HHsearch 1.5 NAME c6gy4B_ FAM FILE c6gy4B_ COM /bmm/www/servers/phyre2/HH/hhmake -i c6gy4B_.a3m DATE Sat Jul 21 08:25:21 2018 LENG 80 match states, 80 columns in multiple alignment FILT 15 out of 19 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.8 EVD 0.4352 1.2325 SEQ >ss_dssp CEEEEEEECCHHHHHHHHHHHTTSCCCCHHHHHHHHHTCEEECCCHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHCTTC >sa_dssp EECEDDBEACDECADECCEDCEEEDEECCAEDBCEEBEBEBDDCDCEEBEEECCDADACCDEECABDACEDACEDACDDE >ss_pred CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCC >ss_conf 94036568749999999716776315899999985039799824433112559807884139999999999999742469 >Consensus xxxEerfrVDRkkLExmlxxxxxxxxexfFxxImxxtxtxvxWPsxLKIGAKDPhVkVxGrxexVxxAkxxIlsvLxtkx >c6gy4B_ SMSEERFRVDRKKLEAMLQAAAEGKGRDFFQKIMEETNTQIAWPSKLKIGAKDPHIKVSGKKEDVKEAKEMIMSVLDTKS >UniRef50_UPI000186D5F8(75-159:893) bicaudal-C, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186D5F8 E=2e-23 s/c=1.28 id=50% cov=95% ----DRFRIDRKKLEDMIMSDNDAldATQAFFQRIMEGSGTHIAWPTRLKIGAkskKDPHVRVAGRSlQDIQTAKDTILSALGIR- >UniRef50_B4MAG0(53-132:661) GJ15905 n=1 Tax=Drosophila virilis RepID=B4MAG0_DROVI E=1e-22 s/c=1.34 id=44% cov=96% ----ESFKVQRHWLEQLLRKEGLSGARVFFESIMSRTRTYVCWPSRLKIGAKsrrDPYVRvVGGSSEQVIRAKQRILSRLEERA >UniRef50_Q21593(15-100:644) Protein M7.3, partially confirmed by transcript evidence n=4 Tax=Caenorhabditis RepID=Q21593_CAEEL E=3e-21 s/c=1.19 id=39% cov=96% ---EQKIQVDRRKLESMITGRIDNtshqlpTAESFFANVMSYSNAEVIWPSQLKIGAktkKDPYVKVIGSIEQIESARTLVLNSLQIK- >UniRef50_A8Q1E6(32-117:714) Bicaudal-C, putative n=1 Tax=Brugia malayi RepID=A8Q1E6_BRUMA E=2e-20 s/c=1.16 id=44% cov=96% ---EGQIQVDRKRLESMITGEPlygsekfLPSAEEFFQKVTELSGAVISWPSRLKIGAktkKDPYVKMFGTVEQVNCARQLIASTLRIK- >UniRef50_Q24009(85-169:905) Protein bicaudal C n=13 Tax=Drosophila RepID=BICC_DROME E=4e-25 s/c=1.35 id=49% cov=95% ----ERFKVDRQKLEQLIKAESSiegmNGAEYFFHDIMNTTDTYVSWPCRLKIGAkskKDPHVRIVGKVDQVQRAKERILSSLDSR- >UniRef50_A9V9A3(815-894:1487) Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9V9A3_MONBE E=4e-16 s/c=1.07 id=34% cov=92% -LVEDRVRIERRTLEYVLQ------GEHVFDAIARKHGIQaVTVDRNFKIGArskKDPTIRILARSDqgaQMLAARQEILRICDTRS >UniRef50_Q4REA0(46-161:1324) Chromosome undetermined SCAF15132, whole genome shotgun sequence. (Fragment) n=6 Tax=Eumetazoa RepID=Q4REA0_TETNG E=3e-12 s/c=0.63 id=56% cov=80% ----------------LLETASSGISGWVYNQIMDETQTHIAWPSKLKIGAKskkatrsgwratfqeveeeeasrhhpdsshclygvfrcweskpaefsv lpvaaDPRIKVCGRRENVREAIDRIMSVLNPK- >UniRef50_C3XQB4(1-187:382) Putative uncharacterized protein (Fragment) n=2 Tax=Chordata RepID=C3XQB4_BRAFL E=9e-82 s/c=0.57 id=59% cov=101% DWVEERFRVDRRKLEAMLQAAAEGRgqtGEEFFEKVSmnDDSNSRLQWgPMQLAVeifsSFTDPHIKVAGREEDVRAAKTKIMAVLDTKS >UniRef50_UPI0000D56EC4(37-225:744) PREDICTED: similar to bicaudal-c n=1 Tax=Tribolium castaneum RepID=UPI0000D56EC4 E=2e-77 s/c=0.61 id=54% cov=101% DLYQDRFRVDRKKLEQMLSGDNDAliPADVFFANIMEDTDTYITWPNKLKLGAkskKDPHVRIAGKEEDVKAAKDRIMTVLYTRC # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * S 1 * * 880 1689 * * * * * * * * * * * 2771 * * * * 1 0 * * * * * * 1876 0 0 M 2 * * * * * * * * * 1449 3120 * * * * 3077 * * 1322 * 2 0 * * * * * * 2169 0 0 S 3 * * * * * * * * * * * * * * * 3120 2915 750 * 2666 3 0 * * * * * * 2169 0 0 E 4 * * * 152 * * * * * * * * * 3326 * * * * * * 4 0 * * * * * * 2554 0 0 E 5 * * 1869 891 * 3420 * * * * * * * 3417 * * * * * * 5 0 * * * * * * 2808 0 0 R 6 * * * * * * * * 3417 * * * * 3420 461 3535 * * * * 6 0 * * * * * * 2808 0 0 F 7 * * * * 553 * * 2418 * * * * * * * * * 2928 * * 7 0 * * * * * * 2808 0 0 R 8 * * * * * * * * 2648 * * * * 2418 614 * * * * * 8 0 * * * * * * 2808 0 0 V 9 * * * * * * * 1622 * * * * * * * * * 567 * * 9 0 * * * * * * 2808 0 0 D 10 * * 354 2928 * * * * * * * * * 3535 * * * * * * 10 0 * * * * * * 2808 0 0 R 11 * * * * * * * * * * * * * * 0 * * * * * 11 0 * * * * * * 2808 0 0 K 12 * * * * * * 3535 * 1058 * * * * 3772 1473 * * * * * 12 0 * * * * * * 2808 0 0 K 13 * * * * * * * * 538 * * * * * 3420 * 2928 * 3535 * 13 0 * * * * * * 2808 0 0 L 14 * * * * * * * * * 0 * * * * * * * * * * 14 0 * * * * * * 2808 0 0 E 15 * * * 0 * * * * * * * * * * * * * * * * 15 0 * * * * * * 2808 0 0 A 16 2719 * 3677 * * * * 2897 * * * 4165 * 1935 * 2418 * * * 2928 16 0 * * * * * * 2808 0 0 M 17 * * * * * * * * * 2246 594 * * * * * * 2980 * * 17 81 4192 * 4087 87 * * 2844 1000 0 L 18 * * * * * * * 1621 * 567 * * * * * * * * * * 18 0 * * * * * * 2844 0 0 Q 19 * * * 3136 * * * * 3855 * 3736 * * 1701 3597 4026 2466 * * 3191 19 195 * 2980 * * * * 2844 0 0 A 20 1280 * * * * 1858 * * 3393 * * * * * * 3528 2937 * * * 20 0 * * * * * 0 2615 0 1000 A 21 1767 * 2666 1850 * * * * * * * * 2973 * 3291 * 4582 * * * 21 0 * * * * * 0 2615 0 1000 A 22 2616 * 4582 * * 3393 * 3291 * * * 2189 3283 * * 2251 3930 * * * 22 156 3283 * 2807 222 * 0 2615 1000 1000 E 23 * * 1945 2128 * * * * * 1945 * 4582 * * * 2251 * * * * 23 119 3653 * 2000 415 * 0 2615 1000 1000 G 24 2164 * * * * 1332 * * * * * 2461 3283 * * 3393 * * * * 24 568 1620 * 1769 501 * 0 2615 1964 1000 K 25 3528 * * * * 2517 * 2937 4098 * * 4017 3151 * 3255 2570 3291 * * * 25 337 2264 * 1585 585 0 * 2615 1589 1000 G 26 1343 * * * * 1262 * * * * * * * * * 3136 3736 * * * 26 0 * * * * * * 2844 0 0 R 27 * * 4026 698 * 3136 * * * * * * * 3736 2905 * * * * * 27 0 * * * * * * 2844 0 0 D 28 3736 * 4299 1767 * * 2980 * 4787 * * * * * 4192 3464 * 2796 4082 3855 28 0 * * * * * * 2844 0 0 F 29 * * * * 397 * * * * * * * * * * * * 2056 * * 29 0 * * * * * * 2844 0 0 F 30 * * * * 174 * * * * * * * * * * * * * * 3136 30 0 * * * * * * 2844 0 0 Q 31 2718 * 2980 1806 * * 3855 * 4787 * * 4082 * 2209 * 4192 * * * * 31 0 * * * * * * 2844 0 0 K 32 2980 * 3855 * * * * * 1609 * * 2718 * 3136 2965 3597 * * * * 32 0 * * * * * * 2844 0 0 I 33 * * * * * * * 700 * * * * * * * * * 1379 * * 33 0 * * * * * * 2844 0 0 M 34 2980 * * * * * * * * * 537 * * * * 3413 3468 * * * 34 142 3413 * 1000 1000 * * 2844 1000 0 E 35 * * 2268 1672 * * * * * * * 3855 * * 2082 2529 * * * * 35 0 * * * * * * 2844 0 0 E 36 * * 2385 1868 * 3736 * * 2980 3468 * * * * 3597 * 3855 * * 3464 36 0 * * * * * * 2844 0 0 T 37 * * * * * * 2980 * * * * * * * * 1515 934 * * * 37 0 * * * * * * 2844 0 0 N 38 * * 2446 * * 1775 * * * 4787 * 1777 * 3136 3597 * * * * * 38 0 * * * * * * 2844 0 0 T 39 2466 * * * * * * 2980 * * * * * * * 3413 741 * * * 39 0 * * * * * * 2844 0 0 Q 40 * * * 3464 * * 2554 * * * * * * 1549 3413 * * 3468 * 2230 40 195 2980 * 0 * * * 2844 1000 0 I 41 * * * * * * * 1226 * 3413 * * * * * * * 1063 * * 41 0 * * * * * * 2844 0 0 A 42 2061 3597 * * * * * 3464 3191 * * * * 3413 * 2648 2156 * * * 42 0 * * * * * * 2844 0 0 W 43 * * * * * * * * * * * * * * * * * 2980 195 * 43 142 3413 * 0 * * * 2844 1000 0 P 44 * * 2980 * * * * * * * * * 195 * * * * * * * 44 0 * * * * * * 2844 0 0 S 45 4787 3855 * * * * * * * * 3413 4026 * * 2980 895 3736 * * * 45 0 * * * * * * 2844 0 0 K 46 * * * * * * * * 1428 * * 2980 * 2439 1657 * * * * * 46 0 * * * * * * 2844 0 0 L 47 * * * * 2980 * * * * 195 * * * * * * * * * * 47 0 * * * * * * 2844 0 0 K 48 3413 * * * * * * * 142 * * * * * * * * * * * 48 0 * * * * * * 2844 0 0 I 49 * * * * * * * 243 * 4026 * * * * * * * 3413 * * 49 142 3413 * 2000 415 * * 2844 1000 0 G 50 * * * * * 142 * * * * * * * * * 3413 * * * * 50 0 * * * * * * 2844 0 0 A 51 142 * * * 3413 * * * * * * * * * * * * * * * 51 1632 562 * 1585 585 * * 2844 2626 0 K 52 * * * * * * * * 142 * * * * * * * 3413 * * * 52 229 2766 * 4672 58 * * 2844 1498 0 D 53 * * 0 * * * * * * * * * * * * * * * * * 53 0 * * * * * * 2991 0 0 P 54 * * * * * * * * * * * * 0 * * * * * * * 54 0 * * * * * * 2991 0 0 H 55 * * * * * * 841 * * * * * * * 3810 * 3000 * * 2027 55 0 * * * * * * 2991 0 0 I 56 * * * * * * * 1214 * * * * * * * * * 814 * * 56 0 * * * * * * 2991 0 0 K 57 * * * * * * * * 828 * * * * * 1195 * * * * * 57 110 3765 * 0 * * * 2991 1000 0 V 58 * * * * * * * 1944 * * 3563 * * * * * * 609 * * 58 0 * * * * * * 2991 0 0 S 59 2022 2969 * 3179 3563 3765 * 3158 * 3000 * * * * * 4269 * 3866 * * 59 0 * * * * * * 2991 0 0 G 60 3000 * * * * 193 * * * * * * * * * * * * * * 60 0 * * * * * * 2991 0 0 K 61 * * * * * * * * 1634 * * * * * 1209 2638 3563 * * * 61 0 * * * * * * 2991 0 0 K 62 * * * 2575 * * * 3521 4269 * * * 5326 * 2070 1853 * 2707 * * 62 118 3673 * 0 * * * 2991 1000 0 E 63 4122 * 2020 695 * * * * * * * * * 3673 * * * * * * 63 193 3000 * 1585 585 * * 2991 1000 0 D 64 * * 1510 * * * * * * * * 2251 * 1188 * * * * * * 64 0 * * * * * * 2991 0 0 V 65 * * * * * * * 2595 * * 3000 * * * * * * 495 * * 65 0 * * * * * * 2991 0 0 K 66 * * * 3521 * * * 3765 3080 2455 4239 3563 * 2540 2125 * * * * * 66 0 * * * * * * 2991 0 0 E 67 1772 3563 * 1786 * * * * * 5326 * * * * 2815 3521 3673 * * * 67 0 * * * * * * 2991 0 0 A 68 0 * * * * * * * * * * * * * * * * * * * 68 0 * * * * * * 2991 0 0 K 69 * * * * * * * 3810 662 * * * * * 1753 * * * * * 69 0 * * * * * * 2991 0 0 E 70 * * 1876 2782 * * * * 4239 * * * * 1820 4122 * 2406 * * * 70 0 * * * * * * 2991 0 0 M 71 * * * 3000 * * * * 2443 2542 4269 * * * 1362 * 3673 * * * 71 0 * * * * * * 2991 0 0 I 72 * * * * * * * 131 * * * * * * * * * 3521 * * 72 0 * * * * * * 2991 0 0 M 73 3563 * * * * * * * * 881 1425 * * * * * * * * * 73 0 * * * * * * 2991 0 0 S 74 2983 * * 4122 * * * * 4239 * * 3521 * * 3000 1045 3913 * * * 74 0 * * * * * * 2991 0 0 V 75 3673 * * * * * * 2738 * 4122 * * * * 3765 2683 3563 1320 * * 75 0 * * * * * * 2991 0 0 L 76 * 3000 * * * * * * * 193 * * * * * * * * * * 76 0 * * * * * * 2991 0 0 D 77 * * 1223 2443 * 3673 * * * * * 3810 * 3521 3563 * * * * 3913 77 0 * * * * * * 2991 0 0 T 78 * * * 3765 * * * 1999 * * * * 3810 * * 3866 898 * * * 78 0 * * * * * * 2991 0 0 K 79 * * * * * * * * 766 * * * * * 1280 * * * * * 79 0 * * * * * * 2991 0 0 S 80 2748 3193 * * * * * * * * * * * * * 892 * 2301 * * 80 0 * * 0 * * * 2345 0 0 //