKAFRQQP--KGPQIVEYTQPIQRFNSLLLRLRHMGLYTDEHLDFIDENEQKRRLKGKVPPKKGQGRR >UniRef50_UPI0000E4A035(1-71:76) PREDICTED: similar to LOC495310 protein n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E4A035 E=2e-12 s/c=1.04 id=56% cov=73% ---------------------------MKVVEMMREEPRQMRKHIVDYYPPHMQSFKLMGYLRYIGLYRDEHADFRDEMKRVQKMKGKAPPKKGEGKR >UniRef50_Q4SRI4(4-47:81) Chromosome undetermined SCAF14526, whole genome shotgun sequence n=1 Tax=Tetraodon nigroviridis RepID=Q4SRI4_TETNG E=0.0002 s/c=1.07 id=67% cov=46% LSSYAVRMARLSAQIFGEVVNPADSRSLKVVQLFQELPLAKRKE------------------------------------------------------ # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * L 1 * * * * * * * * * 0 * * * * * * * * * * 1 0 * * * * * * 1306 0 0 S 2 * * * * * * * * * * * * * * * 1096 910 * * * 2 0 * * * * * * 2569 0 0 E 3 * * 2797 2219 * 2723 * * * * * 2793 2754 * * 3300 3383 * * * 3 0 * * * * * * 2569 0 0 Y 4 * * * * 2800 * 2751 * * * * * * * * * * * * 498 4 0 * * * * * * 2614 0 0 A 5 498 * * * * 2800 * * * * * * * * * * * 2751 * * 5 0 * * * * * * 2614 0 0 L 6 * * * * 3740 * * * 1434 2800 * * * * 1458 * * 4400 * * 6 0 * * * * * * 2614 0 0 R 7 * * * * * * * * 2109 * * 2751 * * 690 * * * * * 7 0 * * * * * * 2614 0 0 M 8 * * * * * * * 2751 * * 232 * * * * * * * * * 8 0 * * * * * * 2614 0 0 S 9 2603 * 2800 * * * * * 3348 * * * * * 3157 1446 3126 * * * 9 0 * * * * * * 2614 0 0 R 10 * * * * * * 3157 * * 3092 3126 * * * 608 * * * * * 10 0 * * * * * * 2614 0 0 L 11 * * * * * * * * * 0 * * * * * * * * * * 11 0 * * * * * * 2614 0 0 S 12 3126 * * * * * * * 3157 * * * * 3092 2751 978 * * * * 12 0 * * * * * * 2614 0 0 A 13 912 * * * * 3126 * * * * * 2048 * * * * * * * 3157 13 0 * * * * * * 2614 0 0 R 14 * * * * * * * * 2751 * * * * 4400 752 2249 * * * * 14 0 * * * * * * 2614 0 0 L 15 * * * * * * * 500 * 2744 * * * * * * * 2800 * * 15 0 * * * * * * 2614 0 0 F 16 * * * * 224 * * * * * * * * * * * * * 2800 * 16 0 * * * * * * 2614 0 0 S 17 * * * * * 302 * * * * * * * * 3126 3747 * * * * 17 0 * * * * * * 2614 0 0 E 18 * * 3126 690 * * * * 3092 * * * * * 2751 * * * * * 18 0 * * * * * * 2614 0 0 V 19 * * * * * * * * * 1912 * * * * * * * 446 * * 19 0 * * * * * * 2614 0 0 A 20 2048 * * * * 3126 * * * * * * 2751 * 3157 * 2380 2389 * * 20 0 * * * * * * 2614 0 0 R 21 * * * * 2751 * * * 3126 3348 2800 4400 * * 1159 * * * * * 21 0 * * * * * * 2614 0 0 P 22 * * 3157 * * * * * 2751 * * * 848 3126 * 3854 * * * * 22 0 * * * * * * 2614 0 0 T 23 4400 * * * * * * * * * * * * * * * 472 2109 * * 23 0 * * * * * * 2614 0 0 D 24 * * 743 * * * * * * * * 2531 * * * 3157 3092 * * * 24 0 * * * * * * 2614 0 0 S 25 * * * 3157 * * * * 3092 * * * 2751 * * 1063 2800 * * * 25 0 * * * * * * 2614 0 0 K 26 * * * * * * * * 260 * * * * 3092 4400 * * * * * 26 0 * * * * * * 2614 0 0 S 27 * * * * * * * * * * * * * * * 0 * * * * 27 0 * * * * * * 2614 0 0 M 28 * * * * * * * * * 2485 1085 * * * 3278 * * * * 2018 28 0 * * * * * * 2647 0 0 K 29 * * * 3278 * * * * 157 * * * * * * * * * * * 29 0 * * * * * * 2647 0 0 V 30 * * * * * * * * * * * * * * * * * 0 * * 30 0 * * * * * * 2647 0 0 V 31 * * * * * * * * * * * * * * * * * 0 * * 31 0 * * * * * * 2647 0 0 K 32 3278 * * 3800 * * * * 1449 * * * * 4506 2040 3985 3203 * * * 32 0 * * * * * * 2647 0 0 L 33 2855 * * * * * 3203 2331 * 2030 2516 * * * * * * 2893 * * 33 0 * * * * * * 2647 0 0 F 34 * * * * 546 * * * * * 1667 * * * * * * * * * 34 0 * * * * * * 2647 0 0 S 35 * * * * * * * * * * * * * 4506 2251 423 * * * * 35 0 * * * * * * 2647 0 0 E 36 2152 * * 1234 * * * * * * * * * 2855 2240 * * * * * 36 0 * * * * * * 2647 0 0 Q 37 * * * 2276 * * * * * 2171 * 3278 * 1891 2330 * * * * * 37 0 * * * * * * 2647 0 0 P 38 * * * * * * * * * * * * 0 * * * * * * * 38 409 * 2019 * * * * 2647 0 0 L 39 * * * * * * * * * 850 * * * * 2778 * * * * 1740 39 225 2794 * 0 * * 0 2762 1000 1587 A 40 1753 * 2689 * * 2797 3129 * * * * * * 2778 * * 2794 * * * 40 0 * * * * 0 * 2762 0 1587 K 41 * * * * * 3203 * * 950 * 3800 * * 3278 3204 * 3469 * * * 41 0 * * * * * * 2647 0 0 R 42 3203 * * 2893 * 2855 * * 2914 * * 3469 3204 * 1800 * * * * * 42 0 * * * * * * 2647 0 0 K 43 * * * 3469 * * * 3203 1659 * 3204 * 2855 2893 3278 * * * * * 43 0 * * * * * * 2647 0 0 E 44 * * * 1190 * * 3800 3204 * 2893 * 3203 * 2855 * * * * * * 44 0 * * * * * * 2647 0 0 T 45 * * * * * * * 1251 * 3154 * * * * * 1977 2228 * * * 45 0 * * * * * * 2573 0 0 Y 46 * * * * * * * * 3154 * 3407 * 2846 * * * * 1618 * 1607 46 176 * 3121 * * * * 2573 0 0 D 47 * * 1106 1910 * * 3171 * 2658 * * * * * * * * * * * 47 0 * * * * * 0 2595 0 1000 W 48 * * * * * * * * * * * * * * * * * * 2092 386 48 0 * * * * 0 * 2595 0 1000 Y 49 * * * * * * * * * * * * * * * * 2828 * * 219 49 0 * * * * * * 2573 0 0 P 50 * * * * * * * * * * * * 219 2828 * * * * * * 50 0 * * * * * * 2573 0 0 N 51 3225 * * * * * * * * * * 1504 1164 * * 3407 * * * * 51 0 * * * * * * 2573 0 0 H 52 * * * * * * 1021 2828 * 1448 * * * * * * * * * * 52 0 * * * * * * 2573 0 0 N 53 * * * 2189 * * 3819 * 3121 * 2537 2810 2846 2828 * * * * * * 53 0 * * * * * * 2573 0 0 T 54 * * * 1673 * * * * * * 2846 * * 2373 2828 * 2228 * * * 54 0 * * * * * * 2573 0 0 Y 55 * * * * 1340 * * * * * * * * * * 3679 2313 * * 1618 55 0 * * * * * * 2573 0 0 F 56 3819 * * * 2180 * 2099 * * * * 1441 * * * 3225 * * * * 56 0 * * * * * * 2573 0 0 A 57 2810 * * 3819 * * * * 1840 * * 3154 * * * 1967 * * * 2846 57 0 * * * * * * 2573 0 0 L 58 * * * * * * * 3154 * 172 * * * * * * * * * * 58 0 * * * * * * 2573 0 0 M 59 * * * * * * * * * 1441 1021 * * * * * 2846 * * * 59 0 * * * * * * 2573 0 0 G 60 * * * * * 2180 * * 2023 1967 3407 * * 2448 * * * * * * 60 0 * * * * * * 2573 0 0 I 61 * * * * * * * 3769 3154 3225 2846 2613 * * 1967 * 3819 * * 3679 61 0 * * * * * * 2573 0 0 L 62 * * * * * * * * * 0 * * * * * * * * * * 62 0 * * * * * * 2573 0 0 R 63 * * * * * * * * * * * * * * 143 3407 * * * * 63 0 * * * * * * 2573 0 0 S 64 * * 2313 * 1841 * 1967 * * * * * * * * 3769 * * * 2392 64 0 * * * * * * 2573 0 0 V 65 * * * * * * 2846 3679 * 1445 2828 * * * * * * 3769 * 2313 65 0 * * * * * * 2573 0 0 G 66 * * * * * 0 * * * * * * * * * * * * * * 66 0 * * * * * * 2573 0 0 L 67 * * * * 3121 * * * * 176 * * * * * * * * * * 67 0 * * * * * * 2573 0 0 Y 68 * * * * 1532 * * * * * * * * * * * * * * 612 68 0 * * * * * * 2573 0 0 R 69 * * * * 2846 * * * * * * * * * 474 * 2828 * * * 69 0 * * * * * * 2573 0 0 D 70 * * 172 * * * * * * * * 3154 * * * * * * * * 70 0 * * * * * * 2573 0 0 E 71 * * 1977 423 * * * * * * * * * * * * * * * * 71 0 * * * * * * 2573 0 0 H 72 * * * * * * 0 * * * * * * * * * * * * * 72 0 * * * * * * 2573 0 0 Q 73 2392 * * 3225 * * * * * 1967 * * * 1701 * * * 2846 * * 73 0 * * * * * * 2573 0 0 D 74 * * 216 * * * * * * * * * * * * * * 2846 * * 74 0 * * * * * * 2573 0 0 F 75 * * * * 0 * * * * * * * * * * * * * * * 75 0 * * * * * * 2573 0 0 K 76 * * * * * * * 2828 1124 * 3819 * * * 1601 * * * * * 76 0 * * * * * * 2573 0 0 D 77 * * 807 1222 * * * * * * * * * * * * * * * * 77 0 * * * * * * 2573 0 0 E 78 * * * 216 * * * * * * * * * * * * * 2846 * * 78 0 * * * * * * 2573 0 0 Q 79 * * * * * * * * * * 981 2828 * 1504 * * * * * * 79 0 * * * * * * 2573 0 0 L 80 1581 * 2846 2828 * * * * 2040 3769 * * * * 3853 * * * * * 80 0 * * * * * * 2573 0 0 R 81 * * * * * * * * * * * 2846 * 2828 969 3407 * 3121 * * 81 0 * * * * * * 2573 0 0 L 82 * * * * * * * * 2828 586 * * * * 3121 * * 3679 * * 82 0 * * * * * * 2573 0 0 K 83 * * * * * * * * 1504 * * * * 3679 813 * * * * * 83 0 * * * * * * 2573 0 0 K 84 3225 * * 3407 * * * 2846 1299 * * * * 3154 2828 * * * * * 84 0 * * * * * * 2573 0 0 L 85 * * * 3121 * * * 2846 * 582 3679 * * * * * * * * * 85 0 * * * * * * 2573 0 0 R 86 * * * * * * * * 2191 * * * * * 356 * * * * * 86 0 * * * * * * 2573 0 0 G 87 * * * * * 0 * * * * * * * * * * * * * * 87 0 * * * * * * 2595 0 0 K 88 * * * * * * * * 0 * * * * * * * * * * * 88 228 2774 * 0 * * * 2595 1000 0 V 89 3135 * * * * 1708 * * * * * * * * * * * 786 * * 89 0 * * * * * * 2595 0 0 K 90 * * * * * * * * 1373 * * * 1477 * 1974 * * * * * 90 0 * * * * * * 2595 0 0 P 91 * * * * 2905 * * * * * * * 436 * 2973 * * * * * 91 0 * * * * * * 2524 0 0 R 92 * * * * * * * * 968 * * * 2594 * 1631 * * * * * 92 0 * * * * * * 2524 0 0 K 93 * * * * * * * 2594 513 * * * * * 2905 * * * * * 93 0 * * * * * * 2524 0 0 G 94 * * * * * 0 * * * * * * * * * * * * * * 94 0 * * * * * * 2223 0 0 E 95 * * * 747 * * * * * * * * * 1307 * * * * * * 95 0 * * * * * * 2223 0 0 G 96 * * * * * 281 * * * * * * * * * 2498 * * * * 96 0 * * * * * * 2223 0 0 K 97 * * * * * * * * 311 * * * * * 2368 * * * * * 97 0 * * * * * * 2223 0 0 R 98 * * * * * * * * * * * * * * 0 * * * * * 98 0 * * 0 * * * 2223 0 0 //