HHsearch 1.5
NAME  c6lphB_
FAM   
FILE  c6lphB_
COM   /bmm/www/servers/phyre2/HH/hhmake -i c6lphB_.a3m 
DATE  Sat Jan 16 08:36:30 2021
LENG  28 match states, 28 columns in multiple alignment
FILT  2 out of 6 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100)
NEFF  1.1 
EVD   0.5216  4.1829 
SEQ
>ss_dssp
CCCCCCCCCCCBTTBTTCCCCCHHHHCC
>sa_dssp
EEEDEEEEDEECEEDEEDEEDEEEEDEE
>ss_pred
CCCCCCCCEEEEECCCCEEEEECCCCCC
>ss_conf
9861135168993885153130145649
>Consensus
aapxinsxtcfvsgnsnmilnhxndnfa
>c6lphB_
AAPVINSHTCFVSGNSNMILNHMNDNFA
>UniRef50_B4H7F9(300-324:740) GL26989 n=1 Tax=Drosophila persimilis RepID=B4H7F9_DROPE   E=2e-07 s/c=2.26 id=81% cov=93%
--PLVNSQTCFVSGNSNMILNHLNDNF-
#
NULL   3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	
HMM    A	C	D	E	F	G	H	I	K	L	M	N	P	Q	R	S	T	V	W	Y	
       M->M	M->I	M->D	I->M	I->I	D->M	D->D	Neff	Neff_I	Neff_D
       0	*	*	0	*	0	*	*	*	*	
A 1    0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	1
       0	*	*	*	*	*	*	1000	0	0	

A 2    0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	2
       0	*	*	*	*	*	*	1000	0	0	

P 3    *	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	3
       0	*	*	*	*	*	*	1117	0	0	

V 4    *	*	*	*	*	*	*	*	*	1000	*	*	*	*	*	*	*	1000	*	*	4
       0	*	*	*	*	*	*	1117	0	0	

I 5    *	*	*	*	*	*	*	1000	*	*	*	*	*	*	*	*	*	1000	*	*	5
       0	*	*	*	*	*	*	1117	0	0	

N 6    *	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	6
       0	*	*	*	*	*	*	1117	0	0	

S 7    *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	7
       0	*	*	*	*	*	*	1117	0	0	

H 8    *	*	*	*	*	*	1000	*	*	*	*	*	*	1000	*	*	*	*	*	*	8
       0	*	*	*	*	*	*	1117	0	0	

T 9    *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	9
       0	*	*	*	*	*	*	1117	0	0	

C 10   *	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	10
       0	*	*	*	*	*	*	1117	0	0	

F 11   *	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	11
       0	*	*	*	*	*	*	1117	0	0	

V 12   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	12
       0	*	*	*	*	*	*	1117	0	0	

S 13   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	13
       0	*	*	*	*	*	*	1117	0	0	

G 14   *	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	14
       0	*	*	*	*	*	*	1117	0	0	

N 15   *	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	15
       0	*	*	*	*	*	*	1117	0	0	

S 16   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	16
       0	*	*	*	*	*	*	1117	0	0	

N 17   *	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	17
       0	*	*	*	*	*	*	1117	0	0	

M 18   *	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	18
       0	*	*	*	*	*	*	1117	0	0	

I 19   *	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	19
       0	*	*	*	*	*	*	1117	0	0	

L 20   *	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	20
       0	*	*	*	*	*	*	1117	0	0	

N 21   *	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	21
       0	*	*	*	*	*	*	1117	0	0	

H 22   *	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	22
       0	*	*	*	*	*	*	1117	0	0	

M 23   *	*	*	*	*	*	*	*	*	1000	1000	*	*	*	*	*	*	*	*	*	23
       0	*	*	*	*	*	*	1117	0	0	

N 24   *	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	24
       0	*	*	*	*	*	*	1117	0	0	

D 25   *	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	25
       0	*	*	*	*	*	*	1117	0	0	

N 26   *	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	26
       0	*	*	*	*	*	*	1117	0	0	

F 27   *	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	27
       0	*	*	*	*	*	*	1117	0	0	

A 28   0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	28
       0	*	*	0	*	*	*	1000	0	0	

//