HHsearch 1.5 NAME c6humE_ FAM FILE c6humE_ COM /bmm/www/servers/phyre2/HH/hhmake -i c6humE_.a3m DATE Sat Jan 12 08:11:59 2019 LENG 100 match states, 100 columns in multiple alignment FILT 102 out of 222 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.6 EVD 0.4784 0.5894 SEQ >ss_dssp CCHHHHHHHHHHHHHHHHHHHHHCSSSTHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCGGGCCCCC >sa_dssp EDCEECCEDADDCDEDADECDEDBDDCDEBCEBCCDCCDADBDCCDBDAEDEDDEEDECDDEBEECEDEBEDECEECDEECEDCEEEDECCCDEDDEEEE >ss_pred CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCC >ss_conf 9378999999999999999999833099999999999999999999997203877854389999999999999999999999999972898889985169 >Consensus mxlxxxlxxaxxLfxiGlxgxlxxRnlixxlixlelmxxavnlxxixxxxxxxxxdpxgqxlxlxxIvIaxaexAvxLaixixxyrxxgtxdxdxxxxLk >c6humE_ MQLTYVLILAALLFCIGIYGLVTSRNAVRVLMSIELLLNAVNLNLIGFANYLDGQQIKGQVFAVFVITVAAAEAAVGLAIILAIYRNRDTVDMEKFNLLK >UniRef50_B8DS09(3-101:104) NADH-ubiquinone oxidoreductase chain 4L n=6 Tax=Desulfovibrionales RepID=B8DS09_DESVM E=5e-06 s/c=0.53 id=29% cov=100% -PLVLYQLASLVLLGAGLAGLVKRRTLVGMLIAVELMLNGAGLSIVAATQLTGADPALGQLATLLVMGLAAAEATVALAAIVVVFRRFGTTRTDALATLR >UniRef50_A1RZ54(16-99:101) NADH-ubiquinone oxidoreductase, chain 4L n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RZ54_THEPD E=3e-06 s/c=0.63 id=28% cov=85% -------------FGIGALGAVVSRSVVKVMISLEIMFNGVLLALLTLASMGNP--LVGYTLSLFAIALSSVEVGLLVSVFILLYRRTRSLDVYEIPGL- >UniRef50_Q1RHS2(4-108:111) Multisubunit Na+/H+ antiporter, MnhC subunit n=3 Tax=Rickettsia RepID=Q1RHS2_RICBR E=0.0004 s/c=0.44 id=20% cov=91% -------FFALILLTSGLFIMLTSHNYIHKVIGLGVFQSSVLVFYLALGKVKTGivpimqegvttyTSPLPHVLMLTAIVVGFATLSVALSLIYQIYKHF GTISENEIS--- >UniRef50_B2KDU0(16-113:114) NADH-ubiquinone oxidoreductase chain 4L n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KDU0_ELUMP E=8e-08 s/c=0.59 id=26% cov=99% -NLYLNWFTAVLLFFIGVYCMAGSRNMLRTLIGIEISSKGCMFALLSAGYAIGNIDLA-QALIMIMIGFEVVVVAVGLGLIIRSYNQKGNLDILDLKNLR >UniRef50_Q07ZI4(3-92:102) NADH-ubiquinone oxidoreductase, chain 4L n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q07ZI4_SHEFN E=3e-05 s/c=0.55 id=24% cov=89% -NIYLYALLGVGLFILGIYSLIVYANLLRKILAINVMCTGVFLVLVSLASRNHNvqPDPVPHAMVITGIVVAVSATALALILMLKINKAIG--------- -- >UniRef50_A0AEC1(1-113:286) Putative membrane protein n=6 Tax=Streptomyces RepID=A0AEC1_STRAM E=6e-14 s/c=0.69 id=19% cov=99% MTVSLSLLVSAAVLAAVGATLLLTRSLTRILLGAVVLGNGVNLLVLASTGSAGEApllypnvirnrvtDPLPQAIALTAIVITLATTAFLLAMAYRSHQV TGSDEISDDTE-- >UniRef50_C7Q1G7(1-121:122) NADH-ubiquinone oxidoreductase chain 4L n=2 Tax=Actinomycetales RepID=C7Q1G7_CATAD E=1e-10 s/c=0.56 id=27% cov=100% MIVVNYLA-SAALFCLGLYTVLTRRNMIKMVMGLSLMESSTYVLFISMAYRSGStapvlvdppkgrspeqlaagnvADPVLQNFCLTAIVIGVAVTAVFL SVVVRIAQHRRTLDADRVRELR >UniRef50_C0XU59(2-87:140) Monovalent cation/H+ antiporter subunit C n=1 Tax=Corynebacterium lipophiloflavum DSM 44291 RepID=C0XU59_9CORY E=7e-05 s/c=0.57 id=23% cov=39% -----ILALSVGILMAGAVYLMMRPDMFRITIGFVMLSHAANL--------------------------------------------------------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * 1485 * 3702 1177 * * * * * * 3017 * * 1 0 * * * * * * 4857 0 0 Q 2 5455 * 5167 5502 * 4293 4510 4358 5606 * * 3123 1613 6409 * 2799 2809 5426 * * 2 0 * * * * * * 5048 0 0 L 3 5368 * * * 5289 * * 3529 * 1068 3466 * 5466 * * 5882 4187 2400 * 6378 3 0 * * * * * * 5264 0 0 T 4 3460 * 4514 3723 * 5389 4836 5797 * 3867 6319 3129 5247 4799 * 3013 2668 4411 6551 3106 4 0 * * * * * * 5318 0 0 Y 5 5239 * * 6165 2870 5162 2854 5553 * 2128 * 3757 * 6310 * 4927 3862 5814 4072 2826 5 26 5782 * 0 * * * 5352 1000 0 V 6 4370 5246 * * 3885 4851 * 4018 * 2631 5960 5527 5160 6111 * 4601 6385 3068 * 1526 6 0 * * * * * * 5412 0 0 L 7 5287 * * * 2870 * 6180 3363 * 813 * * * 6252 * * 4335 4424 5552 5225 7 0 * * * * * * 5411 0 0 I 8 2837 5376 * * 2780 * * 2012 * 2415 6581 * * * * * 4076 2644 * 5308 8 18 * 6323 * * * * 5439 0 0 L 9 4570 * * * 3807 * * 3215 * 1609 * * * * * 5833 2934 1725 * * 9 20 * 6160 * * 0 * 5429 0 1000 A 10 1384 5178 * * 5594 3170 * 5278 * 5898 5145 * 6743 * * 1673 4904 5043 * * 10 33 6198 6812 0 * 0 * 5454 1000 1000 A 11 1925 * * * 3319 2473 * 2955 * 3474 5116 * * * * 5294 3650 3273 * * 11 0 * * * * * 0 5488 0 1000 L 12 2399 4922 * * 5599 3370 * 2166 * 2089 5458 * * * * * 5854 2765 6065 * 12 17 * 6405 * * 0 * 5529 0 1000 L 13 5907 * * * 5555 * * 4273 * 476 3077 * * * * * * 3782 * * 13 23 * 5973 * * 0 * 5514 0 1000 F 14 * * * * 669 * * 4089 * 3234 4457 * * * * 5169 5399 3390 * 6183 14 0 * * * * 0 * 5528 0 1509 C 15 2168 4188 * * 3254 2618 * 4793 * 3641 5808 * * * * 3022 3864 3449 5313 6344 15 0 * * * * * * 5543 0 0 I 16 2972 5524 * * 4383 6271 * 1426 * 2418 4223 * * * * 4939 5620 3008 * * 16 0 * * * * * * 5574 0 0 G 17 4929 6311 * * * 102 * * * * * * * * * 6650 * 6270 * * 17 0 * * * * * * 5620 0 0 I 18 3643 * * * 4421 4474 * 2503 * 1140 5871 * * * * 5590 4653 3054 * * 18 0 * * * * * * 5620 0 0 Y 19 3437 7107 * * 3329 6046 * 3049 * 3324 5785 * * * * * 6390 3725 4676 1250 19 117 * 3679 * * * * 5620 0 0 G 20 3974 4214 * * * 681 * 4268 * * 5193 6720 * * * 6404 3539 6253 * 4087 20 13 6749 * 0 * 0 * 5574 1000 2584 L 21 3080 * * * 3710 * * 3146 * 1713 3483 * * * * 5452 6326 1929 * * 21 29 5643 * 0 * * * 5620 1460 0 V 22 3640 6218 * * 4086 6917 * 3124 * 1506 2510 * * * * * 4699 2660 * * 22 0 * * * * * * 5625 0 0 T 23 3422 * * * 5704 6167 * 3341 5479 2437 4668 4024 * 6732 5242 3615 2276 2967 * 6043 23 16 6492 * 0 * * * 5625 1000 0 S 24 5181 * 5413 5321 * 6318 4193 6523 2830 * * 4158 * 3787 1437 2534 5345 * 6645 * 24 12 6937 * 0 * * * 5636 1000 0 R 25 6318 * 6523 * * * 6387 * 2238 * * * 7101 5155 607 4352 6399 * * * 25 71 4385 * 0 * * * 5636 2390 0 N 26 6337 * 4115 6974 * * 4927 * * 6383 * 607 * 6251 * 2769 5005 5088 * * 26 21 6121 * 0 * * * 5636 1000 0 A 27 3273 * * * 3759 6962 * 2829 * 1307 2679 * * * * * * 3296 * 6397 27 18 * 6354 * * * * 5633 0 0 V 28 5508 * * * 4804 * * 1283 * 1927 5458 * * * * * 4731 2267 * * 28 0 * * * * 0 * 5621 0 1000 R 29 4895 * * * 4118 4884 5252 3398 2155 4185 3558 * 6354 * 2026 6386 4453 3923 * 6941 29 0 * * * * * * 5633 0 0 V 30 4344 * * * * 6791 * 2406 3179 3367 2379 * * 6551 6323 6375 4816 1822 * * 30 0 * * * * * * 5633 0 0 L 31 * * * * 3333 * * 2337 * 1154 3858 * 5509 * * * 7104 2770 * 6838 31 0 * * * * * * 5633 0 0 M 32 * * * * 4023 6120 * 1571 * 1991 1828 * * * * * * 4201 * * 32 0 * * * * * * 5633 0 0 S 33 3586 3067 * * * 1170 * * * * 6239 * * * 5509 1653 * * * * 33 0 * * * * * * 5633 0 0 I 34 4536 * * * 4362 * * 2071 * 1528 4096 * 5509 * * 6202 4358 2468 * * 34 0 * * * * * * 5633 0 0 E 35 5215 * 5515 748 * 4533 * * * 6393 4799 3586 * 6056 * 3508 4606 4740 * * 35 0 * * * * * * 5633 0 0 L 36 6134 * * * 4624 * * 1766 * 1334 3725 * 5509 * * * 6517 2777 * * 36 0 * * * * * * 5633 0 0 L 37 5630 6120 * * 4006 * * 2402 * 2359 1275 * * * * 6163 5428 3865 * * 37 0 * * * * * * 5633 0 0 L 38 5317 * 5069 4007 3733 3113 * 4188 * 1453 4688 6304 5509 3773 * 3929 4431 6227 * * 38 0 * * * * * * 5633 0 0 N 39 4035 * 6239 6529 * 4751 3901 * 5249 3414 6056 1215 * 5408 * 3221 3896 7092 * 4652 39 0 * * * * * * 5633 0 0 A 40 1033 * * * * 1726 * * * * * * * * * 2259 * * * * 40 0 * * * * * * 5633 0 0 V 41 1848 5005 * * * * * 2631 * 5089 * * * * * 5020 3944 1305 * * 41 0 * * * * * * 5633 0 0 N 42 4582 * 6436 * 4951 5106 5708 2916 * 3384 4807 1066 * * * 5143 5596 4741 * 4710 42 12 6906 * 0 * * * 5633 1000 0 L 43 6292 * * * 3795 * * 2806 * 765 4342 * * * * 5477 * 3157 * * 43 20 * 6191 * * * * 5633 0 0 N 44 2603 * * 6018 2380 5806 * 4278 * 2696 6383 2784 * * * 3246 4518 3723 6710 6297 44 22 * 6018 * * 0 * 5648 0 1000 L 45 4820 * * * 1583 * * 2810 * 1426 4853 * * * * * * 5423 6670 4368 45 0 * * * * 0 * 5594 0 1000 I 46 3187 5434 * * 4792 6295 * 1819 * 2427 6756 * * * * * 6339 1612 * * 46 0 * * * * * * 5621 0 0 G 47 1604 6466 * 6254 4746 3230 * 4577 * 3463 * * * * * 2416 2666 5308 * * 47 17 6376 * 3585 126 * * 5621 1000 0 F 48 2519 * * * 1818 5764 * 3106 * 2929 4956 * * * * 3361 3940 5969 6287 4248 48 19 * 6224 * * * * 5621 0 0 A 49 2151 * 6004 * 6279 1209 * 5985 * 6894 6189 5165 * * * 2705 4781 6051 4530 * 49 9 * 7300 * * 0 * 5596 0 1000 N 50 3344 * 5842 * 4773 3482 5508 * 4478 4966 7136 3878 6050 4610 2875 3241 6170 5085 5531 2178 50 32 7030 6124 1585 585 * 0 5626 1000 1000 Y 51 4907 5457 * 6908 2925 6357 4422 4172 5135 3062 5114 * * 5861 2525 4016 4440 3945 6359 2872 51 132 4292 4769 3921 99 1539 608 5615 2315 1852 L 52 4108 * 5171 3898 4942 5830 3853 6092 4301 2216 5767 6115 5599 5380 5551 3549 3352 4538 3465 4987 52 164 5504 3546 3281 157 2547 271 5604 1734 2581 D 53 3589 * 2871 5158 4879 1394 5377 * 5480 * 6192 3320 4354 6180 5447 4256 6215 * 6634 5962 53 344 3838 2815 3429 141 1906 448 5624 2731 3420 G 54 2364 * 4101 5054 6207 2377 4865 6200 6555 4439 6189 3086 3199 5333 6633 3507 * 6211 * 5059 54 267 2741 5682 3868 102 1183 837 5576 3320 3918 Q 55 1800 * 4944 4414 * 7060 5197 4655 5147 5866 * 5893 4687 3721 4226 3970 3123 3079 * 4978 55 352 2904 3592 3607 124 348 2221 5576 3321 3705 Q 56 4677 * 1094 4983 * 4514 5550 6027 * 6804 * 2875 5622 3543 * 3856 4747 * 6461 6456 56 89 5272 4874 3471 136 896 1112 5576 1912 3394 I 57 4824 * * 6459 5468 5682 * 3188 * 2852 4261 * 1054 * 6941 7121 6909 4388 6432 4440 57 0 * * * * 801 1230 5568 0 3155 K 58 3957 * 3260 4350 6328 4154 * 4250 7488 1891 6612 5835 6395 5682 4979 3734 3353 3035 * * 58 62 * 4564 * * 0 * 5583 0 2048 G 59 5356 6429 * * 6000 1025 * * * 6655 6060 * 1356 * * 6428 * 5082 * * 59 0 * * * * 638 1485 5547 0 2082 Q 60 4363 6450 * 4403 5453 6624 3703 6425 * 4722 6678 * * 706 6040 4446 * 5750 * 5016 60 0 * * * * 0 * 5592 0 1000 V 61 1388 6466 * * 6434 4508 * 2933 * 4230 5007 6700 * * * 3895 4970 2138 * * 61 0 * * * * * * 5621 0 0 F 62 4411 * * * 2051 * * 3766 * 1096 3109 * * * * * 6133 5361 6947 7013 62 0 * * * * * * 5621 0 0 A 63 2135 6700 * * 6193 * * 2681 * 4427 3954 * 5332 * * 3460 3213 2053 * 5831 63 0 * * * * * * 5621 0 0 V 64 * * * * 3878 * * 2457 * 741 5110 * * * * * * 3225 * 5988 64 0 * * * * * * 5621 0 0 F 65 * * * * 1797 * * 4247 * 3865 4907 * 5494 * * * 1186 4168 6884 4982 65 0 * * * * * * 5621 0 0 V 66 1740 6224 6119 * * 5303 * 2136 * 5296 6156 6868 * * * 3014 5854 2113 * * 66 14 * 6688 * * * * 5621 0 0 I 67 * * * * * * * 570 * 3138 3418 * * * * * 4418 4039 * 6408 67 0 * * * * * 0 5617 0 1000 T 68 2241 6377 * * * 3862 * 6230 * 6046 * * * * * 4633 2611 1074 * * 68 0 * * * * 0 * 5617 0 1000 V 69 4194 * * * 5145 * * 970 * 3001 6200 * * * * * * 1899 * * 69 0 * * * * * * 5621 0 0 A 70 1106 * 6377 4900 * 1785 * * * * 4897 * * * * 3243 4041 * * * 70 0 * * * * * * 5621 0 0 A 71 1325 * * * 2843 4932 * 4651 * 3476 5281 * * * * 3762 4100 2823 * * 71 0 * * * * * * 5621 0 0 A 72 886 3350 * * * 3878 * 6763 * 5169 * * * * * 3040 4843 3333 * * 72 0 * * * * * * 5621 0 0 E 73 * * 6789 827 * 6295 * 5626 * 4453 4719 * * * * 5536 3056 2565 * * 73 0 * * * * * * 5621 0 0 A 74 2213 * * * 6486 * * 4251 6682 3873 3841 6230 * 4770 * 3864 1944 2363 * * 74 0 * * * * * * 5621 0 0 A 75 508 6643 * * * 4399 * 4795 * 6312 * * * * * 3327 4768 4195 * * 75 0 * * * * * * 5621 0 0 V 76 5988 * * * 3436 * * 2195 * 1994 5389 * * * * * 5494 1410 * * 76 0 * * * * * * 5621 0 0 G 77 1979 * * * 4595 1310 * 5487 * 3035 3365 * * * * 5678 * 4621 * * 77 0 * * * * * * 5621 0 0 L 78 4226 * * * 4078 * * 3508 * 581 5012 * * * * 4921 * 3899 * * 78 0 * * * * * * 5621 0 0 A 79 875 * * * * 2984 * * * 5988 5385 * 6688 * * 2843 4109 3613 * * 79 0 * * * * * * 5621 0 0 I 80 6698 * * * 4857 6287 * 1480 * 1396 3975 * * * * 6200 * 3132 * 6230 80 0 * * * * * * 5621 0 0 I 81 1969 5686 * * 4461 6377 * 2058 * 2869 6763 * * * * 6224 4686 2188 * 6643 81 18 6304 * 2000 415 * * 5621 1000 0 L 82 5472 * * * 4986 * * 1797 * 2478 4193 * 5494 * 5748 6769 4655 1798 * 4423 82 0 * * * * * * 5621 0 0 A 83 2576 * * 6710 * 5310 5567 5553 4574 2552 5600 4101 * 3917 2143 4309 5768 3765 6380 5895 83 0 * * * * * * 5656 0 0 I 84 3154 * * * 3769 6568 5534 2331 * 2104 5270 5465 * 6252 6365 3878 4438 3727 5661 3887 84 0 * * * * * * 5634 0 0 Y 85 5066 * * 6489 2161 * 3148 6062 4775 * * * * 7179 5408 5459 * 4803 * 1053 85 0 * * * * * * 5634 0 0 R 86 5373 * * 4856 7019 * 5301 * 2477 6317 * 4676 * 3694 787 6710 * 6546 * * 86 0 * * * * * * 5623 0 0 N 87 3815 * 6252 3915 6461 5449 3242 4976 3080 4068 4818 3303 * 4213 2826 3457 4576 5507 * 6234 87 0 * * * * * * 5623 0 0 R 88 4302 * * 6233 3582 5282 3341 * 2727 3959 6682 * * 5832 2283 5375 3447 6383 * 2715 88 0 * * * * * * 5596 0 0 D 89 6250 * 6012 5812 * 1049 4811 6233 3258 * * 4717 6220 3634 3046 3973 * * * * 89 0 * * * * * * 5596 0 0 T 90 4451 6458 4920 5962 * * 5448 5684 5676 * * 3874 * 6233 6170 1663 1277 6945 * * 90 0 * * * * * * 5596 0 0 V 91 6116 * 3058 5844 5204 * * 2217 * 1694 * 6963 6261 * * 6886 3685 2400 * * 91 0 * * * * * * 5596 0 0 D 92 6736 * 988 3395 6283 * 5589 5957 7252 * 5403 2956 * 5143 4100 3767 * * * 5462 92 0 * * * * * * 5581 0 0 M 93 4094 * 6230 4980 * 6464 * 2478 * 3075 4423 * 4711 6404 * 5220 2791 1713 6161 * 93 0 * * * * * * 5601 0 0 E 94 5212 * 1113 2000 * 6261 * * 5495 5084 * 4846 * 6968 4297 4359 5425 * * 5046 94 0 * * * * * * 5604 0 0 K 95 3519 * 2734 2461 5592 * * * 2557 5730 6445 4127 * 3648 3899 3542 4827 5692 * 6027 95 0 * * * * * * 5581 0 0 F 96 3425 * 5883 * 3439 * 6169 1851 * 1950 3438 * * * * 5365 * 3710 6255 4576 96 0 * * * * * * 5520 0 0 N 97 4839 * 3482 5906 * 6878 * 6418 3405 * * 2383 6593 4678 1869 3223 3172 6463 * * 97 0 * * * * * * 5459 0 0 L 98 4734 * 4180 1719 * 4586 * * 5539 2879 4312 4285 5634 5716 3497 3408 3629 * * * 98 0 * * * * * * 5307 0 0 L 99 5389 * * * 5839 * * 6090 * 427 2506 * * * * 5383 * * * * 99 0 * * * * * * 5126 0 0 K 100 * * * * * * * * 935 * * * * * 1068 * * * * * 100 0 * * 0 * * * 4812 0 0 //