HHsearch 1.5 NAME c6jpdB_ FAM FILE c6jpdB_ COM /bmm/www/servers/phyre2/HH/hhmake -i c6jpdB_.a3m DATE Sat Oct 31 08:32:53 2020 LENG 26 match states, 26 columns in multiple alignment FILT 1 out of 5 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 1.0 EVD 0.5548 5.0041 SEQ >ss_dssp CCCCSSSCCCCTTCCCCCCCC----- >sa_dssp EEDEEEEEEDCEEEEEEEEEE----- >ss_pred CCCCCCEEEECCCCCCCCCCCCCCCC >ss_conf 96762104645714401576211479 >Consensus vfnncsevqignynslvapprxxxxx >c6jpdB_ VFNNCSEVQIGNYNSLVAPPRXXXXX # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * V 1 * * * * * * * * * * * * * * * * * 0 * * 1 0 * * * * * * 1000 0 0 F 2 * * * * 0 * * * * * * * * * * * * * * * 2 0 * * * * * * 1000 0 0 N 3 * * * * * * * * * * * 0 * * * * * * * * 3 0 * * * * * * 1000 0 0 N 4 * * * * * * * * * * * 0 * * * * * * * * 4 0 * * * * * * 1000 0 0 C 5 * 0 * * * * * * * * * * * * * * * * * * 5 0 * * * * * * 1000 0 0 S 6 * * * * * * * * * * * * * * * 0 * * * * 6 0 * * * * * * 1000 0 0 E 7 * * * 0 * * * * * * * * * * * * * * * * 7 0 * * * * * * 1000 0 0 V 8 * * * * * * * * * * * * * * * * * 0 * * 8 0 * * * * * * 1000 0 0 Q 9 * * * * * * * * * * * * * 0 * * * * * * 9 0 * * * * * * 1000 0 0 I 10 * * * * * * * 0 * * * * * * * * * * * * 10 0 * * * * * * 1000 0 0 G 11 * * * * * 0 * * * * * * * * * * * * * * 11 0 * * * * * * 1000 0 0 N 12 * * * * * * * * * * * 0 * * * * * * * * 12 0 * * * * * * 1000 0 0 Y 13 * * * * * * * * * * * * * * * * * * * 0 13 0 * * * * * * 1000 0 0 N 14 * * * * * * * * * * * 0 * * * * * * * * 14 0 * * * * * * 1000 0 0 S 15 * * * * * * * * * * * * * * * 0 * * * * 15 0 * * * * * * 1000 0 0 L 16 * * * * * * * * * 0 * * * * * * * * * * 16 0 * * * * * * 1000 0 0 V 17 * * * * * * * * * * * * * * * * * 0 * * 17 0 * * * * * * 1000 0 0 A 18 0 * * * * * * * * * * * * * * * * * * * 18 0 * * * * * * 1000 0 0 P 19 * * * * * * * * * * * * 0 * * * * * * * 19 0 * * * * * * 1000 0 0 P 20 * * * * * * * * * * * * 0 * * * * * * * 20 0 * * * * * * 1000 0 0 R 21 * * * * * * * * * * * * * * 0 * * * * * 21 0 * * * * * * 1000 0 0 X 22 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 22 * * * * * * * 1000 0 0 X 23 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 23 * * * * * * * 1000 0 0 X 24 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 24 * * * * * * * 1000 0 0 X 25 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 25 * * * * * * * 1000 0 0 X 26 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 26 0 * * 0 * * * 1000 0 0 //