HHsearch 1.5 NAME c6ivhA_ FAM FILE c6ivhA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c6ivhA_.a3m DATE Sat Jan 25 08:14:33 2020 LENG 94 match states, 94 columns in multiple alignment FILT 114 out of 253 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.7 EVD 0.4563 0.9096 SEQ >ss_dssp CCCBCHHHHHHHHHHTTSSCSSSEEHHHHHHHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHCCCCSCCCSEECHHHHHHHHHHHHHHC >sa_dssp EEDCDACDABDCACEEEECDDEEBBACDAADCACDCBEDBDEEEDECBEDADDABEBADDBCDBAEEDEEEDECDCEBCCEEACECACECBEEE >ss_pred CCCCCHHHHHHHHHHCCCCCHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC >ss_conf 9742689999999840476713530999999999999852004766789899999999986676408988102354322488999999997509 >Consensus exxxxPlDLLlxLixxxkiDixdIxIxxitdqylxxixxxxxxdLxxxsefLxmAaxLlxlKSxxLLPxxxxxxexexxxedxxxxLxxxlxEx >c6ivhA_ EEEITPVDILLQLVQXGKVDPWNIDIVDLTEKYIERLREXKELDLRVSARAILAASILVRXKSEALLYAPLRRVERYYTFDDLLDALXDALEEA >UniRef50_B3TAJ5(46-124:333) Putative uncharacterized ACR, COG1354 n=1 Tax=uncultured marine microorganism HF4000_APKG8D23 RepID=B3TAJ5_9ZZZZ E=8e-13 s/c=0.95 id=30% cov=81% ---IDPFDrsvaLVFQLFQSSDLDPWDVDLSSFLEMFNERIKESENIDLPTCGRLIRMAWSILRGQA----FTLMERQERAFGYEE------------ >UniRef50_UPI0001C31CE0(16-102:256) chromosome segregation and condensation protein ScpA n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31CE0 E=0.0005 s/c=0.52 id=27% cov=94% -----PFDLLLTLVLREEVDLLEVDLADVVLTYIDFLEARGELDLELATEFLVLIAALLELKSRLMLPGEEDELVDLQPGEAAEELLARLLE-- >UniRef50_Q0C0J8(31-121:277) Segregation and condensation protein A n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C0J8_HYPNA E=2e-13 s/c=0.84 id=27% cov=94% -----PLHLLLELARRQKVNLLQISMLRLAEQYLSFVEDARTKRIDIAADYLLMASWLAFMKSRLLLPKPEAIEEDEPTGEEMAARLAFRLK-- >UniRef50_A5G3R4(23-115:273) Condensin subunit ScpA n=5 Tax=Desulfuromonadales RepID=A5G3R4_GEOUR E=2e-22 s/c=1.14 id=29% cov=100% EEFEGPLDLLLHLIKKNEVDIYNIPIAAITRQYLDYIDLMKDLNLDIAGEFLVMAATLIQIKSKMLLPPSVEEEAEEEEEEDPRAELVRRLLE- >UniRef50_C1TRI6(7-92:247) Uncharacterized conserved protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TRI6_9BACT E=4e-11 s/c=0.80 id=15% cov=86% -----PLDLLCHMVESREIEASSVSVAEVVRIYGVYHAQKGEVPIEAVAHFLVQAARLILDKALALMPQKVTDNTDEVWDQEFVE--------- >UniRef50_Q2JSE5(7-90:251) Segregation and condensation protein A n=2 Tax=Synechococcus RepID=Q2JSE5_SYNJA E=7e-06 s/c=0.62 id=25% cov=76% ------IALLIDLAERGEINPWDVQVIDVIDRFLARMApTASSHDLSESGQAFLHAAMLVYLKA-MALSKPEDEESEE----------------- >UniRef50_D1CFN2(13-104:240) Chromosome segregation and condensation protein ScpA n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CFN2_THET1 E=1e-11 s/c=0.77 id=28% cov=95% -----PLDLLLQLVERNRLPVTELSLAQVTDDYLERVSHL-DVAPEEMSKFLLIASRLLLIKSRALLEIPTDAEEEGQEDLVSQLALYQSIKRA >UniRef50_D1B9Q6(19-102:253) Chromosome segregation and condensation protein ScpA n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9Q6_THEAS E=2e-09 s/c=0.76 id=32% cov=86% -----PLDLLCQLVERGKLDVARISLVELLERYVSHLMTVESVSLRDLAEFFGFVSRIALSKVRSLFPSV-DQEEVFPLEEDTLDA-------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * E 1 * * * 0 * * * * * * * * * * * * * * * * 1 0 * * * * * * 2512 0 0 E 2 * * * 554 * * * * * * * * * * * * 1649 * * * 2 0 * * * * * * 2745 0 0 E 3 * * * 1484 1006 * * * * * * * * * * * * * * 2790 3 0 * * * * * * 2887 0 0 I 4 * * 3313 1023 * * * 1729 * * * 3241 * * * * * * * * 4 0 * * * * * * 3288 0 0 T 5 * * 2955 3342 * 967 2420 * * * * * * * * * 3754 * * * 5 0 * * * * * * 3288 0 0 P 6 * * * * * * * * * * * * 0 * * * * * * * 6 0 * * * * * * 4674 0 0 V 7 * * * * 2386 * * 3649 * 752 4379 * * * * * * 4087 * 5139 7 0 * * * * * * 4810 0 0 D 8 3953 * 506 2700 * 6068 6757 * * * * * * * * 4227 * * * * 8 48 4932 * 2000 415 * * 4824 1000 0 I 9 6342 * * * 4528 * * 3204 * 387 * * * * * * 6238 4664 5778 * 9 0 * * * * * * 4837 0 0 L 10 * * * * 6466 * * 5842 * 189 5225 * * * * * * 3887 * * 10 0 * * * * * * 4844 0 0 L 11 * 3839 * * 3842 * * 3199 * 713 * * * * * * * 3598 5583 4722 11 0 * * * * * * 4844 0 0 Q 12 5180 * 3404 3294 4766 5348 1828 * 5793 * * 4701 5157 3255 6756 3870 4754 6240 * 3111 12 0 * * * * * * 4844 0 0 L 13 * * * * 5832 * * * * 199 3171 * * * * * * * * * 13 0 * * * * * * 4844 0 0 V 14 3052 * * * 4987 * * 1027 * 4785 * * * * * * * 1640 * * 14 0 * * * * * * 4856 0 0 Q 15 4812 * 6082 1802 * 6025 6770 7372 2136 4814 5441 * * 3071 2634 4206 7379 * * 7366 15 0 * * * * * * 4856 0 0 X 16 5744 * 3544 3338 * * * * 1496 * * 4934 * 4331 2257 2970 6908 6102 * * 16 0 * * * * * * 4859 0 0 G 17 4888 * 4731 3130 * 2887 4108 * 2628 * 6372 2469 * 3077 3951 4058 * * * 5408 17 0 * * * * * * 4856 0 0 K 18 * * 4553 1473 * 6535 * * 1270 * * 4073 * 4008 4319 * * * * * 18 0 * * * * * * 4856 0 0 V 19 * * * * 5188 * * 1694 6160 1491 2921 * * * 6082 * * 2767 * * 19 0 * * * * * * 4856 0 0 D 20 6822 * 584 3629 * * * * 6611 * * 3057 5877 * 6130 3816 6563 * * * 20 0 * * * * * * 4856 0 0 P 21 4866 * * * * * * 992 * 2669 * * 2236 * * * * 3419 * * 21 0 * * * * * * 4856 0 0 W 22 4306 7044 6563 5342 3648 6822 4865 6535 5984 3507 5080 5181 * 7000 4667 4744 3392 7353 2236 2225 22 0 * * * * * * 4856 0 0 N 23 4360 * 1185 2366 * 6770 * * 5047 * * 2866 * 4168 6049 4175 6082 * * * 23 0 * * * * * * 4856 0 0 I 24 * * * * * * * 915 * 3100 6663 * * * * * 6559 1588 * * 24 0 * * * * * * 4856 0 0 D 25 4512 * 1932 4825 * * * * 4801 * * 3475 2015 4565 6723 2096 * * * * 25 0 * * * * * * 4856 0 0 I 26 * * * * * * * 947 * 1728 4684 * * * * * * 2831 * * 26 0 * * * * * * 4856 0 0 V 27 1861 * 6831 6074 5822 * 5288 3940 6160 3327 * 5401 * 6611 4612 2059 4034 3276 * * 27 0 * * * * * * 4856 0 0 D 28 5425 * 3180 1417 6495 * 6770 5983 3489 5912 * 5984 5547 2917 3721 4285 5945 4749 * * 28 0 * * * * * * 4856 0 0 L 29 6492 * * * 4196 * * 1401 * 1794 5506 * * * * * * 2028 * * 29 0 * * * * * * 4856 0 0 T 30 2284 * * * 6143 * * 3473 * 3853 * * * * * 6265 1016 3134 * * 30 0 * * * * * * 4856 0 0 E 31 5254 * 1244 2462 * 5794 * * 3960 6493 * 3485 * 4750 3798 4215 5357 * * * 31 0 * * * * * * 4856 0 0 K 32 5833 * 4169 3134 * 6126 5814 5643 5091 3411 4987 * * 1030 3735 6781 5443 * * 6773 32 0 * * * * * * 4856 0 0 Y 33 * * * * 1494 * * * * * * * * * * * * * * 633 33 0 * * * * * * 4856 0 0 I 34 * * * * 5538 4866 6737 2611 * 894 3801 4987 * * * * 5993 3239 * 6925 34 0 * * * * * * 4856 0 0 E 35 2253 * 3366 1895 * 6397 6329 * 4720 7044 * 4183 * 4038 3902 3819 4564 4462 7099 7373 35 0 * * * * * * 4856 0 0 R 36 4958 7216 * 3948 3330 * 3910 5350 4543 5803 * * * 4798 3155 5100 5937 6029 4886 1314 36 0 * * * * * * 4856 0 0 L 37 * * * * 6627 * 5643 1440 * 1730 4406 * * * 5794 * 6711 2152 * * 37 0 * * * * * * 4856 0 0 R 38 3984 * 3130 2250 * 5848 3607 * 2611 * 6048 3075 * 4023 3064 6026 5713 * * * 38 30 6150 7328 0 * * * 4850 1000 0 E 39 3264 * 5230 2536 * 5002 4927 5589 2832 5051 6387 3856 5787 3030 7254 3693 3265 5271 7379 * 39 83 4895 5507 0 * * 0 4855 1918 1000 X 40 3854 5211 * 4878 7413 5347 * 4407 5621 2256 2093 * * 3667 3958 3950 5678 4161 5709 5277 40 31 * 5555 * * 546 1665 4843 0 2034 K 41 5407 * 4247 1984 * 4063 6251 * 2067 6883 * 5519 6105 2708 3685 4512 5134 6440 * * 41 32 5495 * 2454 291 582 1591 4840 1554 1989 E 42 3627 * 2837 2563 * 7508 * 6297 3705 5172 5105 3734 5296 4260 4595 3009 3324 5135 * 6447 42 22 7453 6775 2000 415 * 0 4839 1000 1000 L 43 5358 * 5699 5190 4061 * 4086 3285 4488 1382 3708 * 5223 4835 6968 4732 5183 4057 * 7020 43 29 5656 * 3251 160 0 * 4835 1562 1640 D 44 4927 * 1235 4630 * 7328 4889 6708 4956 * * 1918 5642 5131 4524 4227 * * * 6608 44 0 * * * * * * 4850 0 0 L 45 7212 * 6454 * 4872 * * 2361 * 673 4299 * 4572 * * * 6953 6158 * 6532 45 0 * * * * * * 4850 0 0 R 46 5000 * 1924 1501 * 6659 7061 5432 5339 * * 4538 4550 6374 2967 4684 6454 6544 * * 46 0 * * * * * * 4850 0 0 V 47 5642 * 4252 3318 * * * 2155 5581 2424 6440 5961 * 5196 6488 4393 4127 2206 6999 * 47 0 * * * * * * 4850 0 0 S 48 1423 4986 5791 6532 * 5233 7106 4862 5269 3510 5138 * 4644 * 6079 2822 3248 4186 * * 48 0 * * * * * * 4850 0 0 A 49 1868 * * * * 1787 * * * * * * * * * 1564 3664 5704 * * 49 0 * * * * * * 4850 0 0 R 50 4174 * 2024 1099 * * 5642 * 4952 * * 5147 * 5309 3241 5609 * * * * 50 0 * * * * * * 4850 0 0 A 51 3553 * * * 978 * 6263 5432 * 4986 6332 * * * * * 4498 5904 6079 1993 51 0 * * * * * * 4850 0 0 I 52 6627 * * * 4194 * * 2166 * 671 5336 * * * * * * 4069 * * 52 0 * * * * * * 4850 0 0 L 53 3662 * 5744 4452 4475 4525 5432 4648 * 1932 * 5992 * * 4986 4668 5022 1874 * 4241 53 0 * * * * * * 4850 0 0 A 54 4409 * * 5842 5376 6130 6150 3928 * 3565 1112 * * 5093 * 4701 5036 3611 * 3470 54 0 * * * * * * 4850 0 0 A 55 195 * * * * 5350 * 6487 * 5227 * * * * * 4968 6942 5376 * * 55 0 * * * * * * 4850 0 0 S 56 1162 6270 * * * 6770 * * * * * * * * * 1320 3726 * 4192 * 56 0 * * * * * * 4850 0 0 I 57 5097 * 5998 3748 5181 5842 5025 3275 5936 5674 5472 4458 * 4565 3092 4030 2077 5068 4764 3770 57 0 * * * * * * 4850 0 0 L 58 * * * * 5391 * * 3840 * 159 6585 * * * * * * * * * 58 0 * * * * * * 4850 0 0 V 59 4289 * * * 5983 * 6131 2258 * 1295 3561 * * * * * 4622 2498 * * 59 0 * * * * * * 4850 0 0 R 60 5086 * 4210 1876 5254 * 5070 * 4838 2981 5432 5798 * 3960 2589 5818 6779 6985 5616 3325 60 0 * * * * * * 4850 0 0 X 61 6349 * 5640 * * 4978 * 1770 5155 1621 2528 * * 5294 5420 6041 6521 * * 4605 61 0 * * * * * * 4853 0 0 K 62 * * * * * * * * 46 * * * * 4986 * * * * * * 62 0 * * * * * * 4850 0 0 S 63 2094 * * * * 6722 * 6410 * 5983 * * * * * 746 3436 4639 * * 63 67 * 4454 * * * * 4850 0 0 E 64 4712 6004 4369 2945 6753 * 6790 * 1904 5002 6397 5484 * 4297 1720 5628 * 5703 * 5438 64 0 * * * * 939 1063 4743 0 1706 A 65 2735 * 4911 4835 6849 6088 * 4431 4934 2849 2227 6575 * 4951 3653 3783 3660 6120 * 4710 65 0 * * * * * 0 4765 0 1000 L 66 6125 * * * * * * 3468 * 348 5769 * * * * 6241 * 3681 * * 66 18 6329 * 2322 322 * 0 4765 1000 1000 L 67 6065 * 6242 * 4206 * * 3731 * 434 4058 * * * * 5463 * 5699 * * 67 39 6065 6415 1585 585 0 * 4859 1000 1000 Y 68 * * 4708 5609 4161 7058 * 6282 * * * 4692 381 5318 * 5306 * * * 6937 68 45 5779 6299 2723 237 * 0 4939 1753 1000 A 69 3472 * 4667 4994 * 4484 5674 5497 1937 5056 * 4539 3870 5100 2535 3700 4376 5417 * * 69 74 5298 5354 988 1012 1460 652 5027 1908 1863 P 70 4222 * 3760 3173 5477 5614 5142 5892 4526 3943 * 5419 1520 6038 6480 3458 6746 3912 * * 70 47 * 4970 * * * 0 5070 0 2260 L 71 4295 * 4801 1504 * 5086 * 6222 2910 5417 4810 4475 3414 6051 6726 4611 4075 4010 * * 71 27 7290 6384 0 * 907 1099 5044 1000 2853 R 72 4733 * 2386 1745 5758 5992 6258 4431 4220 5286 4950 6023 * 5126 3714 6572 4730 3333 * * 72 9 7339 * 2322 322 1290 759 5066 1000 2342 R 73 4404 * 3223 1514 * 4357 5604 4243 3954 4705 * 5587 5498 5357 3893 4558 5587 3784 * * 73 22 6078 * 0 * 0 * 5047 1000 1873 V 74 5526 * 3405 1643 * * * 4334 * 3347 * 4374 4237 3476 5617 4266 3889 3559 * * 74 59 7445 4868 0 * * * 5022 1000 0 E 75 5837 * 2753 1155 * 6484 5978 5179 4023 5948 * 5817 7047 4156 4409 5087 3864 5256 * * 75 41 * 5173 * * 982 1018 4949 0 1753 R 76 4008 * 1932 1569 * 7002 * 4684 5052 6860 4489 * 6699 * 3224 * 4930 4313 * 6824 76 43 7036 5516 0 * 1641 558 5007 1000 2391 Y 77 3985 * 3572 1183 4234 6099 6507 6292 3414 4973 * 5964 6953 6413 4947 6570 5267 4962 * 4098 77 54 5970 5588 0 * 913 1092 5066 1000 2322 Y 78 5826 * 2984 3215 4439 6256 * 5213 5068 3052 6474 5499 4251 2793 * 4843 4715 3585 * 2997 78 26 * 5789 * * 415 2000 5039 0 2078 T 79 6884 * 4611 1443 * 4052 * 5060 6397 3460 6119 5767 3161 5026 * 4718 3626 3908 5105 * 79 79 * 4239 * * 1598 579 5035 0 1663 F 80 5401 * 3308 2508 4066 3633 * 5992 3359 2533 5077 5681 6189 5334 4105 5617 5063 * * 3691 80 14 6652 * 1585 585 0 * 5040 1000 2374 D 81 6164 * 2718 1369 * * * 5387 3394 3299 6583 5953 * 3138 5771 4759 5667 6469 * * 81 15 * 6628 * * * * 5015 0 0 D 82 4442 * 963 1959 * 6637 * * 4285 * * * 5082 4818 6357 5891 6329 5961 * * 82 0 * * * * * 0 5048 0 1000 L 83 3493 * 4508 4040 3812 * * 3583 * 1651 6052 * 2704 5438 4512 4546 4183 * * * 83 0 * * * * 0 * 4946 0 1000 L 84 4637 * 6384 5031 4658 5193 * 3281 5637 3079 6223 6118 * 3707 1833 5976 4625 2577 * * 84 0 * * * * * * 4958 0 0 D 85 3376 * 1851 1532 * 6258 * * 4930 5714 * 4260 * 3846 4337 5025 6174 * * * 85 0 * * * * * * 4910 0 0 A 86 2623 * 4024 3157 6072 6137 * 4127 4894 2606 4789 * * 3295 2724 3898 6411 * * 6428 86 0 * * * * * * 4845 0 0 L 87 * * * 5274 * * * 3595 * 402 4884 * * * * * * 4049 * 4622 87 0 * * * * * * 4640 0 0 X 88 3382 * 4289 2759 3615 * * 2962 4075 3705 4625 5970 * 5578 5719 * * 2172 * 4614 88 0 * * * * * * 4527 0 0 D 89 3901 * 2752 1803 4723 * * * 3198 * * 4061 * 4271 2372 5999 5031 * * * 89 36 5355 * 1000 1000 * * 4557 1000 0 A 90 4301 * * 4875 * * * * 3835 2979 * * 4745 2323 1587 3304 * * * 4411 90 0 * * * * * * 4430 0 0 L 91 * * * * * 5537 * 2436 * 710 4134 * * 4227 4745 * * 4849 * * 91 0 * * * * * * 4430 0 0 E 92 * * 5587 1741 5366 * * 3324 3515 2049 5606 * * 3315 4359 * 4134 * * * 92 0 * * * * * * 4400 0 0 E 93 * * * 73 * * * * * * * * * * 4340 * * * * * 93 0 * * * * * * 4054 0 0 A 94 0 * * * * * * * * * * * * * * * * * * * 94 0 * * 0 * * * 2019 0 0 //