HHsearch 1.5 NAME c6g6iB_ FAM FILE c6g6iB_ COM /bmm/www/servers/phyre2/HH/hhmake -i c6g6iB_.a3m DATE Sat Nov 3 08:20:35 2018 LENG 104 match states, 104 columns in multiple alignment FILT 108 out of 208 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.3 EVD 0.4435 0.0913 SEQ >ss_dssp CHHHHHHHHHHHHHHTSTTCCCEEEEEEEEETTEEEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHSSCEEEEEEEEEECCTTCCCCCBCCCSCCCTTCC CEEC >sa_dssp EDBDDBCDDABEBADEBEDBCCACBACCEDDEECBCADABAABCDECDEEDACEBBEDADECADEEBEECDDBCABACEBEEEDEEECCDCEEECDEECE DDDE >ss_pred CCHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHH HCCC >ss_conf 9868999999999953866113226889942884999999998889999999999999999999606740289961154667875465202475522462 1049 >Consensus xxxExvxxxIxxiaxxvpgVxxvhxlrxRxxGxxxxvdlhIxVdxxmsVxeaHxIaxxVexxIxxxxxxvxxVhVhxexxexxxxxkpxxxxxpxxxxxx xxxx >c6g6iB_ SHMEAVQNRIVEAAERVPGVRGVIHLRARYVGQDIAADMIIGVDPENTVEQAHEICEAVQAAVCGKIRRIESLHVSAEAREIGDTTKPSFSDQPLSFDEV MLSK >UniRef50_Q0TS00(212-287:289) Cation efflux family protein n=17 Tax=Clostridium RepID=Q0TS00_CLOP1 E=2e-12 s/c=0.97 id=24% cov=73% ---EEKEKEIKTIVDEVEGIKSLREIRTRKYGAMAYVDLVICVDKDISVFEGHRIASDLENLILKKMKFIKGVTVHVE---------------------- ---- >UniRef50_Q2W8P3(222-312:333) Predicted Co/Zn/Cd cation transporters n=2 Tax=Magnetospirillum RepID=Q2W8P3_MAGSA E=3e-12 s/c=0.80 id=23% cov=78% -----------------PGV-SVVDLRGRRMGETWEVDLQLSISSQVTVEECHALTRELESRIAREEPHACHIRIRFIPQ-SGDATKTAVIETAAAVDE- ---- >UniRef50_Q8KB34(212-287:388) Cation efflux family protein n=1 Tax=Chlorobaculum tepidum RepID=Q8KB34_CHLTE E=6e-05 s/c=0.64 id=26% cov=22% -----------------PDITNIKRLNVRKSGSVYFADI------------------------------------------------------------- ---- >UniRef50_B0NXK4(230-324:391) Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0NXK4_9CLOT E=5e-08 s/c=0.62 id=14% cov=40% --------------------------------------------------EVHDLMDHIEMRLMEEYHCEATIHMDPvvtDDEEVNETRKEVFN------ ------- >UniRef50_B3JHL5(225-297:333) Putative uncharacterized protein n=2 Tax=Bacteroides RepID=B3JHL5_9BACE E=9e-07 s/c=0.75 id=23% cov=55% -------------------------------GNSLYMDCDLTIPWYYNIEQGHKIGARLQEAMKAKYADHAVLNIHLDPCNIFETPK------------- ---- >UniRef50_Q20864(356-432:446) Putative uncharacterized protein n=2 Tax=Caenorhabditis RepID=Q20864_CAEEL E=3e-06 s/c=0.69 id=17% cov=62% AHPELINRIVHQCIEHDPRITHIDTVYVYHYGTKFLVEVHIVLDQNMSLKVTHDIAESLQTGI------------------------------------- ---- >UniRef50_A0RND9(205-290:291) Ferrous-iron efflux pump FieF n=1 Tax=Campylobacter fetus subsp. fetus 82-40 RepID=A0RND9_CAMFF E=2e-09 s/c=0.74 id=18% cov=73% ---ESMVSGIIDIINLKHEVKSYHYLKSRISGEKYYFSVHLVFDPSISLSKAHSVADDIESEIRSKFNRhkwVFDMHFDTE------------------- ------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * S 1 1529 * * * * * * * * * * * * * * 614 * * * * 1 0 * * * * * * 2354 0 0 H 2 * * * * * * 952 * * * * * 2091 * 2010 * * * * * 2 0 * * * * * * 2871 0 0 M 3 * * * * 2010 * * * * * 2112 * 1807 * * 2091 * * * * 3 0 * * * * * * 2871 0 0 E 4 * * 2777 521 * * * * 4355 * * * * 3203 * * * * * * 4 0 * * * * * * 5161 0 0 A 5 1898 * 4123 1914 * 4148 * * * 3835 * * * 3377 * 2843 4416 * * * 5 0 * * * * * * 5188 0 0 V 6 * * 3961 4150 4756 * * 2600 5124 3126 4753 * 5061 4532 * * 4139 1593 * 4803 6 0 * * * * * * 5842 0 0 Q 7 4528 * * 1431 * * * 5106 4857 * 3827 4553 * 3746 2948 * 3882 3242 * 4984 7 0 * * * * * * 5970 0 0 N 8 5502 * 2915 2089 * * 4293 5867 3392 5114 5827 2941 * 3824 3168 3845 5728 * * * 8 0 * * * * * * 6145 0 0 R 9 4279 * 4641 3302 * 5447 5404 5042 1915 5852 5652 4340 * 3252 2405 3922 * 5747 * * 9 0 * * * * * * 6242 0 0 I 10 * * * * 5303 * * 438 * 4633 * * * * * * * 2689 * 4601 10 0 * * * * * * 6015 0 0 V 11 3285 4525 5908 2284 5528 5777 5260 3434 3883 5986 5829 5061 * * 2241 * 5036 3315 * * 11 0 * * * * * * 6030 0 0 E 12 3450 * 2790 2381 * 6365 6071 * 2793 * * 3884 * 2802 3828 3855 4322 * * * 12 0 * * * * * * 6061 0 0 A 13 2525 5417 5427 5820 6803 * * 1443 4600 3753 5687 * * * 5348 5188 3141 3788 * 6313 13 0 * * * * * * 6228 0 0 A 14 1279 5947 * * * * * 2096 * 4581 * * * * * 5456 5159 2029 * * 14 0 * * * * * * 6221 0 0 E 15 3638 * 6542 3037 * * 4907 4996 3976 2246 3593 3352 * 4341 4113 3701 4204 6158 * 6056 15 0 * * * * * * 6168 0 0 R 16 2859 * 3641 3001 * 4522 3956 * 2885 6008 * 4119 * 4023 3502 2480 6423 * * * 16 0 * * * * * * 6162 0 0 V 17 5978 5391 5089 5997 3886 * 3035 2322 6053 4352 * * * 6511 * * 2840 1796 * 5441 17 16 6479 * 1585 585 * * 6242 1000 0 P 18 4986 * 2951 3493 * 7381 4260 * 3839 6137 * 4299 1138 5211 4858 4595 * * * * 18 0 * * * * * * 6116 0 0 G 19 4473 * 3761 3188 * 721 * * 5280 5654 5729 5300 * 5453 4856 5836 * * * * 19 50 4881 * 0 * * * 6138 2065 0 V 20 4828 * * * * * * 2214 * 6320 * * * * * * 6211 530 5880 6182 20 20 * 6149 * * * * 6107 0 0 R 21 5393 6401 6053 3891 5745 * 4542 2954 2500 3152 4028 5248 * 5401 2975 5193 3579 4394 * 7633 21 0 * * * * 0 * 6099 0 1000 G 22 3573 * 2961 2881 * 2040 5022 * 5500 * * 3869 * 4817 3321 2965 5393 * * * 22 0 * * * * * * 6125 0 0 V 23 5097 3950 * * 5558 * 6716 2164 * 4146 6183 * 5656 * * 6105 6269 1079 * 4029 23 0 * * * * * * 6125 0 0 I 24 6495 * 3895 3335 * 4616 1045 6849 3768 * 6024 5189 6182 4399 4464 * 6419 5433 * 5014 24 23 * 6003 * * * * 6125 0 0 H 25 5675 6802 1977 3060 5578 6279 4332 * 3560 6135 * 3705 * 3628 3046 4255 4915 * 6154 4759 25 0 * * * * 0 * 6139 0 1000 L 26 5140 5120 * * 6159 * * 2249 * 1071 4235 * * * * * 5770 2547 * * 26 0 * * * * * * 6167 0 0 R 27 5203 * 6272 * 6247 6269 5184 5701 2045 5437 5880 7455 * 6017 996 5593 * 5371 * 4750 27 0 * * * * * * 6182 0 0 A 28 2014 6756 * * 6758 3165 6023 3712 * 4880 6210 * * * * 4070 1825 2821 * * 28 0 * * * * * * 6238 0 0 R 29 * * * 6004 5861 * 3409 6106 6117 * * 6693 * 5261 436 * * 5839 5754 4910 29 0 * * * * * * 6238 0 0 Y 30 5285 * 5571 4940 7452 4141 4064 5864 2784 3993 6133 5028 6121 4276 2712 3918 3900 6764 4475 3029 30 0 * * * * * * 6239 0 0 V 31 2913 4849 6202 * 4708 * 4150 3730 * 4050 3166 6089 6796 6923 * 2149 4793 3686 * 3236 31 16 6526 * 0 * * * 6239 1000 0 G 32 3918 * 6468 5774 * 239 * * * * 5773 * * 6479 * 6716 5806 * * * 32 35 5378 * 0 * * * 6266 1616 0 Q 33 4795 * 4863 3514 * 3833 4083 * 6308 5822 6110 2594 2903 3578 3978 2491 4512 * * * 33 0 * * * * * * 6266 0 0 D 34 4275 * 3216 4398 4913 5446 5266 6524 2922 4425 5403 4295 * 3513 3496 4485 3603 5633 6227 3178 34 0 * * * * * * 6266 0 0 I 35 4231 * * * 4978 * * 2197 3474 2995 5379 6203 * 5936 5296 5087 5584 2148 5150 3349 35 0 * * * * * * 6266 0 0 A 36 3850 * 6323 4327 2067 * 2948 4361 6584 3642 5750 6713 * 5085 4931 6694 5265 3931 5081 2839 36 26 5806 * 0 * * * 6266 1000 0 A 37 3158 6812 * * 5256 * * 1932 * 2581 3913 * * * * * 5862 1556 * * 37 0 * * * * * * 6266 0 0 D 38 * * 967 2047 * * 6298 * * * * 4524 * 4270 * 3406 5065 * * 6133 38 0 * * * * * * 6266 0 0 M 39 4170 4670 * * 3948 * * 2827 * 1543 2828 * * * * * 6950 2381 * 6028 39 0 * * * * * * 6266 0 0 I 40 * 6099 3870 3555 * 6147 929 6015 5045 * * 5423 * 5254 4826 6316 3885 3611 * * 40 0 * * * * * * 6266 0 0 I 41 5662 * * * * 5927 * 1098 * 2142 4177 * * * * * * 2219 * * 41 0 * * * * * * 6270 0 0 G 42 4390 5210 5858 2298 6129 5385 6481 4528 5320 2694 5343 6925 * 4088 4411 3714 3387 3243 5927 * 42 0 * * * * * * 6270 0 0 V 43 4818 * * * 4488 * * 3655 * 2547 4283 * * * * * 5373 751 * * 43 0 * * * * * * 6339 0 0 D 44 4787 7025 988 6718 * 6566 6154 * * 6394 * 4297 2574 6527 3971 3317 * 6344 * * 44 0 * * * * * * 6339 0 0 P 45 4031 5891 4278 4135 * 2238 6954 * 3850 6273 * 5041 1599 5476 5028 3533 * * 6487 * 45 0 * * * * * * 6339 0 0 E 46 3578 * 2255 3820 5668 4677 4532 * 4581 * 5605 2774 * 3903 4201 2997 4013 * * 5874 46 54 * 4756 * * * * 6339 0 0 N 47 * * 6288 * * * * 2794 5720 1641 1465 5119 * 5043 * 6611 5251 6135 5734 6316 47 0 * * * * 0 * 6258 0 2122 T 48 * 7136 4451 6036 * * 5454 6703 6265 6165 5677 4139 3447 * 5368 1562 1549 * * * 48 0 * * * * * * 6339 0 0 V 49 4681 * * * 6277 * * 2707 * 1785 * * * * * * 5809 1038 * * 49 0 * * * * * * 6309 0 0 E 50 3052 5151 5656 2469 4629 5321 4701 6434 3002 4337 5935 5877 * 4300 4151 2914 6118 5456 6786 4582 50 0 * * * * * * 6309 0 0 Q 51 4955 * 2705 1117 7269 * * 6616 3707 5836 * 5069 * 3040 4016 6926 6559 6551 * * 51 0 * * * * * * 6231 0 0 A 52 1111 6121 * * * 2363 * 5941 * * 6568 * * * * 2179 4606 4658 * * 52 0 * * * * * * 6231 0 0 H 53 5120 * 4789 5926 5603 * 306 * * * * 5275 * * 6201 6100 * * * 4824 53 0 * * * * * * 6231 0 0 E 54 2641 * 2481 2969 * * 6485 5060 3727 5377 6096 5390 * 3860 3033 4821 4950 5861 5832 4057 54 0 * * * * * * 6231 0 0 I 55 6280 * * * * * 5867 644 6692 2280 6122 * * 6075 5938 * 7614 3967 * * 55 0 * * * * * * 6167 0 0 C 56 1239 3948 * 5480 * 3051 * 4039 * * 7783 6280 * * 5917 2758 3965 4013 * * 56 0 * * * * * * 6141 0 0 E 57 4538 * 1970 2104 * 5688 3010 * 5012 4808 * 4570 * 3309 4751 5183 6519 4636 * * 57 0 * * * * * * 6141 0 0 A 58 2670 5688 3928 2382 6771 * 4813 5580 3772 6264 7516 4725 * 3339 3256 3190 4508 6170 * * 58 0 * * * * * * 6141 0 0 V 59 3934 6506 * * 6596 * * 2151 * 2641 6019 * * * * * * 965 * * 59 0 * * * * * * 6141 0 0 Q 60 4944 * * 1020 * * 4793 * 3064 * * * * 3003 2623 6062 5911 * * * 60 0 * * * * * * 6077 0 0 A 61 2689 * 3603 2722 * * 4775 6487 2650 4884 6885 4141 * 5402 3253 3365 4209 5994 * 6676 61 0 * * * * * * 5983 0 0 A 62 1727 * * 3391 * 4786 5337 * 2916 4749 * 4310 * 5805 2543 4411 3832 * * 6062 62 0 * * * * * * 5957 0 0 V 63 6159 * * * * * * 1063 * 2286 3877 * * * * * * 2093 * * 63 0 * * * * * * 5957 0 0 C 64 3391 3736 5654 3309 5220 5715 5850 3842 2837 2865 3363 * * 6127 3362 4776 * 6067 * 4698 64 53 * 4788 * * * * 5710 0 0 G 65 1606 * 3948 2829 * 3885 5249 * 3946 * * 5001 * 4148 3514 3265 5166 * * * 65 42 5108 * 0 * 0 * 5705 1000 1625 K 66 2516 * 4131 2454 * * * * 1620 * * 3880 * 5573 2723 5647 * * * * 66 27 * 5731 * * * * 5694 0 0 I 67 * * 4752 4796 2637 * * 1578 * 2710 5196 * * * 4203 * * 4345 * 2761 67 0 * * * * * 0 5936 0 1000 R 68 4108 * 2759 3656 * 5201 4695 * 3260 * * 4943 1494 * 3654 4485 * 4916 * * 68 0 * * * * 0 * 5814 0 1000 R 69 * 4745 2914 3253 5172 3856 2955 5628 * 5302 * 3668 * 3645 2725 3848 * 3747 * * 69 114 3718 * 2434 295 * * 5814 2083 0 I 70 3061 * * 5657 5184 * 4699 2036 * 3680 5768 * * * 4927 * 4889 1552 * 4428 70 29 5664 * 0 * * * 5814 1000 0 E 71 2551 4737 2781 3027 4306 * 5204 * 2764 5628 * * * * 3823 3053 4710 5506 * 5197 71 155 3764 5155 478 1827 * * 5814 2125 0 S 72 5098 * 1965 3159 4896 4271 3904 4831 * * 4184 5116 5167 * * 3346 3004 3630 * * 72 43 5079 * 0 * * 0 5796 1000 1000 L 73 5119 * * * * * * 1774 * 2765 3799 * * * * * * 1121 * * 73 100 3903 * 0 * 0 * 5796 1419 1000 H 74 * * * * 4213 * 1089 3894 5203 3787 3925 4679 * 4752 4646 * 3650 5196 * 5619 74 0 * * * * * * 5816 0 0 V 75 5085 5088 * * 4943 * * 2167 * 4833 4086 * * * * * * 756 * * 75 0 * * * * * * 5816 0 0 S 76 * * 2277 4481 * * 1170 * * * * 3292 4981 4978 4616 4089 4666 * * * 76 57 4700 * 2000 415 * * 5599 1000 0 A 77 3312 * * * 4512 * * 3603 * 3358 5180 * 2436 * * * 3966 1630 * 3714 77 32 5498 * 1585 585 * * 5482 1000 0 E 78 * * 2861 820 * 4867 4626 3838 * 4817 * 4833 * 4793 * * * 4486 * * 78 219 2829 * 1430 669 * * 5415 2300 0 A 79 2948 4641 3953 4188 * 3579 * * * * * * 1406 * * 3744 4565 2910 * * 79 172 3598 5067 1318 739 * * 5429 1658 0 R 80 * 4037 4721 2485 * * 2705 * 3518 4591 * * * 3321 2533 4403 * * * 3055 80 91 * 4036 * * 0 * 5411 0 1000 E 81 * * 4349 921 * * 4299 * 3138 * * 2998 3417 * * * 4666 * * * 81 0 * * * * 0 * 5277 0 1000 I 82 * * 3718 4255 * 4497 * 2216 * 2255 4009 * * 4429 * 3188 4599 2806 * * 82 138 4259 4678 2807 222 * * 5377 1000 0 G 83 * * 3543 * 4088 1259 3159 * 3294 * 4360 3170 * 3971 * * * * * * 83 0 * * * * * 0 5661 0 1000 D 84 * * 1908 1570 * * 4244 * * * * * * 3896 * 3285 3035 4261 * * 84 92 * 4018 * * * 0 5636 0 1000 T 85 3791 * 4103 2893 * * * 2562 * * * 4261 * * 3769 2942 1689 * * * 85 0 * * * * 1018 982 5500 0 1620 T 86 * * 4102 * * * 3703 * 2972 * * * 2297 * 3941 2597 2020 4130 * * 86 0 * * * * 0 * 5398 0 1000 K 87 3552 4128 * * * * * * 895 * * * * 2802 * 3170 * 3933 * * 87 0 * * * * * * 5195 0 0 P 88 * * * 2859 * * * * 3615 3441 * * 760 * * * 3348 * * * 88 0 * * * * * * 4411 0 0 S 89 3198 * * * * * * * * 2286 * 3465 * 3297 * 2051 2391 4018 * * 89 0 * * * * * * 4164 0 0 F 90 * * * 3157 853 * * * * * * * * * * * * 2988 * 2265 90 223 * 2805 * * * * 4154 0 0 S 91 * * * 2907 * 2834 * 2666 * * * 1862 * * * 2827 2710 * * * 91 214 2857 * 1000 1000 0 * 3578 1000 1000 D 92 * * 1987 1132 * * * * * * * * * * * 2758 2801 * * * 92 0 * * * * * * 3630 0 0 Q 93 2758 * * * * * * * 1763 * * * * 2935 3042 2801 2628 * * * 93 0 * * * * * * 3630 0 0 P 94 2424 * * * * * * * * * * * 297 * * * * * * * 94 0 * * * * * * 3390 0 0 L 95 1585 * * * * * * * * 1546 * * * * * * * 1625 * * 95 0 * * * * * * 2155 0 0 S 96 1585 * * * * * * * * * * * * * * 1546 1625 * * * 96 0 * * * * * * 2155 0 0 F 97 * * * * 1546 * * * * * * * * * * 1625 * 1585 * * 97 0 * * * * * * 2155 0 0 D 98 * * 0 * * * * * * * * * * * * * * * * * 98 0 * * * * * * 2155 0 0 E 99 * * * 565 * * * * 1625 * * * * * * * * * * * 99 0 * * * * * * 2155 0 0 V 100 * * * * * * * * * * * * * * * * * 0 * * 100 0 * * * * * * 1000 0 0 M 101 * * * * * * * * * * 0 * * * * * * * * * 101 0 * * * * * * 1000 0 0 L 102 * * * * * * * * * 0 * * * * * * * * * * 102 0 * * * * * * 1000 0 0 S 103 * * * * * * * * * * * * * * * 0 * * * * 103 0 * * * * * * 1000 0 0 K 104 * * * * * * * * 0 * * * * * * * * * * * 104 0 * * 0 * * * 1000 0 0 //