HHsearch 1.5 NAME c6gcsf_ FAM FILE c6gcsf_ COM /bmm/www/servers/phyre2/HH/hhmake -i c6gcsf_.a3m DATE Sat Oct 13 08:31:04 2018 LENG 80 match states, 80 columns in multiple alignment FILT 90 out of 94 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 6.3 EVD 0.4026 0.0456 SEQ >ss_dssp CEEEEECCCSSTTTHHHHHHHTTSHHHHHTTCSSSEEECCCCSSCCCEEEEEETTTEEEEEECCCCSSSSHHHHHHHHHC >sa_dssp EDBDACBBEEDEDACBACDBCEEDCEDCDEEDEEBEBDDEDDEEDEBCBBBCCEEEEECEDDBEEBEDEDADEDBEDBDE >ss_pred CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHC >ss_conf 94999974998321689999972238899958995799997289986899999179799998689998899999998719 >Consensus kxlxxxxcxxxxsSxGvRxFixxxlxxxxxxNPxvxixvxxxxxxxPxixaxYxnGxekxixlxnxxxxeIxxxlxxLxx >c6gcsf_ REIRFHLCQNGSSSAPLRQFVKNQIGAFQKANPSTKVLVREANGVKPIVFARFDHGHESKIGLDVSSEKEVAERVKSLIE >UniRef50_A0D0P0(12-90:100) Chromosome undetermined scaffold_33, whole genome shotgun sequence n=4 Tax=Paramecium tetraurelia RepID=A0D0P0_PARTE E=6e-20 s/c=1.25 id=26% cov=100% KELRFVFCQSCGRSEGVRNLVTKNYWQWKETNPKFPFVVRECESIDPYILVRYKYGVEKKALIGNLNEAELEQVLGQLV- >UniRef50_Q8N983(27-106:215) 39S ribosomal protein L43, mitochondrial n=40 Tax=Euteleostomi RepID=RM43_HUMAN E=8e-16 s/c=1.06 id=23% cov=101% QRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYLNGAVREESIHCKSVEEISTLVQKLAD >UniRef50_P82663(28-106:173) 28S ribosomal protein S25, mitochondrial n=4 Tax=Coelomata RepID=RT25_HUMAN E=2e-13 s/c=0.97 id=19% cov=100% KVMTVNYNTHGELGEGARKFVFFNIPQIQYKNPWVQIMMFKNMTPSPFLRFYLDSGEQVLVDVETKSNKEIMEHIRKIL- >UniRef50_Q8IJU5(10-85:213) Mitochondrial ribosomal protein L22/L43, putative n=6 Tax=Plasmodium RepID=Q8IJU5_PLAF7 E=1e-10 s/c=0.89 id=16% cov=96% KNILLRYSETGHSSRNVRFFLRYLLPEYKEENKHLNFEIHHEQYEEPKVIFEYINNTKYEISLKDIKSKHIVDIIN---- >UniRef50_Q4Q6A7(10-87:262) Putative uncharacterized protein n=7 Tax=Trypanosomatidae RepID=Q4Q6A7_LEIMA E=2e-10 s/c=0.86 id=19% cov=79% -----------------RQFMATHLPEFHRQYPQVKIDIRPRQWPESSITGIYRDGSEKAYSIRFLSSMGINVRFHRLV- >UniRef50_Q54RB6(10-87:124) Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q54RB6_DICDI E=6e-15 s/c=1.05 id=19% cov=99% KKLAINYCEFSGSSKYVRNILNSKVEKFKSVNPQIEFEYKVNRGSHPYLIATYESGVTKTVPLRGRTEEKVLKHIQNL-- >UniRef50_A4RRD0(7-88:113) Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RRD0_OSTLU E=3e-07 s/c=0.68 id=24% cov=99% KRVRVQFNPLDPRSTAAREFLARVTTAKaAKSNPECAVEPRVRNDAAPPVVAvEFASGARDQFNVHRMTVDDIARRIKTV-- >UniRef50_Q5KB51(28-107:150) Putative uncharacterized protein n=1 Tax=Filobasidiella neoformans RepID=Q5KB51_CRYNE E=4e-13 s/c=0.94 id=20% cov=100% RKLIFDYDAESPSQHGIRSYIRKPLLDMARENPDVEIVVRRlKRGKAAVLRGHYVNGRDKVICVNKLEANEVANKVGLLL- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * R 1 * * * * * * * * 1146 * * * * 1879 1856 * * * * * 1 0 * * * * * * 5706 0 0 E 2 4541 * * 1444 * * * * 2533 5476 * 5116 * 4718 1800 * * 4636 * * 2 0 * * * * * * 5706 0 0 I 3 * * * * * * * 1745 * 1017 4706 * * * * * * 2563 * * 3 0 * * * * * * 6104 0 0 R 4 5977 6198 4992 5140 * * * 5097 * 5550 * 6052 * 4734 1298 4503 1802 3840 * * 4 0 * * * * * * 6104 0 0 F 5 5856 * * * 1569 * * 1917 * 1989 * * * * * * * 2953 * * 5 0 * * * * * * 6187 0 0 H 6 * * 5948 5747 4677 * 2307 4980 3493 3826 * 3248 * 3126 3261 3335 6571 3810 * 5165 6 0 * * * * * * 6187 0 0 L 7 5057 5211 * * 1819 * * * 5672 2512 * * * * * * * 4664 * 1234 7 0 * * * * * * 6208 0 0 C 8 4475 550 4774 * * * * * * * * 3568 * * * 2725 * * * * 8 0 * * * * * * 6208 0 0 Q 9 4311 * 2450 3656 * 5367 6693 * 2916 * * 3332 3556 2114 4570 * 3976 * * * 9 0 * * * * * * 6208 0 0 N 10 5698 * 4407 5232 4514 5882 3777 5315 3017 5899 * 4367 * 6410 6682 3939 2047 3850 3009 4747 10 0 * * * * * * 6238 0 0 G 11 3553 5350 4400 4764 * 1314 5216 * * * * 4198 5782 * 6047 2029 4956 * 6387 * 11 0 * * * * * * 6256 0 0 S 12 4530 * 5283 3073 * 1384 5081 * 3692 * * 4867 2729 4214 6063 5147 5341 6036 * * 12 0 * * * * * * 6390 0 0 S 13 3072 6327 6063 6958 * 4547 4316 5518 * 5935 * * * 4353 4191 887 3832 * * * 13 0 * * * * * * 6390 0 0 S 14 * * * * * 4993 4573 * * * * 5523 * 6129 * 167 * * * * 14 25 * 5873 * * * * 6368 0 0 A 15 2550 * 5582 3449 * * 4430 5508 2437 4693 * * * 4243 1842 4336 4955 6427 * * 15 0 * * * * 0 * 6339 0 1000 P 16 3691 * * * * 388 5171 * 5584 * * 5232 4492 * * * 6454 * * 5189 16 0 * * * * * * 6368 0 0 L 17 2748 6685 * * * * * 2828 * 2478 2878 * * * * * 4119 1610 * * 17 0 * * * * * * 6368 0 0 R 18 * * 6653 * * * * * 3763 * 5972 6031 * * 190 * * 6861 * * 18 0 * * * * * * 6400 0 0 Q 19 4404 * 2593 2039 4922 * 6396 * 4554 4894 * 2625 * 3605 5658 3989 3924 * * 5077 19 13 6848 * 4248 78 * * 6509 1000 0 F 20 * * * * 454 * * 6244 * 4537 * * * * * * * 5894 * 2346 20 0 * * * * * * 6509 0 0 V 21 * * * * 5069 * * 1768 * 1476 4575 * * * * * * 1943 * 6039 21 41 5174 * 0 * * * 6509 1748 0 K 22 4073 * 3773 2249 4535 6222 * * 3193 3544 6721 4624 5566 4128 3830 4281 3655 5060 * 4441 22 0 * * * * * * 6509 0 0 N 23 5405 * 6468 3798 4998 * 4375 * 2773 5894 * 2572 * 6114 3045 2594 3569 * 4239 4506 23 76 4284 * 295 2433 * * 6509 2304 0 Q 24 4868 6206 3304 4325 5876 3858 2865 * 3320 3885 6975 2198 6385 5224 4915 4368 6848 5089 * 5279 24 65 4513 * 638 1484 * * 6509 2289 0 I 25 4493 * * * 4854 4940 * 3676 * 1186 * * 6265 * 6672 * 5986 3844 6087 2013 25 0 * * * * * * 6509 0 0 G 26 3996 * 4670 4000 * 6018 5792 4837 4218 3627 * 6044 1784 5051 * 3734 5430 2917 3923 * 26 0 * * * * * * 6509 0 0 A 27 3484 * 2353 3349 * 5357 4783 6195 3931 6265 * 3488 4929 2636 4862 3177 4794 * * * 27 14 6672 * 0 * * * 6509 1000 0 F 28 * * * 4940 1691 * * 3014 4562 1881 3761 * 5566 * * * * 5459 4181 4403 28 23 5986 * 0 * * * 6509 1000 0 Q 29 1549 * * * 4940 5513 5777 * 1618 5566 6440 * * 2664 5291 * 6265 5025 * * 29 12 6897 * 0 * * * 6509 1000 0 K 30 3486 * * 3448 4666 * 5894 6039 1971 5566 6413 5678 * 3380 2581 4385 6222 5729 * 3367 30 0 * * * * * * 6509 0 0 A 31 2485 * 4394 2869 * * 5374 * 2346 3875 * 4181 * 3496 3603 3706 5471 6244 6718 * 31 44 5063 * 2103 382 * * 6509 1806 0 N 32 6199 * * * 6580 * 4526 * 6044 * * 391 * 5566 5946 4048 * * 6264 4512 32 0 * * * * * * 6509 0 0 P 33 5946 * * * * * * * 6065 * * 6439 200 6358 5376 6264 5933 * * 5547 33 24 5946 * 2322 322 * * 6509 1000 0 S 34 4405 6413 3026 3949 * 3907 2794 * 3101 6195 * 3910 * 2399 * 3579 4907 * 4668 * 34 20 6206 * 0 * * * 6509 1000 0 T 35 5933 5315 6195 * 4136 * * 2451 * 2623 * * * * 5935 * 2775 1395 * * 35 0 * * * * * * 6509 0 0 K 36 3910 * 6264 2530 6044 5190 * * 4014 * * 4794 2227 2189 * 5965 5933 2821 * * 36 0 * * * * * * 6509 0 0 V 37 5946 6039 * * 1949 * 6195 1700 * 3054 5616 * * * * * 5933 2114 * * 37 0 * * * * * * 6509 0 0 L 38 * * 5777 2994 * * 4122 4088 6199 2037 3965 6672 * 4894 4683 * 4383 3099 * 2542 38 20 6180 * 0 * * * 6509 1000 0 V 39 4811 5076 * * 5225 * * 1777 4713 4777 5977 6175 5941 6371 5550 * 3049 1662 * 5311 39 0 * * * * * * 6436 0 0 R 40 5606 * * 3810 3901 * 4988 5224 3392 5510 6597 5192 * 3709 1428 4623 3960 4185 * 5623 40 23 * 5980 * * * * 6432 0 0 E 41 5883 * 6797 1880 * * 4488 5613 3010 4310 4980 6345 2292 4553 3964 5413 5112 4168 * * 41 34 5419 * 0 * * 0 6418 1633 1000 A 42 3622 3207 4182 5148 6198 6649 7038 6343 3318 6063 * 2875 * 5508 1733 4228 6074 4607 * * 42 11 7038 * 1000 1000 0 * 6418 1000 1000 N 43 5592 * 6174 3485 * 5046 6659 6462 3969 5061 5157 3718 3336 3664 1807 2927 6564 * * 5570 43 0 * * * * * * 6432 0 0 G 44 4160 4755 4215 4956 5569 1249 3971 * 6882 * * 3593 * 5388 6621 4874 3861 5888 5809 4257 44 68 * 4434 * * * * 6432 0 0 V 45 3868 5346 4924 3957 * 4926 5300 3227 2938 6257 6305 6310 3029 6216 2820 4824 4243 3185 * * 45 0 * * * * 0 * 6417 0 2059 K 46 4166 * 3667 3083 5256 * 1816 4530 5557 5498 5357 6449 4054 4119 * 3219 4588 4377 * * 46 0 * * * * * * 6432 0 0 P 47 4485 * * * * 4538 * * * * * * 162 * * 5774 * * * * 47 0 * * * * * * 6431 0 0 I 48 5944 * * 5528 2851 6366 4148 4528 2616 4411 * 4860 5942 5199 3143 3866 4944 3084 * 3451 48 0 * * * * * * 6431 0 0 V 49 4505 * * * 5222 * * 1906 * 1521 4500 * * * * * * 1891 * * 49 0 * * * * * * 6431 0 0 F 50 * * 6487 6196 4166 * * 3632 4143 4661 6110 5628 * 5252 2411 5312 2542 2542 4421 3670 50 0 * * * * * * 6431 0 0 A 51 938 6329 * * 3215 2394 * 4402 * 5532 * * * * * * 5278 3777 * * 51 24 5942 * 0 * * * 6431 1000 0 R 52 * * 6149 1806 4080 * 3740 4020 5220 * * 5981 * 5570 2009 4825 4128 6362 * 3514 52 0 * * * * * * 6431 0 0 F 53 * * * * 2379 * 5532 * * 3945 * * * 6366 6110 * * * * 526 53 19 * 6230 * * * * 6431 0 0 D 54 3347 * 3052 2799 * 4030 6096 3809 4783 2437 5975 3854 * 6608 3862 * 5618 3557 * * 54 19 6229 * 0 * * 0 6414 1000 1000 H 55 * 5370 2921 6573 4292 5803 5688 * * * 4670 1069 * * 4375 4130 4719 * 4723 4381 55 0 * * * * * 0 6422 0 1000 G 56 6229 * * 5781 * 152 6147 * * * * 4194 * * * * * * * * 56 0 * * * * * 0 6385 0 1000 H 57 3260 * 6048 2816 5246 5692 4501 6717 3380 * * 4365 * 4752 2017 4942 4972 3000 * 5577 57 0 * * * * * 0 6385 0 1000 E 58 * * 4248 1258 * * 7212 4264 3305 * * 6048 * 4339 3349 5498 3185 4069 6072 * 58 0 * * * * * 0 6385 0 1000 S 59 * * 3713 4053 5970 * 4260 5462 1284 6438 6309 6686 * 5030 3099 5108 5363 3700 5518 5124 59 0 * * * * * 0 6385 0 1000 K 60 3399 5176 4934 3676 * * 5709 5287 3186 4029 4755 5440 6337 3028 6287 3552 3690 3172 5113 4637 60 0 * * * * * 0 6385 0 1000 I 61 4226 * * 4399 4001 * 6576 1414 5376 5669 5387 * * 5643 5781 6149 5124 1818 * 5743 61 0 * * * * * 0 6385 0 1000 G 62 5989 2513 2539 5288 5616 4501 * * 6585 5585 * 3633 3209 5771 5405 2023 5830 5546 * * 62 26 5781 * 1585 585 * 0 6385 1000 1000 L 63 4088 4296 * * * * * 3025 * 1308 * * * * * * 4888 1601 * * 63 0 * * * * * 0 6385 0 1000 D 64 3275 * 3175 2960 * 6272 4351 * 1813 * * 4448 5049 6468 2665 5728 4408 * * * 64 0 * * * * 0 * 6385 0 1000 V 65 * 6646 3305 * 5748 2347 * * 3838 * * 1147 * * 5110 3707 5317 6445 * 6638 65 0 * * * * * * 6403 0 0 S 66 6487 * * * 4193 * 5300 4696 2623 1425 2982 5126 * 4910 4644 5786 4904 4841 * 5608 66 0 * * * * * * 6403 0 0 S 67 4799 * 2819 3069 * * 6427 * 3780 * * 3445 6019 6665 * 1742 2303 * * * 67 0 * * * * * * 6403 0 0 E 68 2327 6078 4772 2594 * * * 4538 6876 * 5553 5965 3551 3566 3125 3402 5304 3467 * * 68 19 6241 * 0 * * * 6403 1000 0 K 69 3786 * 2722 2341 * 4717 * 5999 3256 * 5748 3424 4260 4241 5300 3475 4670 5063 * 5732 69 30 5601 * 0 * * * 6403 1000 0 E 70 3810 * 2450 1282 5289 4290 5135 * 4861 * * 4813 * 2882 6369 6409 * * * * 70 0 * * * * * * 6403 0 0 V 71 * * * * * * * 573 * 4536 * * * * * * * 1812 * * 71 0 * * * * * * 6407 0 0 A 72 3673 * 6102 2098 * 5716 4975 3697 4595 2334 3611 4573 * 4578 * 3864 6757 4440 5958 * 72 0 * * * * * * 6410 0 0 E 73 5724 * 2578 3210 6238 5213 * * 2092 6117 5512 3590 * 3314 4710 3770 3641 5705 * * 73 0 * * * * * * 6418 0 0 R 74 4138 6541 * 5267 * * 3070 3334 2815 3454 * 6614 * 3126 3223 * 3768 3937 3569 * 74 15 * 6563 * * * * 6399 0 0 V 75 5245 * * * 3878 * * 2127 * 1256 4722 * * * * * 5473 2339 * * 75 13 * 6815 * * 0 * 6408 0 1000 K 76 4306 * 4894 2360 * 4555 4761 5225 2655 * * 3433 * 3816 3162 4020 3280 5952 * * 76 0 * * * * 0 * 6457 0 1000 S 77 * * 4418 3655 5705 5707 5103 * 3106 2817 5923 3780 * 3581 2985 3042 4100 * 4652 5074 77 0 * * * * * * 6143 0 0 L 78 * * * * * * * 3759 * 318 * * * * * * * 3015 * * 78 0 * * * * * * 5995 0 0 I 79 3253 * * * * * * 3460 * 1467 * * * * * * * 1176 * * 79 0 * * * * * * 5111 0 0 E 80 * * 2012 2984 * * * * 676 * * * * * * * * * * * 80 0 * * 0 * * * 4157 0 0 //