HHsearch 1.5 NAME c6i6oC_ FAM FILE c6i6oC_ COM /bmm/www/servers/phyre2/HH/hhmake -i c6i6oC_.a3m DATE Sat Nov 30 08:22:35 2019 LENG 105 match states, 105 columns in multiple alignment FILT 127 out of 245 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.9 EVD 0.4065 -0.4238 SEQ >ss_dssp CCHHHHHHHHHTCEEEEEEEECSSTTEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEECCHHHHHHHH HHHCC >sa_dssp EBEACEDBDECEBDCCDDDDECEDECCCDBCBAACBECDEDDCDDACEBADDBBEDBCBECCEDEDDBDDEBEEECEECDDACCACBCADBDEECCECBE ECDEE >ss_pred CCCHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEECCCCCEEEEEEEEEECCHHHHHHHH HHHCC >ss_conf 9703443120100200267406888732289998489999999999999999998569789997115862121563355335899999970966999999 85089 >Consensus xxxxxxxxxxxxxxxxxxxxaxxxxxkYExmxIlxPdlxeexxxxxxexxxxiixxxGgxvxxxexwGxRxLAYxIkKxxxGxYvlxxfxaxxxxIxEle RxlrL >c6i6oC_ VNDAARELRIRDNVRRVMVVASTTPGRYEVNIVLNPNLDQSQLALEKEIIQRALENYGARVEKVEELGLRRLAYPIAKDPQGYFLWYQVEMPEDRVNDLA RELRI >UniRef50_UPI0001C31B4E(8-85:124) ribosomal protein S6 n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31B4E E=4e-14 s/c=1.01 id=23% cov=75% ---------------------------YDLMLLLRTSVEDERRAQIRADVEQTIADNGGQIELTQEWGVRNLAYEIDHVRDAEYHLLQFSGPAELVETLS YNLKI >UniRef50_B6KU11(267-361:406) Ribosomal protein S6, putative n=3 Tax=Toxoplasma gondii RepID=B6KU11_TOXGO E=3e-05 s/c=0.52 id=22% cov=75% ---------------------------YRVVALFRPELSVPKIKEAVRPYVDQLQQWRCRSLRVTYRGYRRLAYRVKKKDSAHVVEMTFDLLPSAVHYLH VKLNL >UniRef50_Q1D291(6-89:158) Ribosomal protein S6 n=2 Tax=Cystobacterineae RepID=Q1D291_MYXXD E=7e-17 s/c=1.05 id=22% cov=81% --------------------AATRLREYETIFLVKPDLTDDNVDKLKERVRGIVSREGGKVIRFTVWGKKKTLFPVAKQPRAIYVHTHFLGGAKLVAEIE RNLR- >UniRef50_A8RF21(1-81:97) Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RF21_9FIRM E=2e-16 s/c=1.07 id=19% cov=76% --------------------------KYEIMYIVNASLDEAASQKVMDSLHKIITDHEGTIDNVDDWGVKEFAYEIKHMNKGHYVVINVTANNEGIHEFE RLARI >UniRef50_O19917(2-91:103) 30S ribosomal protein S6, chloroplastic n=1 Tax=Cyanidium caldarium RepID=RR6_CYACA E=2e-11 s/c=0.78 id=20% cov=76% --------------------------QYEIMLIMRPDLPEEKFLKFLSEIKEHAKRNLALEFNLSNRGRRKLAYAMRKFQDGIYIQFNFLGSGYILNSLI KRLKL >UniRef50_A6CAM0(4-81:138) Probable ribosomal protein S6 n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CAM0_9PLAN E=5e-09 s/c=0.80 id=22% cov=34% ----------------------------------------------------------------------KLAYEIEGHMKGLHYLVYFTMPGSGMDVIT RSCHL >UniRef50_B0SB40(1-77:91) 30S ribosomal protein S6 n=2 Tax=Leptospira biflexa serovar Patoc RepID=RS6_LEPBA E=3e-09 s/c=0.82 id=23% cov=57% ----------------------------------------------KSAVKELLSKYNFTIQGEEDWGSKRLWHPVGQDEQGHFTLIKCSGSPTEVAKIE HEFKL >UniRef50_B3E0Q6(3-81:111) Ribosomal protein S6 n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3E0Q6_METI4 E=4e-08 s/c=0.75 id=21% cov=55% -----------------------------------------------EQIEKTITQLGGKVISLQKMDKRKFERVATKIDSGYYLNMGIELSPYALKELE AKLK- >UniRef50_Q5TTH4(4-82:150) AGAP003217-PA n=7 Tax=Neoptera RepID=Q5TTH4_ANOGA E=0.0002 s/c=0.59 id=23% cov=21% ---------------------------------------------------------------------------------GSYFVFKFDTPPSAIDDLD EE--- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * V 1 * * * * * * * * * * * * * * * * * 0 * * 1 0 * * * * * * 1000 0 0 N 2 * * * * * * * * * * * 0 * * * * * * * * 2 0 * * * * * * 1000 0 0 D 3 * * 0 * * * * * * * * * * * * * * * * * 3 0 * * * * * * 1000 0 0 A 4 0 * * * * * * * * * * * * * * * * * * * 4 0 * * * * * * 1000 0 0 A 5 0 * * * * * * * * * * * * * * * * * * * 5 0 * * * * * * 1000 0 0 R 6 * * * * * * * * * * * * * * 0 * * * * * 6 0 * * * * * * 1000 0 0 E 7 * * * 0 * * * * * * * * * * * * * * * * 7 0 * * * * * * 1000 0 0 L 8 * * * * * * * * * 0 * * * * * * * * * * 8 0 * * * * * * 1000 0 0 R 9 * * * * * * * * * * * * * * 0 * * * * * 9 0 * * * * * * 1000 0 0 I 10 * * * * * * * 0 * * * * * * * * * * * * 10 0 * * * * * * 1000 0 0 R 11 * * * * * * * * 1000 * * * * * 1000 * * * * * 11 0 * * * * * * 1654 0 0 D 12 * * 1000 * * * * * * * * * * * 1000 * * * * * 12 0 * * * * * * 1654 0 0 N 13 * * * * * * * * 1541 * * 608 * * * * * * * * 13 0 * * * * * * 2111 0 0 V 14 * * * * * * * * * * * * * * 1557 * * 599 * * 14 0 * * * * * * 2111 0 0 R 15 * * * 1541 * * * * * * * * * 1557 1660 * * * * * 15 0 * * * * * * 2111 0 0 R 16 * * * * * * * * 1541 * * * * * 608 * * * * * 16 0 * * * * * * 2111 0 0 V 17 * * * * * * * * * * * * 1557 * * * 1541 1660 * * 17 0 * * * * * * 2111 0 0 M 18 * * * * * * * * 2033 * 2101 * * 1968 * * * 1905 * * 18 0 * * * * * * 2510 0 0 V 19 * * * 2331 * * * * * * * * * * * * * 320 * * 19 0 * * * * * * 2778 0 0 V 20 739 * * * * * * * * * * * * * * * 2268 2373 * * 20 0 * * * * * * 2778 0 0 A 21 449 * * * * 2999 * * 2812 * * * * * * * * * * * 21 0 * * * * * * 3321 0 0 S 22 2888 * * * * * * 3109 2812 * * * 2159 * * 3034 2999 2883 * * 22 210 2883 * 1585 585 * * 3321 1000 0 T 23 2883 * 3255 * * 3069 * * * * * 2812 * * * * 1005 * * * 23 0 * * * * * * 3321 0 0 T 24 3012 * * 2145 * * * * * * * * * * 2109 3135 1717 * * * 24 0 * * * * * * 3436 0 0 P 25 2756 * 3649 * * * * * * 3511 3556 * 964 3526 * * * * * * 25 0 * * * * * * 3765 0 0 G 26 3668 * * * * 3692 * * * * * 1722 * * 887 * * * * * 26 0 * * * * * * 3799 0 0 R 27 5138 * * 3478 * * 5217 * 987 * * 5619 5616 2812 2906 4888 * * * * 27 24 5928 * 0 * * * 4992 1000 0 Y 28 * * * * 5846 * * * * * * * * * * * * * * 25 28 0 * * * * * * 5616 0 0 E 29 * * 5232 145 * * * * * * * 5156 * * 4609 * * * * * 29 0 * * * * * * 5616 0 0 V 30 5293 5502 * 6851 * 5183 4564 2705 6532 2584 3813 * * * * 7035 1716 2645 * * 30 0 * * * * * * 5616 0 0 N 31 5050 * 5156 * 6522 * * 3455 * 3676 1410 5243 * * * * 3268 1973 * * 31 0 * * * * * * 5616 0 0 I 32 4637 6506 * * 2409 * * 3263 * 2150 4919 * * * * * 5069 3228 5900 2030 32 0 * * * * * * 5616 0 0 V 33 6885 * * * 6669 * * 944 * 1841 5156 * * * * * * 2690 * * 33 0 * * * * * * 5616 0 0 L 34 3331 * * * 3550 * * 2213 * 1555 4667 * * * * 6251 6259 2369 * * 34 0 * * * * * * 5616 0 0 N 35 4911 * 3324 * * * 5156 6939 2788 6532 * 2725 * 4592 1613 3529 4167 * * 6245 35 18 * 6335 * * * * 5616 0 0 P 36 3943 5151 * 5787 * 4302 * * * * * * 362 4929 * 6237 6182 * * * 36 0 * * * * 0 * 5604 0 1000 N 37 5083 * 1414 2612 * 4402 * * 5867 6593 6603 2905 * 5529 * 4131 3474 4492 * * 37 0 * * * * * * 5616 0 0 L 38 5153 5996 * * 3931 * * 3477 5198 812 5493 * * 5668 * 6077 4404 3319 * * 38 65 5235 5839 396 2060 * * 5616 1989 0 D 39 6895 * 2260 3002 * 4641 6305 * 6239 6154 * 3353 3722 * * 2215 2496 6420 * * 39 53 * 4784 * * 981 1019 5617 0 1597 Q 40 4700 * 1889 1301 * 6790 * 5083 4500 5867 * 5224 4994 3599 * 5785 * 5216 * * 40 22 * 6032 * * 949 1052 5583 0 2470 S 41 3887 * 2723 1039 * * * * 5067 * * 4442 4797 6495 5717 3072 4900 * * * 41 0 * * * * 537 1685 5559 0 2080 Q 42 3297 * 4455 1728 * 3592 * * 3477 * * 4421 6110 2437 5008 6430 4793 4834 * 5769 42 0 * * * * 0 * 5584 0 1000 L 43 4215 * * * 5209 * 6850 2157 * 2497 4915 5529 * 7159 2497 5376 4984 2291 * 6634 43 0 * * * * * * 5616 0 0 A 44 2496 * 3754 2727 6073 6335 6398 * 2112 3764 * 4460 * 3584 * 4919 3450 * * * 44 22 * 6077 * * * * 5616 0 0 L 45 1866 * 5534 2907 * 5259 * 4510 2313 5476 5825 5277 6600 4232 6574 3793 3514 * * * 45 13 * 6783 * * * 0 5594 0 1000 E 46 3242 * * 3014 4662 * 6746 3383 4058 1770 5741 5812 6799 * * 5398 3599 3285 5775 * 46 0 * * * * * 0 5599 0 1548 K 47 4952 * 6529 5721 4447 6580 6564 2195 3416 3100 4232 3735 * 6634 6202 5698 4276 2260 * 6552 47 13 * 6852 * * 0 * 5690 0 1548 E 48 3572 * 2728 1354 5953 6336 * * 3678 * * 3829 * 5689 4729 3169 5133 * * * 48 0 * * * * * 0 5769 0 1000 I 49 5130 * 4605 2805 5171 6930 6297 5245 1910 6124 6681 5039 5288 4332 2253 4276 4550 * * 6363 49 0 * * * * 0 * 5769 0 1000 I 50 5293 * * * 2905 * * 2137 * 2844 6244 * * 6275 * * * 2173 * 2142 50 0 * * * * * * 5781 0 0 Q 51 3845 * * 2960 6176 * 5005 * 2272 5836 6149 4460 * 2319 2960 4253 3895 5358 * * 51 0 * * * * * * 5783 0 0 R 52 3080 * 2989 2750 * 3218 6443 * 2873 * * 3832 * 4022 5678 3178 3907 * * 5428 52 0 * * * * * * 5793 0 0 A 53 4256 * 6931 5049 4240 6586 6016 2226 * 2260 5400 5822 * 4990 * 6139 3374 2329 * 5303 53 0 * * * * * * 6184 0 0 L 54 5972 * * * 3667 * * 1536 * 1427 5440 * * * * * * 2596 * * 54 0 * * * * * * 6051 0 0 E 55 3580 * 4861 2182 * 5139 6416 6195 2822 5098 6473 4878 * 3789 4268 4333 2463 4764 * * 55 0 * * * * * * 6051 0 0 N 56 4386 * 3285 2324 * 6609 * * 2466 4992 6416 3603 6240 3232 3764 3080 5529 * * * 56 51 7698 5054 0 * * * 6051 1000 0 Y 57 4036 * 6061 4049 4915 3685 4155 * 4369 3904 5520 1897 * 4928 4801 5101 7192 5129 5349 2906 57 0 * * * * * 0 6013 0 1649 G 58 * * 4129 4759 * 674 5400 * 3885 5285 * 3752 5791 6173 5378 4979 * * * * 58 43 * 5080 * * 0 * 6006 0 1649 A 59 2027 5017 * * 5607 856 * * 6676 * * 5724 * * * 4723 5252 4114 * * 59 0 * * * * 615 1526 6018 0 1971 R 60 4602 7109 4520 2104 * * 6073 6490 2467 6139 6309 4955 * 3726 3742 4385 2683 4463 * 6627 60 12 6944 * 0 * 0 * 6014 1000 1000 V 61 6230 * 5321 4702 6272 * 6757 1645 7543 3605 5910 5253 6607 * 6158 5573 * 1392 6388 6314 61 12 * 6958 * * * * 6038 0 0 E 62 4740 7506 4865 3029 4026 6604 4383 3187 3581 3086 7138 4207 * 5030 5332 * 3106 3086 5726 * 62 30 6187 7138 391 2075 0 * 6044 1341 1000 K 63 4279 * 6490 2876 6679 5709 4867 4875 2105 5866 * 3578 * 3715 2723 3306 5267 5975 * * 63 0 * * * * 0 * 5963 0 1000 V 64 4864 * 5585 3507 4356 * 6077 3582 6637 2837 * 5343 6550 4469 7158 4745 3275 1720 * 5148 64 0 * * * * * * 5915 0 0 E 65 4604 * 2181 1679 6303 7174 6405 6847 4577 5035 * 3608 * 3274 6079 5390 3792 5844 * * 65 15 * 6627 * * * * 5915 0 0 E 66 6403 * 2319 3182 5979 5447 3951 * 3247 5685 6447 2592 4357 5868 5470 5323 5651 4536 * 3386 66 35 6338 6444 1585 585 * 0 5905 1517 1000 L 67 5884 * 5957 * 7118 * * 4182 4558 2917 3666 * * 7279 3370 * 6329 5859 1036 5041 67 0 * * * * 874 1138 5906 0 1651 G 68 * * 5061 5174 * 128 * * 6403 * * * * * * * 6041 * * * 68 0 * * * * 0 * 5905 0 1000 L 69 5236 * 6352 5149 * * * 5500 1850 2645 3936 5355 * 5093 2368 5128 5540 3729 6079 5602 69 0 * * * * * * 5915 0 0 R 70 * 6435 * * * * 6054 6303 2278 4741 * * * 4060 707 5565 6076 6882 * * 70 0 * * * * * * 5921 0 0 R 71 5620 * 3610 4532 * 7165 5907 * 1963 * 6685 3669 5377 3654 1874 5478 3516 * * * 71 0 * * * * * * 5926 0 0 L 72 * * * * 2861 * * 6471 * 362 5244 5653 * * * * 5228 * * * 72 0 * * * * * * 5926 0 0 A 73 450 * * 5015 * * * * 6610 6377 * 5907 4929 * * 3894 4686 5308 4888 * 73 25 5891 * 531 1700 * * 5926 1648 0 Y 74 * * * * 4303 * 4632 * * * * * * * 4720 * 6189 * * 222 74 23 5977 * 2000 415 * * 5926 1000 0 P 75 4829 * 5749 1908 5831 * 5925 7088 3659 5636 6610 5907 1496 * 3551 5144 5311 5722 * * 75 0 * * * * * * 5926 0 0 I 76 5078 * * * * 5977 * 452 * 5219 4887 * 6717 * * 6342 6075 2989 * * 76 5 8206 * 0 * * * 5926 1000 0 A 77 3734 * 3317 4535 * 3526 6652 6257 1666 * * 2795 * 3457 3386 7119 5756 * * * 77 9 7342 * 1000 1000 * * 6020 1000 0 K 78 6105 * 4713 7056 * 3504 3362 * 723 * * 4221 * 5754 4985 5192 * * * 5850 78 21 6088 * 2000 415 * * 6025 1000 0 D 79 4986 * 4831 4216 3799 * 3085 5010 3203 3236 5149 3874 6429 3529 3980 4855 * 4649 * 3164 79 10 7150 * 3322 152 * * 6023 1000 0 P 80 5916 * 4308 3630 5953 * 6879 * 2271 6150 5616 3710 4798 4315 2470 4452 2643 6055 * 5504 80 14 6658 * 1000 1000 * * 6023 1000 0 Q 81 5687 * 3074 1990 6839 * 5911 6829 2326 * 7417 6153 * 3470 2899 3264 5141 * * * 81 0 * * * * * * 6023 0 0 G 82 1794 * * * * 491 * * * * * * * * * * * * * * 82 0 * * * * * * 6027 0 0 Y 83 6144 * 5247 6012 3735 * 2625 2637 6120 4859 7417 4991 * 4284 4009 7656 5301 4931 * 1819 83 0 * * * * * * 6027 0 0 F 84 * 6583 * * 3527 * 6728 * * * * * * * 6464 * * 5636 * 214 84 0 * * * * * * 5997 0 0 L 85 5495 5400 * 6383 3246 * 4810 3330 * 3453 6373 6079 * 7192 * 4579 4199 1366 7231 3544 85 0 * * * * * * 6066 0 0 W 86 * * 6844 5517 4149 * 4053 3792 5914 1595 4748 4498 * 3380 5706 * 6422 2939 5086 3944 86 0 * * * * * * 6054 0 0 Y 87 6949 7627 * * 2200 * 6941 2886 * 3054 2034 * * * 6612 6428 4445 3536 6148 3423 87 0 * * * * * * 6054 0 0 Q 88 6059 5979 4343 3056 5455 5915 4229 5002 3593 6355 6065 2280 * 3829 4727 4288 3215 5877 * 3723 88 11 7054 * 1000 1000 * * 6054 1000 0 V 89 * 4979 * * 990 * 6489 2738 * 3780 6092 * * * * * * 3499 * 2968 89 0 * * * * * * 6057 0 0 E 90 5195 6798 3333 1913 * * 6123 6717 3184 3916 * 4124 * 4088 4188 3128 3230 7184 * * 90 12 6893 * 0 * * * 6057 1000 0 M 91 1251 4024 * * 6968 2281 * 5636 * 2989 4006 7031 * 6026 * 4099 7599 6648 * * 91 0 * * * * * * 5968 0 0 P 92 5421 * 2650 2171 * 4033 * * 4911 5509 * 3762 2143 6951 * 3355 4427 * * 5229 92 0 * * * * * * 5968 0 0 E 93 2561 * 6045 5222 * 2258 6644 * 6811 * * 4043 1621 6963 7193 3186 4598 6843 * * 93 0 * * * * * * 5972 0 0 D 94 3063 * 3233 2460 * 4927 5708 * 4395 * * 3471 6811 4322 4028 2637 3437 * * 5095 94 0 * * * * * * 5972 0 0 R 95 2053 5699 * 5367 6107 5006 5304 3856 4032 2740 5039 5602 6426 4918 6062 3937 3838 3560 6978 5266 95 0 * * * * * * 5973 0 0 V 96 5866 * * 6426 * * 6504 1504 * 2372 4397 * 5123 * * 6913 * 1599 * * 96 22 7090 6980 2000 415 * * 5973 1000 0 N 97 2025 * 2977 3995 * 6925 4084 6830 2959 4505 * 3045 5766 4393 4582 4415 4928 7088 * * 97 0 * * * * 0 * 5969 0 1000 D 98 5613 * 3720 760 * 5248 * 5169 3436 5373 * 6920 4971 5387 6632 6247 6637 5436 * 5507 98 0 * * * * * * 5973 0 0 L 99 5942 * * * 2493 * * 2682 * 990 3659 * * * * * * 4638 6441 5970 99 0 * * * * * * 5973 0 0 A 100 5660 * 3384 1083 * 6312 5092 5403 3242 * * 3753 * 5377 4967 5712 3952 5836 6686 * 100 0 * * * * * * 5959 0 0 R 101 4401 * * 4776 * * 4816 * 3006 6398 * 4155 * 4893 864 4493 5144 5482 * 6615 101 0 * * * * * * 5959 0 0 E 102 3911 * 4953 3055 * * 7127 4460 2645 4511 5833 3304 * 4260 2633 4520 4074 3909 * 5448 102 0 * * * * * * 5942 0 0 L 103 4354 5682 * 7024 2949 * * 4131 * 1066 2741 * * * * * 6910 4231 * 4358 103 0 * * * * * * 5938 0 0 R 104 * * 6584 * * 5737 5484 * 1625 5434 * 3225 * 5267 1131 6437 * * * * 104 0 * * * * * * 5925 0 0 I 105 * * * * * * * 1191 * 1079 4590 * * * * * * 4407 * * 105 0 * * 0 * * * 5682 0 0 //