HHsearch 1.5
NAME  c6gnyD_
FAM   
FILE  c6gnyD_
COM   /bmm/www/servers/phyre2/HH/hhmake -i c6gnyD_.a3m 
DATE  Sat Dec 22 08:49:47 2018
LENG  31 match states, 31 columns in multiple alignment
FILT  2 out of 6 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100)
NEFF  1.2 
EVD   0.4619  3.1718 
SEQ
>ss_dssp
CCCCGGGSCCCCSCCCCCCTTSTTCCCCCCC
>sa_dssp
EEEDEEEDEDEEDEEEEEEDEEEECEEEEEE
>ss_pred
CCCCHHHHHHHHHHHHHHCCCCCCHHHHEEC
>ss_conf
9768899999986677645664311101009
>Consensus
gyxsxxxmkkxxgelhdfipgtsgyxayxvq
>c6gnyD_
GYISIDAMKKFLGELHDFIPGTSGYLAYHVQ
>UniRef50_UPI000194CFC3(236-265:281) PREDICTED: similar to rCG26910 n=1 Tax=Taeniopygia guttata RepID=UPI000194CFC3  E=3e-10 s/c=2.21 id=71% cov=100%
-YPSAQDMKKYEGELHDFIPGTSGYAAYWVQ
#
NULL   3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	
HMM    A	C	D	E	F	G	H	I	K	L	M	N	P	Q	R	S	T	V	W	Y	
       M->M	M->I	M->D	I->M	I->I	D->M	D->D	Neff	Neff_I	Neff_D
       0	*	*	0	*	0	*	*	*	*	
G 1    *	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	1
       0	*	*	*	*	*	*	1000	0	0	

Y 2    *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	2
       0	*	*	*	*	*	*	1203	0	0	

I 3    *	*	*	*	*	*	*	1000	*	*	*	*	1000	*	*	*	*	*	*	*	3
       0	*	*	*	*	*	*	1203	0	0	

S 4    *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	4
       0	*	*	*	*	*	*	1203	0	0	

I 5    1000	*	*	*	*	*	*	1000	*	*	*	*	*	*	*	*	*	*	*	*	5
       0	*	*	*	*	*	*	1203	0	0	

D 6    *	*	1000	*	*	*	*	*	*	*	*	*	*	1000	*	*	*	*	*	*	6
       0	*	*	*	*	*	*	1203	0	0	

A 7    1000	*	1000	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	7
       0	*	*	*	*	*	*	1203	0	0	

M 8    *	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	8
       0	*	*	*	*	*	*	1203	0	0	

K 9    *	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	9
       0	*	*	*	*	*	*	1203	0	0	

K 10   *	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	10
       0	*	*	*	*	*	*	1203	0	0	

F 11   *	*	*	*	1000	*	*	*	*	*	*	*	*	*	*	*	*	*	*	1000	11
       0	*	*	*	*	*	*	1203	0	0	

L 12   *	*	*	1000	*	*	*	*	*	1000	*	*	*	*	*	*	*	*	*	*	12
       0	*	*	*	*	*	*	1203	0	0	

G 13   *	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	13
       0	*	*	*	*	*	*	1203	0	0	

E 14   *	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	14
       0	*	*	*	*	*	*	1203	0	0	

L 15   *	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	15
       0	*	*	*	*	*	*	1203	0	0	

H 16   *	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	16
       0	*	*	*	*	*	*	1203	0	0	

D 17   *	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	17
       0	*	*	*	*	*	*	1203	0	0	

F 18   *	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	18
       0	*	*	*	*	*	*	1203	0	0	

I 19   *	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	19
       0	*	*	*	*	*	*	1203	0	0	

P 20   *	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	20
       0	*	*	*	*	*	*	1203	0	0	

G 21   *	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	21
       0	*	*	*	*	*	*	1203	0	0	

T 22   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	22
       0	*	*	*	*	*	*	1203	0	0	

S 23   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	23
       0	*	*	*	*	*	*	1203	0	0	

G 24   *	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	24
       0	*	*	*	*	*	*	1203	0	0	

Y 25   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	25
       0	*	*	*	*	*	*	1203	0	0	

L 26   1000	*	*	*	*	*	*	*	*	1000	*	*	*	*	*	*	*	*	*	*	26
       0	*	*	*	*	*	*	1203	0	0	

A 27   0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	27
       0	*	*	*	*	*	*	1203	0	0	

Y 28   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	28
       0	*	*	*	*	*	*	1203	0	0	

H 29   *	*	*	*	*	*	1000	*	*	*	*	*	*	*	*	*	*	*	1000	*	29
       0	*	*	*	*	*	*	1203	0	0	

V 30   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	30
       0	*	*	*	*	*	*	1203	0	0	

Q 31   *	*	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	31
       0	*	*	0	*	*	*	1203	0	0	

//