HHsearch 1.5 NAME c6i1dB_ FAM FILE c6i1dB_ COM /bmm/www/servers/phyre2/HH/hhmake -i c6i1dB_.a3m DATE Sat Feb 16 08:15:01 2019 LENG 88 match states, 88 columns in multiple alignment FILT 62 out of 66 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.3 EVD 0.4021 -0.4796 SEQ >ss_dssp CEEEEEEETTCSSCEEEEESSSEEEHHHHHHHHHHHTTCCSSTTEEEEEECTTTCCBCCCTTCEEETTCEEEEEEEECCCCSSGGGTC >sa_dssp EBBADBCBDEDEEECEAEBEDECBCACDABDDAAEEDECDEAEEBCBCACCDEEEEDCEDCEDDADDDCDABADECEDEECCACCBDE >ss_pred CCEEEEEEECCCCCEEEEECCCCEEHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCC >ss_conf 9459999612577326896288345999999999850888775112999718888703776407305767999961675776442339 >Consensus ssxVxYkFxSxkxxxxixfdGxxIsvxdLKxxIxxxxxlgxxxdfdLxixnaxTxeeYxDdxxlIpknSsVivxRvPxxrgxaxxyvx >c6i1dB_ SSTIFYRFKSQRNTSRILFDGTGLTVFDLKREIIQENKLGDGTDFQLKIYNPDTEEEYDDDAFVIPRSTSVIVKRSPAIKGNATRYVT >UniRef50_C4Q7X9(2-78:982) Retinoblastoma binding protein, putative n=4 Tax=Schistosoma RepID=C4Q7X9_SCHMA E=1e-20 s/c=1.31 id=36% cov=89% SSIVYFKFKANVKTDSVSFDGSSISVKDLKNAIRTKCCLYS-TDFDLKLED-TTGKVYSKDDELIPKYSSIVVRRVPRL--------- >UniRef50_A9TBI2(2-94:368) Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TBI2_PHYPA E=4e-10 s/c=0.71 id=27% cov=88% --AIRFRFFSSKAFDNVPVSGDYMSLLELKDAIAERvspgilRGKGHVKEaFDFSIYDADSGEEIVGSNCKVYKYSCVLVKRVPA---------- >UniRef50_C5YSI3(2-82:464) Putative uncharacterized protein Sb08g022295 (Fragment) n=1 Tax=Sorghum bicolor RepID=C5YSI3_SORBI E=3e-17 s/c=1.11 id=30% cov=86% -GVVHYRYRSGVQTFSLPIPGAFASVADLKRLIAATARHGSGRTRgrgprdGIALCDPRTGQEYVDEDTMIPQNSTVLVHRI------------ >UniRef50_Q00Y87(56-138:656) DNA-binding protein-like (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00Y87_OSTTA E=9e-26 s/c=1.42 id=29% cov=95% TGSVRYKFKSAKTFDALAFDGAFIAVGELRRRISEKKGLSKDSACELVLQDASTGVDYDDDSALVWKNASVIARRVPVMRSQA----- >UniRef50_B7G0Q1(2-85:685) Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G0Q1_PHATR E=3e-21 s/c=1.21 id=36% cov=94% SSSILYKFRSGTTFEALPLPGSAARVLDVKKAIVRQKKLdqGGALEFDLSLKDATTQQEYLDESEILPRGTRLIVQRLPAAKGQ------ >UniRef50_A2G2N0(3-78:535) Eukaryotic translation initiation factor 3 subunit 1, putative n=1 Tax=Trichomonas vaginalis RepID=A2G2N0_TRIVA E=9e-15 s/c=1.07 id=31% cov=88% -SRIEYCFCSKKKSSYVTINQSTVALKQLINQIKEQEQLADQDNVTLVVKNRQTGEVYKNEYEFINRNTSVIVYRVP----------- >UniRef50_A7AQ80(6-88:525) Putative uncharacterized protein n=1 Tax=Babesia bovis RepID=A7AQ80_BABBO E=1e-10 s/c=0.81 id=34% cov=86% -GVIFYRFSSERRiWRELQLDSSgGILVSDLKILIAQETSLSKDftrkTNLTVSLYDENSSEEPRplDDNVVVHVGSRVLLNRV------------ >UniRef50_B6AIS0(2-79:501) Zinc finger, C3HC4 type domain-containing protein n=1 Tax=Cryptosporidium muris RN66 RepID=B6AIS0_9CRYT E=3e-13 s/c=0.98 id=27% cov=85% --SVYYRFVHERldSYRSLELNVNSIKTSDLKVLVAEHAGLGKEYTrlFDLRVYDTEEKEVYPDEK-LIPVYSRVVIQRIP----------- >UniRef50_B0EDT8(5-82:203) Putative uncharacterized protein n=2 Tax=Entamoeba RepID=B0EDT8_ENTDI E=1e-12 s/c=0.96 id=31% cov=88% -SVVMYHFEiSKKVNKRIQFYGKSITASEVIGEILKQRKDSFDRD-ELHIFDVQTGHEYVGSDP-ITKNTYLCVKRLPRS--------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * S 1 1656 * * * * * * * * * * * * * * 1050 2323 * * * 1 0 * * * * * * 3290 0 0 S 2 5812 * * * * 2140 * * * * * * * * * 405 * * * * 2 0 * * * * * * 4111 0 0 T 3 2578 4733 4895 * 6183 * * 4510 * * * * * * 4774 1399 3841 2198 * * 3 0 * * * * * * 4398 0 0 I 4 * * * * * * * 1020 * * * * * * * * * 981 * * 4 0 * * * * * * 4481 0 0 F 5 * * * 4872 2536 * 1794 5046 * 4917 4866 4506 * * 3275 * * * * 1942 5 0 * * * * * * 4481 0 0 Y 6 * * * * 2478 * * * * * * * * * * * * * * 285 6 0 * * * * * * 4481 0 0 R 7 * 4872 * * * * 4866 * 764 * * * * 5046 1679 * * * * * 7 0 * * * * * * 4481 0 0 F 8 * * * * 189 * * * * 4494 * * * * * * * * 5950 4002 8 0 * * * * * * 4481 0 0 K 9 4510 4872 * 4866 5193 4531 * * 1439 3562 * * * 4586 2111 3934 * 5318 * * 9 50 4866 * 0 * * * 4481 1000 0 S 10 3526 5764 * * * * 3228 * * * * 4124 * * * 453 * * * * 10 0 * * * * * * 4481 0 0 Q 11 2458 * * 2284 * 4165 * * 3322 * * 4218 * 2321 5146 3037 5038 * * 5476 11 0 * * * * * * 4481 0 0 R 12 * * * * * * * 5262 1223 2872 * 3588 * * 2479 * 4279 3395 * * 12 75 4306 * 1000 1000 * * 4481 1195 0 N 13 4669 * 2074 2419 * 5283 * * 3594 * * 2875 * 5456 5339 3227 3282 4866 * * 13 77 4272 * 0 * * * 4481 1280 0 T 14 * * * 5135 2196 * * * 4078 4578 * 4213 3615 * * 3619 3459 * 4272 1773 14 0 * * * * * * 4481 0 0 S 15 5283 * 1542 4779 4524 * * 5722 3495 * * 6177 * 6313 3289 1885 6214 * * 5046 15 0 * * * * * * 4481 0 0 R 16 4112 * * 4272 * * * * 3843 * * 4012 5938 * 2181 2423 2157 3699 * 4872 16 0 * * * * * * 4481 0 0 I 17 * * * * * * * 1248 * 2059 * * * * * * * 1561 * * 17 0 * * * * * * 4481 0 0 L 18 3425 * 4914 4002 5476 * 4158 * * 6623 * * 2465 3167 * 3461 1876 3901 * * 18 0 * * * * * * 4481 0 0 F 19 * 6147 * * 777 * * 2623 * 3206 5396 * * * * 5207 * 3633 * * 19 0 * * * * * * 4481 0 0 D 20 * * 929 2993 * * * * * * * 2926 3220 4363 * 5193 * * * 4866 20 0 * * * * * * 4481 0 0 G 21 5198 * * 5595 * 376 5722 * * * * * * 4872 * 3930 6379 4306 * * 21 39 5213 * 0 * * * 4481 1494 0 T 22 3692 * 5193 5476 * 6147 5311 5764 4866 2938 6396 4690 3002 4191 * 2528 2019 * * * 22 49 4895 * 0 * * * 4481 1523 0 G 23 4239 * 4415 * 2531 2504 2932 5046 * * * 5969 * 6379 * 1878 4872 6409 * 4521 23 40 5207 * 0 * * * 4481 1000 0 L 24 4161 * * * * * * 621 * 3439 3915 * * * * * * 2884 * * 24 0 * * * * * * 4481 0 0 T 25 3508 * * * * * * * 5318 3608 * * 5538 * 3441 887 2732 * * * 25 0 * * * * * * 4481 0 0 V 26 4315 * * * * 5524 * 3943 * 1954 * * * * * * 4306 851 * * 26 0 * * * * * * 4481 0 0 F 27 2952 6640 5283 5524 2813 2693 * * 3579 3792 * 6177 * * 5760 2249 6130 5764 3555 * 27 0 * * * * * * 4481 0 0 D 28 5483 * 1065 1529 6384 * * 6408 4668 * * 5670 * 4161 * 6086 * * * * 28 0 * * * * * * 4481 0 0 L 29 * * * * 5483 * * 4688 * 200 * * * * * * * 3868 * * 29 0 * * * * * * 4481 0 0 K 30 * * * * * * * 3869 214 * * * * * 4385 * * 5524 * * 30 0 * * * * * * 4481 0 0 R 31 * * 4240 4432 * 4866 * 4272 2207 5198 5294 4250 * 4939 1424 5760 * 5318 * 4506 31 0 * * * * * * 4481 0 0 E 32 2560 * * 1558 6147 6705 * * 3427 2227 * * * 3795 4146 4963 * * * * 32 0 * * * * * * 4481 0 0 I 33 * * * * * * * 75 * * * * * * * * * 4306 * * 33 21 * 6147 * * * * 4481 0 0 I 34 2240 4787 * * 4190 * * 2014 4865 3981 2825 * * * 5752 4079 5580 3322 * 6350 34 0 * * * * 0 * 4490 0 1000 Q 35 3748 * 5402 1605 * 6640 * * 4305 3328 6811 4158 * 2812 3701 4739 3451 * * * 35 33 5483 * 3322 152 * * 4481 1000 0 E 36 4374 * * 3439 * * 3578 * 2428 * * 5950 * 1619 3590 3978 3714 5283 * * 36 86 5193 5046 2585 263 * * 4481 1000 0 N 37 3517 5737 5699 3052 * * * * 1581 * * 2495 * 5761 3060 4145 5314 5476 * * 37 0 * * * * * 0 4325 0 1000 K 38 * 5737 * 5177 5262 2384 4489 * 1490 * * 3598 * 3921 2897 4250 * * * * 38 74 5476 5177 2585 263 * 0 4325 1000 1000 L 39 * * 4793 * 6707 * 4507 4242 5163 584 3165 * * * 5423 * 5182 * * * 39 274 4715 2888 2054 398 922 1082 4352 1624 1664 G 40 3802 4123 4132 * * 767 * * 5249 * * 5943 5868 * 5309 3508 5006 * * 5492 40 0 * * * * 169 3179 4284 0 2970 D 41 * * 3004 * 4810 5874 5181 5739 1755 3736 6074 4147 * * 2764 2875 6388 4712 * * 41 45 * 5027 * * * 0 4475 0 1000 G 42 3294 5691 2557 3286 * 1537 * 5867 * * * 6041 * 4802 * 3066 4449 5142 * * 42 156 3647 5475 1744 512 0 * 4475 1813 1810 T 43 4680 * 4834 6088 * * 4034 5928 2677 3568 6158 6318 4205 4581 3548 4048 1851 5514 * 5285 43 57 5911 5499 2000 415 0 * 4468 1000 1000 D 44 4156 * 802 3260 5928 * * * 4281 5261 * 3504 * * 5716 5938 4362 * * * 44 152 3950 4822 470 1848 0 * 4462 2086 1000 F 45 * 3572 * 3805 887 * * * * 2972 6354 5904 * * 5408 4659 * 4154 * 5157 45 34 5408 * 2585 263 0 * 4401 1000 1000 Q 46 * * 784 2748 * 5459 * * * 5217 * 4379 * 4239 * 5596 3564 6099 * * 46 0 * * * * * * 4484 0 0 L 47 * * * * 4361 * * 3440 * 297 * * * * * * * 4463 * * 47 40 5200 * 2585 263 * * 4484 1000 0 K 48 3865 5084 * 5443 6352 6820 4219 5484 3290 3487 6573 * * 2824 3738 3062 4001 2462 * * 48 0 * * * * * * 4484 0 0 I 49 * * * * 4021 * * 1358 * 1612 * * * * * * 5200 2366 * * 49 0 * * * * * * 4484 0 0 Y 50 * 5459 * 4081 3232 * * * 4299 6099 * * * 4227 * 3403 2097 4888 * 1596 50 28 5686 * 0 * * * 4484 1000 0 N 51 6224 * 1502 * * * 4532 * 5996 * * 985 * 5686 * 4317 * * * * 51 60 6075 5279 1585 585 * * 4484 1000 0 P 52 909 * 3607 3841 * 5514 * * * * * 4563 4048 * 4822 3388 5296 4855 * * 52 21 6127 * 0 * 0 * 4473 1000 1621 D 53 5200 * 2187 3551 * * 4801 * * * * 3481 * 1357 5459 6011 3653 4856 * * 53 0 * * * * * * 4484 0 0 T 54 5686 * 6542 4323 * * * * 5217 * * 4307 6179 4496 7051 2666 691 * * * 54 0 * * * * * * 4484 0 0 E 55 6101 * 4059 4237 * 1628 * * 2368 5766 * 2197 5217 4438 6785 4772 * * * * 55 0 * * * * * * 4484 0 0 E 56 5686 * 5623 664 * * 4867 * 3946 * * 4732 * 3291 4063 * * 6011 * 6075 56 31 5542 * 2322 322 * * 4484 1000 0 E 57 5316 * 4521 693 * * * * * * * * 4580 4776 5524 5542 5001 2644 * * 57 60 4623 * 1987 419 * * 4484 1490 0 Y 58 * * * * 4506 * * 3846 * 3834 * * 5341 * * 5542 * * * 377 58 39 5217 * 1000 1000 * * 4484 1000 0 D 59 5004 * 2452 3793 * * * * 2333 3397 * 4479 4323 4295 4791 3480 4405 3298 * * 59 36 5341 * 1000 1000 * * 4484 1000 0 D 60 * * 487 6101 * 3528 * * 5778 4666 * 4313 * 6075 * * 5542 * * 4614 60 43 * 5084 * * * * 4484 0 0 D 61 * * 922 1463 * * * * * * * * * * * 3513 5507 * * * 61 77 * 4259 * * 0 * 4330 0 1000 A 62 3231 * 3169 * * 4326 * * 3741 5704 * 1888 * 4120 * 2845 3452 * * 3639 62 78 * 4255 * * 709 1365 4453 0 1772 F 63 2815 5192 4463 2157 3375 * * 5091 * 5461 3561 * 3998 4216 * 6124 3120 4054 * 5514 63 53 * 4798 * * 0 * 4392 0 1720 V 64 * 5514 * * 4739 * * 3368 4300 1265 3640 * * 3764 4693 * 6299 2541 * * 64 0 * * * * 0 * 4401 0 1000 I 65 * * * * * * * 447 * 3448 * * * * * * * 2744 * 5289 65 38 * 5258 * * * * 4484 0 0 P 66 4154 * * 5075 * * 4200 * * * 5921 4846 549 * * 5509 4799 * 4672 5171 66 0 * * * * 0 * 4337 0 1000 R 67 5009 * * * * 5185 * 5309 1404 * 5544 5484 * 4476 1504 4456 * 4284 * * 67 0 * * * * * * 4377 0 0 S 68 6315 * * * * 2912 4227 * * * * 925 * * * 2543 * * * 3282 68 0 * * * * * * 4377 0 0 T 69 3950 * * * * * * * * * * * * * * 882 1348 * * * 69 0 * * * * * * 4377 0 0 S 70 4854 4872 * * * * 5544 * * * * * * 5538 2601 892 3037 * * 3989 70 0 * * * * * * 4377 0 0 V 71 * * * * * * * 3424 * 2313 * * * * * * * 503 * * 71 0 * * * * * * 4377 0 0 I 72 * 4869 * * 5009 * * 1046 * 1918 * * * 6380 * * 5554 2713 * * 72 0 * * * * * * 4377 0 0 V 73 2738 * * * * * * 2076 * 4357 * * * * * * * 826 * * 73 0 * * * * * * 4377 0 0 K 74 5205 * * 4245 * * 5357 5676 2090 * * 4223 * 3281 1400 4505 5185 * * 4864 74 0 * * * * * * 4377 0 0 R 75 * * * * * * * * * * * * * * 0 * * * * * 75 0 * * * * * * 4377 0 0 S 76 * * * * 5489 * * 1876 5125 2918 5208 * * * 5616 4129 * 1185 * * 76 0 * * * * * * 4284 0 0 P 77 5301 * * * * * * * * * * * 37 * * * * * * * 77 51 6173 5564 1000 1000 * * 4065 1000 0 A 78 1740 4976 * * * 3139 * 3223 * * 5560 * 3406 * 2609 3745 * 3408 * * 78 193 2995 * 1581 587 * 0 3847 2070 1000 I 79 3566 * * 3670 * * * 5600 4403 3919 4006 4493 5001 3506 5570 2519 3260 2497 * * 79 414 2390 4088 1610 573 0 * 3741 1848 1000 K 80 4127 * * * * * * * 1761 * * 4767 * * 789 * * * * 4959 80 183 3066 * 1725 520 0 * 3454 1650 1000 G 81 * * 4339 * * 620 * * * * * 3861 4485 * * 2422 * * * * 81 0 * * * * * * 3448 0 0 N 82 * * * 4837 * 4121 * * 5030 * * 2723 * 2582 3130 3480 2058 3126 * * 82 65 4497 * 1000 1000 * * 3405 1000 0 A 83 353 * * * * 4148 * * * * * 4277 * 3824 * 4708 * * * * 83 0 * * * * * * 3285 0 0 T 84 1206 * * * * 4575 * * 4342 * * * * 3709 3893 1780 4633 * * * 84 0 * * * * * * 2980 0 0 R 85 * * 4104 * * * * * 3766 4439 4381 4453 * * 587 * 3995 * * * 85 0 * * * * * * 2771 0 0 Y 86 * * * * 3438 3116 * * * * * * * * * * * * * 336 86 0 * * * * * * 2690 0 0 V 87 * * * * * * * 2686 * 4195 * * * * * * * 340 * * 87 0 * * * * * * 2690 0 0 T 88 1788 * * * * * * * * * * * * * * 1629 1369 * * * 88 0 * * 0 * * * 2071 0 0 //