HHsearch 1.5 NAME c6ghrF_ FAM FILE c6ghrF_ COM /bmm/www/servers/phyre2/HH/hhmake -i c6ghrF_.a3m DATE Sat May 11 08:13:34 2019 LENG 69 match states, 69 columns in multiple alignment FILT 38 out of 42 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.3 EVD 0.4423 0.7307 SEQ >ss_dssp CTTHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHCTTSTTTCCCCC >sa_dssp EEECEEDBDDCDDDADEDDEEEDDEBDEDADECCEDCEEDCDDECEECDEEDDDCEEDEECEECEEEEE >ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCC >ss_conf 950999999999999995029999999999999899998786400334627999873898667421159 >Consensus xxxlxxxixxaixxAxexcsxeCxxAWDeVEELxAxashxrxxxxxxxdplExyCxdnPeadECRxYdd >c6ghrF_ MSNLEKQIEQAREEAHKICDGQCAAAWDALEELQAEAAHQRAEQQDHKTSFQQYCDDNPDAAECRIYDD >UniRef50_B0C4A4(18-86:87) Conserved domain protein n=6 Tax=Cyanobacteria RepID=B0C4A4_ACAM1 E=4e-09 s/c=0.91 id=47% cov=93% ---METRMEDALSQARETCASEgatskaCAVAWDIVEELQAEYSHKKVQEQ--PSQFEDFCDDNPNAEECRVYD- >UniRef50_Q2PC90(64-129:129) Small chloroplast protein n=1 Tax=Galdieria sulphuraria RepID=Q2PC90_GALSU E=3e-07 s/c=0.86 id=45% cov=94% ---IQESIKKAEEATKKFGrdSKEAAAAWDAVEELDAEASHQRVRQKTD--PLETFCDESPEAEECRVYDN >UniRef50_A6Q0K5(7-80:80) Calvin cycle protein CP12 n=3 Tax=Chlamydomonadales RepID=CP12_CHLRE E=1e-05 s/c=0.69 id=41% cov=99% --DLNKKVQDAVKEAEDACakgtSADCAVAWDTVEELSAAVSHKKdAVKADVTLTdpLEAFCKDAPDADECRVYED >UniRef50_B6SXI1(70-144:144) CP12-1 n=3 Tax=Andropogoneae RepID=B6SXI1_MAIZE E=7e-15 s/c=1.09 id=41% cov=99% --EISDKVSESIKQAEETCaddqkgDAECAAAWDEVEELSATASHARDslKETNANDPLEKYCKDNPDSEECRIYDN >UniRef50_Q9C9K2(63-134:134) Putative uncharacterized protein F14G6.16 n=2 Tax=Arabidopsis thaliana RepID=Q9C9K2_ARATH E=4e-13 s/c=1.05 id=34% cov=97% ---LSEMIEEKVKEATEVCeaeemSEECRVAWDEVEEVSQARADLRIKlKLLNQDPLESFCQENPETDECRIYED >UniRef50_A8ZNU5(133-203:208) CBS domain containing membrane protein n=17 Tax=Cyanobacteria RepID=A8ZNU5_ACAM1 E=6e-12 s/c=1.01 id=42% cov=96% --ELAQKTQQLIADAHAICkqkgtnSKACRQAWQDVDAVQAEAAHQRAEKLE-KTAFEAFCEEYPEAFKDREYD- >UniRef50_Q8KX25(135-204:208) CBS domain-containing protein; possibly associated with hydrogenase assembly n=3 Tax=Chroococcales RepID=Q8KX25_SYNP2 E=5e-10 s/c=0.93 id=33% cov=93% -----AEMQAAIQKTKLICqekghdSSDCIQAWAMVEELQAKTAYQQSTKVD-KTALEEYLEKNPEAIDHLMVDN >UniRef50_Q20FC7(63-131:131) CP12 n=1 Tax=Mesostigma viride RepID=Q20FC7_MESVI E=1e-08 s/c=0.88 id=37% cov=99% --DVAKSIKDAEETCASGTTGECAAAWDEVEELsaAASDKKKKEKEIAKKDPLEKFCEDNPETDECRVYED >UniRef50_B7KG86(134-196:208) CBS domain containing protein n=6 Tax=Cyanobacteria RepID=B7KG86_CYAP7 E=1e-09 s/c=1.02 id=36% cov=84% ---LQREVTRTIEEARSLaasygpTSKECLEAWAIADELQAEAIYQEGVNPPEKTAFQLFCDEYPE--------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * * 0 * * * * * * * * * 1 0 * * * * * * 1000 0 0 S 2 * * * * * * * * * * * * * * * 1618 569 * * * 2 0 * * * * * * 1680 0 0 N 3 * * 1541 1838 * * * * * * * 2017 * * * 2948 * * * * 3 0 * * * * * * 2887 0 0 L 4 * * * * * * * 2094 * 737 4156 * * * * * 4621 3854 * * 4 0 * * * * * * 3259 0 0 E 5 2485 * 4621 2996 * * * * * * * 4264 * 1725 * 1844 * * * 5477 5 0 * * * * * * 3259 0 0 K 6 3187 * 2304 1629 * * * * 2387 * * * * 3432 4362 * 4965 * * * 6 0 * * * * * * 3387 0 0 Q 7 4195 * * 3145 * * * * 1545 3571 3797 * * 4086 2998 2897 * 6025 * * 7 0 * * * * * * 3387 0 0 I 8 * * * * * * * 838 * * 3267 * * * * * 4411 1788 * * 8 0 * * * * * * 3435 0 0 E 9 3046 * 4456 1613 * * * * 3502 4919 * * * 2307 * 3795 3510 5436 * * 9 0 * * * * * * 3435 0 0 Q 10 2801 * 3135 1542 * * * * 3053 * * * * 2940 3578 5035 4866 * * * 10 0 * * * * * * 3435 0 0 A 11 1203 * * 4060 * * * * 2585 3342 * * * * * 2354 4477 * * * 11 0 * * * * * * 3435 0 0 R 12 * * * 3911 * * * 1121 5028 5076 * * * 5521 2987 4276 * 2226 * * 12 0 * * * * * * 3435 0 0 E 13 2674 * 6018 1721 * 5436 * * 1926 * * * * 3301 * 3475 * 4416 * * 13 0 * * * * * * 3435 0 0 E 14 3097 * 3620 1315 * * * * 3448 * * 5371 * 2794 * 4089 4017 5692 * * 14 78 4253 * 0 * * * 3435 1253 0 A 15 193 4644 * * * * * * * * * * * * * * 3551 * * * 15 0 * * * * * * 3435 0 0 H 16 4644 * * 2008 * 5521 3169 * 2620 * * * * 3126 2216 * 3541 * * * 16 0 * * * * * * 3435 0 0 K 17 3613 * 3371 1140 * * * * 3678 3179 * * * 4543 5759 3558 4919 * * * 17 28 5692 * 1000 1000 * * 3435 1000 0 I 18 2480 * * * 5237 4644 * 2780 * 3463 * * 5521 * * 6054 2316 1835 * * 18 93 4005 * 2585 263 * * 3435 1410 0 C 19 5028 412 * * * 5237 * * * * * * * * * 5042 2847 5521 * * 19 1069 934 * 2376 309 * * 3435 3079 0 D 20 3122 * 2599 4416 * * * * 5408 * * * * 5436 * 769 4644 * * * 20 63 4558 * 2100 383 * * 3435 1338 0 G 21 3528 * * 4574 * 1175 * 4552 2535 * * * 4543 * * 3499 3609 * * * 21 253 2636 * 2127 375 * * 3435 2075 0 Q 22 3342 * 3279 714 * * * * * * * 4919 * 3403 * 4033 * * * * 22 102 3868 * 2585 263 * * 3435 1496 0 C 23 3172 241 * * * 4552 * * * * * * * * * * * * * * 23 0 * * * * * * 3435 0 0 A 24 1115 * * * * 4552 * 3393 3936 4477 * * * * 2237 * * 3676 * * 24 0 * * * * * * 3435 0 0 A 25 1459 * * 3732 * * * * * * * 4552 * 2667 * * * 1471 * * 25 0 * * * * * * 3435 0 0 A 26 63 * * * * * * * * * * * * * * 4552 * * * * 26 63 4552 * 2585 263 * * 3435 1000 0 W 27 * * * * * * * * * * * * * * * * * * 0 * 27 0 * * * * * * 3435 0 0 D 28 2686 * 326 * * * * * * * * * * 4411 * * * * * * 28 0 * * * * * * 3435 0 0 A 29 2999 * 4411 1046 * * * 2565 * * 4087 * * * 4276 * 4500 5650 * * 29 0 * * * * * * 3435 0 0 L 30 4477 * * * * * * * * 3962 * * * * * * 5408 205 * * 30 0 * * * * * * 3435 0 0 E 31 * * 2801 224 * * * * * * * * * * * * * * * * 31 50 * 4866 * * * * 3435 0 0 E 32 3308 * * 154 * * * * * * * * * * * * * * * * 32 0 * * * * * 0 3416 0 1000 L 33 5603 * * * * * * * * 334 * * * * * * * 2425 * * 33 102 3872 * 687 1400 * 0 3416 1397 1000 Q 34 4556 * 4476 4135 4999 * * * * * * * * 1225 * 1335 * * * * 34 0 * * * * * 0 3416 0 1000 A 35 171 * * * * * * * * * * * * 3163 * * * * * * 35 0 * * * * 0 * 3416 0 1000 E 36 1144 * * 1327 * * * * 3577 * * * * * * 4644 5313 * * * 36 0 * * * * * * 3435 0 0 A 37 927 * 4097 * * * * * 3097 3501 * * * * 5411 5035 4087 4500 * 4232 37 36 5324 * 0 * * * 3435 1000 0 A 38 1370 * * * 5324 * * 4477 4644 * * * * * * 990 * * * * 38 0 * * * * * * 3435 0 0 H 39 * * 3213 * * * 537 * 3751 * * * * * 5324 * * * * 3269 39 57 4686 * 0 * * * 3435 1000 0 Q 40 2272 * * 4866 5513 * 4543 * 2127 4424 * * * 1496 3970 * * * * * 40 107 * 3813 * * * * 3435 0 0 R 41 * * 5692 4344 * * 4225 * 1781 * * * * 2870 1151 * * * * * 41 301 5265 2625 0 * 0 * 3374 1000 1576 A 42 2372 * 2294 4514 * 3569 * 5002 * 4946 * 5416 4334 4281 4454 3007 * 3482 * 5197 42 114 5138 4394 1000 1000 1251 786 3326 1000 2193 E 43 5409 * 4215 2679 * * * 4550 1735 * * * * 3777 3018 * 3978 2612 * * 43 40 5193 * 0 * 1153 862 3354 1000 1951 Q 44 3208 * * 3031 * * * * 1504 4892 * 4308 * 2753 4362 3659 4838 5540 * * 44 0 * * * * 673 1423 3412 0 1470 Q 45 5322 * * 3681 * * * 4612 1897 2760 5120 * 4389 2094 * * 3838 4072 * * 45 263 4699 2967 0 * * 0 3405 1164 1000 D 46 3288 * 1700 2159 * 4478 * * 3786 3603 * 5071 3317 * * * 4791 * * * 46 317 * 2343 * * 1456 654 3352 0 2202 H 47 3564 * 3853 3367 * 4277 3092 * 2059 * * 4983 4192 4731 3271 5259 4227 4903 * * 47 157 3980 4643 986 1014 305 2390 3231 1399 2637 K 48 3867 * 3860 4388 * * * * 1561 * * 5203 4956 4127 4902 2586 3247 4211 * * 48 0 * * * * 1690 535 3389 0 1770 T 49 4231 * 908 * * * * * 4495 5328 * 3984 * * * 3948 2206 * * * 49 0 * * * * 0 * 3409 0 1509 S 50 2348 * * * * * * * * * * 5030 863 5090 * 2561 5364 * * * 50 115 5364 4252 1000 1000 * * 3426 1000 0 F 51 * * * * 2321 * * 4828 * 473 * * * * * * * * * 4494 51 0 * * * * 0 * 3365 0 1000 Q 52 * * 4852 431 * * * * * * * * * 2473 4526 * * * * * 52 0 * * * * * * 3426 0 0 Q 53 2393 * 4833 2770 * * * * 3303 3346 * 3979 4675 3842 * 4099 2739 * * 4387 53 0 * * * * * * 3426 0 0 Y 54 * * * * 1163 * * * * 5137 * * * * * * * * * 929 54 0 * * * * * * 3426 0 0 C 55 * 172 * * * * * * * 4065 * * * * * * * * * 4252 55 0 * * * * * * 3426 0 0 D 56 5378 * 1838 2315 * * * * 1651 * * 4852 * 3279 * 4675 * * * * 56 0 * * * * * * 3426 0 0 D 57 4503 * 845 1907 * * 4675 * 4065 4890 * * * * * * * * * * 57 0 * * * * * * 3426 0 0 N 58 4483 * * * 4526 * 4890 * * * * 539 * * * 4501 * * * 2778 58 0 * * * * * * 3426 0 0 P 59 * * * * * * * * * * 5137 * 42 * * * * * * * 59 0 * * * * * * 3426 0 0 D 60 * * 2359 529 * * * * * 4675 * 3781 * * * * * * * * 60 0 * * * * * * 3426 0 0 A 61 806 * * * * * * * * * * * * * * 5270 1314 * * * 61 0 * * * * * * 3356 0 0 A 62 4592 * 930 2919 3207 * * 3514 4907 4849 * 4728 * * * * * * * * 62 0 * * * * * * 3356 0 0 E 63 * * 3250 346 * * * * 4304 * * * * * * * * 4117 * * 63 0 * * * * * * 3356 0 0 C 64 * 274 3207 * * * 3955 * * * * * * * * * * * * * 64 0 * * * * * * 3356 0 0 R 65 4622 * * * * * * * 5118 3334 * * * * 266 * * * * * 65 60 4622 * 0 * * * 3356 1000 0 I 66 * * * 3207 * * * 2589 * 3547 3180 * * * * * 2415 1547 * * 66 0 * * * * * * 3356 0 0 Y 67 * * * * 5441 * * * * * * * * * * * * 3955 * 132 67 0 * * * * * * 3356 0 0 D 68 * * 759 1420 * * * * * * * 4814 * * * * * * * * 68 0 * * * * * * 3356 0 0 D 69 * * 666 4917 * * * * * * * 1570 * * * * * * * * 69 0 * * 0 * * * 2923 0 0 //