HHsearch 1.5 NAME c6ijoG_ FAM FILE c6ijoG_ COM /bmm/www/servers/phyre2/HH/hhmake -i c6ijoG_.a3m DATE Sat Mar 23 08:24:22 2019 LENG 70 match states, 70 columns in multiple alignment FILT 11 out of 15 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.3 EVD 0.4579 1.5621 SEQ >ss_dssp CCTTTHHHHHHHHHTTHHHHTSHHHHCCCCCCCCCSTTCCCHHHHHHHHHHHHHHHHHHHHHTTSSSCCC >sa_dssp EDEEECCDDCCEDDCCDBCEEDCDEDEEEEEEDDEDECBBBEECDEDCCEEADDDAEDDCEDDEEEDEEE >ss_pred CCCEEEEEECHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >ss_conf 9832787011599999978874311100113126984026899999754689999999997412024789 >Consensus lxxnxiixxsTaaxLxxgRFvfxpxxrxnxxxxtnDPAGFtiVDvlAwGsxgHxigxxilaxxsxxgxxx >c6ijoG_ LDPQIVISGSTAAFLAIGRFVFLGYQRRSTIFATNDPAGFNIIDVAGWGALGHAVGFAVLAINSLQGANL >UniRef50_A4RX32(25-115:118) PsaG, PSI-G, subunit V, photosystem I polypeptide n=2 Tax=Ostreococcus RepID=A4RX32_OSTLU E=6e-15 s/c=0.90 id=59% cov=94% -DVNVVISSANAICLALGRFVFLPYQRaqvervgaptqngqthfaagdsraeeASFIVSTNDPAGFTIVDLLAWGSIGHAVGFLALASQSAQ---- >UniRef50_C1FHM8(46-123:125) Photosystem I subunit X, chloroplast n=2 Tax=Micromonas RepID=C1FHM8_9CHLO E=9e-15 s/c=1.04 id=32% cov=93% ---NVIVCVNTAACLFAGRFGLAPTVNKNYtgsdsytmteaerpVVGSRDPAGFTIVDVAAWGSLAHMISAGEILGQHAKG--- >UniRef50_A9SH79(71-159:166) Predicted protein n=3 Tax=Embryophyta RepID=A9SH79_PHYPA E=2e-14 s/c=0.90 id=53% cov=89% -NTALTITLSTGALLFLGRFVFLPFQRDNVsrqglpeqngvthydagdtraqevvgMLKTNDPAGFTLVDVLAWGALGHAIGFFILAT-------- >UniRef50_Q9SPM4(17-105:112) Photosystem I reaction center subunit V, chloroplastic n=2 Tax=Bryopsida RepID=PSAG_TORRU E=7e-13 s/c=0.84 id=58% cov=91% -NTSFIISASTAALLALGRFVFLPFQRSMvsrhglpeqngvpttrrvtavrrrwwSMLKTNDPAGFTLVDVLAWGALGHAVGFFILATAT------ >UniRef50_Q9SUI5(52-129:130) Photosystem I reaction center subunit psaK, chloroplastic n=28 Tax=Embryophyta RepID=PSAK_ARATH E=2e-05 s/c=0.64 id=32% cov=80% -STNLIMVTSTTLMLFAGRFGLAPSANRKATaglrleardsgLQTGDPAGFTLADTLACGTVGHIIG-------------- >UniRef50_A4S8Y7(26-100:105) Putative psaK, PSI-K, subunit X, photosystem I polypeptide (Fragment) n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S8Y7_OSTLU E=0.0004 s/c=0.61 id=25% cov=76% ---NMIVCANTAAIMGAMRFGLMPSVKKNYngasshtamveqastkNIGSRDPAGFTAVDVLAAGSFATII--------------- >UniRef50_P14225(33-112:113) Photosystem I reaction center subunit psaK, chloroplastic n=2 Tax=Chlamydomonas reinhardtii RepID=PSAK_CHLRE E=0.0006 s/c=0.57 id=37% cov=86% -STNLIMVASTTATLAAARFGLAPTVKKNTTAGlklvdsknsagviSNDPAGFTIVDVLAMGAAGHGLGVGIV---------- >UniRef50_Q00327(46-134:143) Photosystem I reaction center subunit V, chloroplastic n=7 Tax=Magnoliophyta RepID=PSAG_HORVU E=1e-13 s/c=0.87 id=49% cov=93% LEPSVVISLSTGLSLVMGRFVFFNFQRENVakqvpeqngkthfeagderakefagILKSNDPVGFNLVDVLAWGSIGHIVAYYILATTS------ >UniRef50_C1FE99(46-134:140) Photosystem I subunit V n=2 Tax=Micromonas RepID=C1FE99_9CHLO E=7e-13 s/c=0.84 id=56% cov=91% -DVQLTISGCNALALALGRFVFLPAIREKTasqgpgvqngeshftagdaraeeaasVFATNDPAGFTIVDLLMWGSIGHAIGYSALASQS------ # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * L 1 * * * * * * * * * 0 * * * * * * * * * * 1 0 * * * * * * 1466 0 0 D 2 * * 1599 3248 * * * * * * * 2489 * * * 1371 * * * * 2 0 * * * * * * 2185 0 0 P 3 * * * * * * * * * * * * 1670 * * * 1095 2201 * * 3 0 * * * * * * 2185 0 0 Q 4 3795 * * * * * * * * * * 951 * 2456 * 2129 * * * * 4 0 * * * * * * 2385 0 0 I 5 * * * * 3866 * * 2552 * 1426 2981 * * * * * * 1933 * * 5 0 * * * * * * 2385 0 0 V 6 * * * * * * * 1000 * * * * * * * * 2633 1561 * * 6 0 * * * * * * 2385 0 0 I 7 * * * * * * * 815 * * 2244 * * * * * * 2182 * * 7 0 * * * * * * 2385 0 0 S 8 * 2182 * * * * * * * * * * * * * 1010 3795 2244 * * 8 0 * * * * * * 2385 0 0 G 9 1775 * * * * 2456 * * * 2107 * * * * * 3544 3132 3416 * * 9 0 * * * * * * 2385 0 0 S 10 3544 3488 * * * * * * * * * 2182 * * * 725 * * * * 10 0 * * * * * * 2385 0 0 T 11 * * * * * * * * * * * 2516 * * * * 277 * * * 11 0 * * * * * * 2385 0 0 A 12 845 * * * * 2107 * * * * * * * * * * 2244 * * * 12 0 * * * * * * 2385 0 0 A 13 860 * * * * * * 3544 * 1461 * * * * * * * * * * 13 0 * * * * * * 2385 0 0 F 14 3488 2479 * * 3425 * * 2981 * 2830 3132 * * * * 2644 3366 * * * 14 0 * * * * * * 2385 0 0 L 15 * * * * * * * * * 195 2981 * * * * * * * * * 15 0 * * * * * * 2385 0 0 A 16 1206 * * * 1485 2981 * * * * * * * * * * * 3599 * * 16 0 * * * * * * 2385 0 0 I 17 1213 * * * * * * 3425 * 1348 3599 * * * * * * * * * 17 0 * * * * * * 2385 0 0 G 18 3366 * * * * 365 * * * * 2981 * * * * * * * * * 18 0 * * * * * * 2385 0 0 R 19 * * * * * * * * * * * * * * 0 * * * * * 19 0 * * * * * * 2385 0 0 F 20 * * * * 0 * * * * * * * * * * * * * * * 20 0 * * * * * * 2385 0 0 V 21 * * * * * 1213 * * * * * * * * * * * 815 * * 21 0 * * * * * * 2385 0 0 F 22 * * * * 815 * * * * 1213 * * * * * * * * * * 22 0 * * * * * * 2385 0 0 L 23 1714 * * * 2644 * * * * 1291 2981 * * * * * * * * * 23 0 * * * * * * 2385 0 0 G 24 * * * * * 3425 * * * * * 2644 421 * * * * * * * 24 0 * * * * * * 2385 0 0 Y 25 3488 * * * 1734 * * * * * * * * * * 2054 2391 * * 2483 25 0 * * * * * * 2385 0 0 Q 26 3132 * * * * * * 3488 * * * * * 1061 * * * 1656 * * 26 0 * * * * * * 2385 0 0 R 27 * * * * * * * * 2160 * * 2267 * * 815 * * * * * 27 129 3544 * 4700 57 * * 2385 1000 0 R 28 3544 * 3795 2005 * * * * 1656 * * * * * 2271 3866 * * * * 28 0 * * * * * * 2385 0 0 S 29 * * * * * * * * 2299 * 3866 864 * * * 2483 * * * * 29 228 2776 * 4700 57 * * 2385 1331 0 T 30 3132 * * * 3544 * * * * * * * * * * 2776 1840 2693 * 2182 30 900 1107 * 4341 73 * * 2385 2023 0 I 31 * * * * * * * 1936 * 3691 2830 2981 * * * * 2244 2452 * * 31 175 3132 * 3459 138 * * 2385 1000 0 F 32 3366 * * * 2456 * * 2981 * 1270 * * * * * * * 2479 * * 32 0 * * * * * * 2385 0 0 A 33 2456 * * * * 1656 * * 1734 * * * * 3132 * 3544 * * * * 33 147 3366 * 3700 115 * * 2385 1000 0 T 34 * * * * * * * * * * * * * * * 1067 936 * * * 34 0 * * * * * * 2385 0 0 N 35 * * * * * 3132 * * * * * 587 * * 2182 * * * * * 35 0 * * * * * * 2385 0 0 D 36 * * 0 * * * * * * * * * * * * * * * * * 36 0 * * * * * * 2385 0 0 P 37 * * * * * * * * * * * * 0 * * * * * * * 37 0 * * * * * * 2385 0 0 A 38 252 * * * * * * 3691 * * * * * * * * * 3599 * * 38 0 * * * * * * 2385 0 0 G 39 * * * * * 0 * * * * * * * * * * * * * * 39 0 * * * * * * 2385 0 0 F 40 * * * * 0 * * * * * * * * * * * * * * * 40 0 * * * * * * 2385 0 0 N 41 * * * * * * * * * * * 1982 * * * * 421 * * * 41 0 * * * * * * 2385 0 0 I 42 2981 * * * * * * 900 * 1568 * * * * * * * * * * 42 0 * * * * * * 2385 0 0 I 43 3132 * * * * * * 3425 * * * * * * * * * 335 * * 43 0 * * * * * * 2385 0 0 D 44 * * 0 * * * * * * * * * * * * * * * * * 44 0 * * * * * * 2385 0 0 V 45 * * * * * * * * * 2516 * * * * * * 3132 492 * * 45 0 * * * * * * 2385 0 0 A 46 2421 * * * * * * * * 298 * * * * * * * * * * 46 0 * * * * * * 2385 0 0 G 47 290 * * * * 3425 * * * * 3488 * * * * * * * * * 47 0 * * * * * * 2385 0 0 W 48 2981 3132 * * * * * * * * 3366 * * * * * * * 595 * 48 0 * * * * * * 2385 0 0 G 49 * * * * * 0 * * * * * * * * * * * * * * 49 0 * * * * * * 2385 0 0 A 50 1596 * * * * * * * * * * * * * * 849 3132 * * * 50 0 * * * * * * 2385 0 0 L 51 3366 * * * 2981 * * 1579 * 1611 * * * * * * * 3132 * * 51 0 * * * * * * 2385 0 0 G 52 2182 * * * * 359 * * * * * * * * * * * * * * 52 0 * * * * * * 2385 0 0 H 53 * * * * * * 195 * * * * * * * * * 2981 * * * 53 0 * * * * * * 2385 0 0 A 54 1291 * * * * 3366 * 1319 * * 3416 * * * * * * * * * 54 0 * * * * * * 2385 0 0 V 55 * * * * * * * 1013 * 3366 * * * * * * * 1296 * * 55 0 * * * * * * 2385 0 0 G 56 2482 * * * * 528 * * * * * * * * * 2972 * * * * 56 0 * * * * * * 2346 0 0 F 57 2717 * * * 1348 * * * * * * * * * * * * 2729 * 1716 57 0 * * * * * * 2207 0 0 A 58 3128 * * * 2520 1723 * * * 3265 * * * * * 3164 * * * 2375 58 0 * * * * * * 2207 0 0 V 59 2214 * * 2717 * * * 949 * * * * * * * * * 3128 * * 59 0 * * * * * * 2207 0 0 L 60 * * * * * * * 2717 * 521 * * * * * * * 2729 * * 60 0 * * * * * * 2207 0 0 A 61 337 * * * * * * * * 2264 * * * * * * * * * * 61 0 * * * * * * 2088 0 0 I 62 * * * * * 2264 * 2953 * * * * * * * 2051 1247 * * * 62 0 * * * * * * 2088 0 0 N 63 2967 * * * * * * * * * * 2822 * 1046 * 3059 2983 * * * 63 0 * * * * * * 2111 0 0 S 64 * * * * * * 2178 * * * * * * * * 619 2967 * * * 64 0 * * * * * * 2111 0 0 L 65 568 * * * * * * * * 1620 * * * * * * * * * * 65 0 * * * * * * 1744 0 0 Q 66 * * * * * * * * 1423 * * * * 673 * * * * * * 66 0 * * * * * * 1744 0 0 G 67 * * * * * 0 * * * * * * * * * * * * * * 67 0 * * * * * * 1593 0 0 A 68 0 * * * * * * * * * * * * * * * * * * * 68 0 * * * * * * 1000 0 0 N 69 * * * * * * * * * * * 0 * * * * * * * * 69 0 * * * * * * 1000 0 0 L 70 * * * * * * * * * 0 * * * * * * * * * * 70 0 * * 0 * * * 1000 0 0 //