HHsearch 1.5 NAME c6f62A_ FAM FILE c6f62A_ COM /bmm/www/servers/phyre2/HH/hhmake -i c6f62A_.a3m DATE Sat Jun 9 08:30:17 2018 LENG 105 match states, 105 columns in multiple alignment FILT 11 out of 15 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.5 EVD 0.4517 0.1220 SEQ >ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHC >sa_dssp EEEEEDDDEEDCDDEEEEEEEDCDDDEEEDDEDEDDDEEEEDEEDEDEDEEEECEEEEDEEEDECDEEEDDEEEEEEDEEDEDEDEEDEEEEDDEEEEDD DEEEE >ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHHCC >ss_conf 9769999999999998888644456779999998775679999999999998201478999999864339998644656999999999999999999999 74239 >Consensus xxxelySKLxxEaEKIkxWKlxxesexxqkERkxqenxkiIEaQrKaIqELQxxnExxsxKlxexxxxnxxxxxkxxxtrxLcnxlKxtxqxtxEKxxxx ExxkE >c6f62A_ GLSRVYSKLYKEAEKIKKWKVSTEAELRQKESKLQENRKIIEAQRKAIQELQFGNEKVSLKLEEGIQENKDLIKENNATRHLCNLLKETCARSAEKTKKY EYERE >UniRef50_Q3MUI3(92-193:895) Synaptonemal complex protein 1 n=1 Tax=Oryzias latipes RepID=Q3MUI3_ORYLA E=3e-27 s/c=1.20 id=61% cov=98% ---ELYSKLFDEIEKIKFWKVKVESETMQQERKLQESKITIETQRKAIQELQFGNESLSVKLEEQIGENEDLRNKNSATRNLCNILKETFQWSTEKMQLF ESERE >UniRef50_UPI000180CCE9(33-129:956) PREDICTED: similar to protein kinase C substrate 80K-H n=1 Tax=Ciona intestinalis RepID=UPI000180CCE9 E=5e-19 s/c=0.99 id=32% cov=93% --------LKTEAEKIRIWNLQGDLRRQELERAVHDLTITVESQRKSLLEVQMEGEAVSTKMHEEIGKRSICLQKIDSTRELCNLLKSQVYDLSDTLKLC EGYKE >UniRef50_UPI0000E816F3(41-145:481) PREDICTED: similar to CTCL tumor antigen se2-1 n=1 Tax=Gallus gallus RepID=UPI0000E816F3 E=1e-06 s/c=0.51 id=45% cov=100% -MNELYSKLYKEAEKIKRWKLAVESELKQKERKFQENRKIIEAQRKAIQELQAnEHEREETRQLYEELNNNIEATQESLETELQSTVKALIQVTQEKETQ MEECKE >UniRef50_Q7ZVL0(1-290:537) Sycp1 protein (Fragment) n=3 Tax=Danio rerio RepID=Q7ZVL0_DANRE E=3e-49 s/c=0.30 id=59% cov=101% RSSQLYSKLLDEAEKIKLWKFRTDSDISQKDRKIQENRKTIETQRKAIQELQFANESLSIKLEDQLNENEDLRNKTNATRNLCNILKDTFERSAEKMNFF EAERE >UniRef50_UPI0000E816F3(1-234:481) PREDICTED: similar to CTCL tumor antigen se2-1 n=1 Tax=Gallus gallus RepID=UPI0000E816F3 E=4e-12 s/c=0.30 id=48% cov=100% TMNELYSKLYKEAEKIKRWKLAVESELKQKERKFQENRKIIEAQRKAIQELQANEHEReeTRQLYEELNNNIEATQESLETE-LQSTVKALIQVTQEKET QMEECKE >UniRef50_UPI0000ECA156(1-301:972) Synaptonemal complex protein 1 (SCP-1). n=1 Tax=Gallus gallus RepID=UPI0000ECA156 E=4e-62 s/c=0.54 id=73% cov=101% TMNELYSKLYKEAEKIKRWKLAVESELKQKERKFQENRKIIEAQRKAIQELQFENEKLSLKLEDEICENKDLLKENSASRHLCNLLKETCSHFTEKSTKY EHERE >UniRef50_UPI00017B2603(9-241:808) UPI00017B2603 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B2603 E=2e-53 s/c=0.69 id=48% cov=101% NSVQLFSKLFDEVEKIRCWKVQTDCDATEKERKLQESKRIIENQNRTIQELQFCNESLNMKLQEQADDNESLRNKNNATKNMCNILKDTFQRTAEKMQIF ESERE >UniRef50_UPI000194E9D0(653-922:948) PREDICTED: similar to synaptonemal complex protein 1 n=1 Tax=Taeniopygia guttata RepID=UPI000194E9D0 E=6e-30 s/c=0.53 id=42% cov=100% TMNELFSKLYKEAEKIKQWKLTVESELDEKERKLQEDKKIIEAQNKTIQELQAIKEEAE-KVDKFEKECKLEVTQKNLETEFQTTVKTLIQVTREKEEKE EECKK >UniRef50_UPI00016E73EA(89-192:905) UPI00016E73EA related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E73EA E=7e-23 s/c=1.47 id=43% cov=100% -SVQLFSKLFDEVEKIRCWKVQTNSDNVEKERRLHQNGRTIESLQRTIQELQFCNESLSMKMQEHLDDIENLRNKNNVTKNLCNTLNDTFQRTAEKIQLF ESERE # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 2721 * * * * * 2427 * * 2638 * 995 * * * 1 0 * * * * * * 2074 0 0 L 2 * * * * * * * * * 3037 1039 * * * * 1353 * * * * 2 0 * * * * * * 2205 0 0 S 3 * * * * * * * * * * * 1039 * * * 2039 * 1889 * * 3 0 * * * * * * 2205 0 0 R 4 * * * 864 * * * * * * * * * 1541 3228 * * * * * 4 0 * * * * * * 2211 0 0 V 5 * * * * * * * * * 163 * * * * * * * 3228 * * 5 0 * * * * * * 2211 0 0 Y 6 * * * * 1437 * * * * * * * * * * * * * * 665 6 0 * * * * * * 2211 0 0 S 7 * * * * * * * * * * * * * * * 0 * * * * 7 0 * * * * * * 2211 0 0 K 8 * * * * * * * * 0 * * * * * * * * * * * 8 0 * * * * * * 2211 0 0 L 9 * * * * * * * * * 0 * * * * * * * * * * 9 0 * * * * * * 2516 0 0 Y 10 * * * * 1864 * * * 2581 3497 * * * * * * * * * 1090 10 0 * * * * * * 2516 0 0 K 11 * * 1461 * * * * * 1090 * * * * * * * 2581 * * * 11 0 * * * * * * 2516 0 0 E 12 * * * 0 * * * * * * * * * * * * * * * * 12 0 * * * * * * 2516 0 0 A 13 463 * * * * * * 3677 * * * * * * * * * 2347 * * 13 0 * * * * * * 2516 0 0 E 14 * * * 0 * * * * * * * * * * * * * * * * 14 0 * * * * * * 2516 0 0 K 15 * * * * * * * * 0 * * * * * * * * * * * 15 0 * * * * * * 2516 0 0 I 16 * * * * * * * 0 * * * * * * * * * * * * 16 0 * * * * * * 2516 0 0 K 17 * * * * * * * * 652 * * * * * 1459 * * * * * 17 0 * * * * * * 2516 0 0 K 18 * 2347 * * 3677 * * 2581 3485 3497 * * * 3155 1900 * * * * * 18 0 * * * * * * 2516 0 0 W 19 * * * * * * * * * * * * * * * * * * 0 * 19 0 * * * * * * 2516 0 0 K 20 * * * * * * * * 264 * * 2581 * * * * * * * * 20 0 * * * * * * 2516 0 0 V 21 * * * * 3497 * * * * 869 * * * * * * * 1458 * * 21 0 * * * * * * 2516 0 0 S 22 1900 * * * * * * * 3677 * * * * 1459 3497 3485 3155 * * * 22 0 * * * * * * 2516 0 0 T 23 * * * * * 2581 * * * * * * * * * * 1417 1125 * * 23 0 * * * * * * 2516 0 0 E 24 * * 1533 868 * * * * * * * 3229 * * * * * * * * 24 0 * * * * * * 2516 0 0 A 25 3485 3475 * * * * * * * 2581 * * * * * 613 * * * * 25 0 * * * * * * 2516 0 0 E 26 * * 1810 868 * * * * * * * * * * 2581 * * * * * 26 0 * * * * * * 2516 0 0 L 27 3475 * * * * * * 3497 * 1090 * 3229 * * 2581 * 3677 * * * 27 0 * * * * * * 2516 0 0 R 28 * * 3155 * * * * * 1900 * 3677 * * 2581 3485 3497 3475 3229 * * 28 0 * * * * * * 2516 0 0 Q 29 * * * 1071 * * * * * * * * * 932 * * * * * * 29 0 * * * * * * 2516 0 0 K 30 * * * * * * * * 406 2581 * * * 3677 * * * * * * 30 0 * * * * * * 2516 0 0 E 31 * * 3497 134 * * * * * * * * * * * * * * * * 31 0 * * * * * * 2516 0 0 S 32 * * * * * * * * * * * * * * 135 3485 * * * * 32 0 * * * * * * 2516 0 0 K 33 2581 * * * * * * * 461 * * * * * 3229 * * * * * 33 0 * * * * * * 2516 0 0 L 34 * * * * 1900 * * 3497 * 1070 * * * * * * * 2581 * * 34 0 * * * * * * 2516 0 0 Q 35 * * * * * * 1869 * * * * * * 461 * * * * * * 35 0 * * * * * * 2516 0 0 E 36 * * 2581 461 * * * * * * * * * 3229 * * * * * * 36 0 * * * * * * 2516 0 0 N 37 * * 3155 * * * * * * 2581 * 856 * * * 2573 * * * * 37 0 * * * * * * 2516 0 0 R 38 * * * * * 3229 * * 1835 * * * * * 1165 * 2581 * * * 38 0 * * * * * * 2516 0 0 K 39 * * * * * * * 2028 841 * * * * * 2347 * * * * * 39 0 * * * * * * 2516 0 0 I 40 * * * * * * * 838 * * * * * * * * 1183 * * * 40 0 * * * * * * 2516 0 0 I 41 * * * * * * * 264 * * * * * * * * * 2581 * * 41 0 * * * * * * 2516 0 0 E 42 * * * 0 * * * * * * * * * * * * * * * * 42 0 * * * * * * 2516 0 0 A 43 1090 * * * * * * * * * * 3475 * * * 1869 2584 * * * 43 0 * * * * * * 2516 0 0 Q 44 * * * * * * * * * 3229 * * * 163 * * * * * * 44 0 * * * * * * 2516 0 0 R 45 * * * * * * * * * * * 2306 * 3229 533 * * * * * 45 0 * * * * * * 2516 0 0 K 46 * * * * * * * * 316 * * * * * 2347 * * * * * 46 0 * * * * * * 2516 0 0 A 47 932 * * * * * * * * * * * * * * 2581 1695 * * * 47 0 * * * * * * 2516 0 0 I 48 * * * * * * * 264 * 2581 * * * * * * * * * * 48 0 * * * * * * 2516 0 0 Q 49 * * * * * * * * * 2581 * * * 264 * * * * * * 49 0 * * * * * * 2516 0 0 E 50 * * * 0 * * * * * * * * * * * * * * * * 50 0 * * * * * * 2516 0 0 L 51 * * * * * * * * * 264 * * * * * * * 2581 * * 51 0 * * * * * * 2516 0 0 Q 52 * * * 4476 * * * * * * * * * 66 * * * * * * 52 0 * * * * * * 2619 0 0 F 53 1756 * * * 910 * * * * * 2542 * * * * * * * * * 53 138 3456 * 0 * * * 2619 1000 0 G 54 3570 2394 * 1428 * 2747 * 3184 * * * 3396 * * * * * * * * 54 0 * * * * * * 2619 0 0 N 55 * * * 3396 * 2542 3456 * 3184 * * 910 * * * * * * * * 55 0 * * * * * * 2619 0 0 E 56 * * * 144 * * 3396 * * * * * * * * * * * * * 56 0 * * * * * * 2619 0 0 K 57 2542 * * 2286 * * * * 2447 * * * * * 3456 1519 * * * * 57 0 * * * * * * 2619 0 0 V 58 3184 * * 3456 * * * * * 1128 * * * * 3396 * * 2022 * * 58 144 3396 * 1000 1000 * * 2619 1000 0 S 59 * * * 2314 * * 4476 * * * * 3539 * * * 804 3396 * * * 59 168 * 3184 * * * * 2619 0 0 L 60 * * * * * * * 3452 * 2294 2248 * * * 3166 * 1732 3612 * * 60 0 * * * * 0 * 2498 0 1000 K 61 * * * * * * * * 297 * * * * 3396 3456 * * * * * 61 0 * * * * * * 2619 0 0 L 62 * * * * * * * * * 935 1858 * * 3456 * * * 3184 * * 62 0 * * * * * * 2619 0 0 E 63 * * 3184 1548 * * 2542 * * 3456 * * * 2394 * * * * * 3396 63 0 * * * * * * 2619 0 0 E 64 * * 2374 723 * * * * 3184 * * * * * * * * * * 3456 64 0 * * * * * * 2619 0 0 G 65 * * * 1100 3184 3745 3262 * * * * * * 2032 * * * * * * 65 0 * * * * * * 2619 0 0 I 66 3539 * * 2314 * * * 1220 * 1819 * * * * * * * * * * 66 0 * * * * * * 2619 0 0 Q 67 * 3201 2394 * * 2023 * * 3184 3456 * 2480 * 3745 * * * * * * 67 0 * * * * * * 2619 0 0 E 68 * * 2394 1146 * * * * 2542 * * 2426 * * * * * * * * 68 0 * * * * * * 2619 0 0 N 69 * 3184 * * * * * 3262 * * * 704 * * 2542 * * * * * 69 0 * * * * * * 2619 0 0 K 70 * * * 1519 * * * 3396 1769 * * 3456 * * * 2542 * * * * 70 0 * * * * * * 2619 0 0 D 71 * * 1548 3396 * * * 1928 * 3184 * 3262 * * * 3539 * * * * 71 0 * * * * * * 2619 0 0 L 72 3396 2542 * 2314 * * * * * 910 * * * * * * * * * * 72 0 * * * * * * 2619 0 0 I 73 3456 * * * * * * 3745 * 1834 * * * * 1519 * 3396 3184 * * 73 0 * * * * * * 2619 0 0 K 74 * * * * * * * * 2447 * * 1519 * 1907 * * 2314 * * * 74 0 * * * * * * 2619 0 0 E 75 * * * 1845 * * * * 942 * * * * 2314 * * * * * * 75 0 * * * * * * 2619 0 0 N 76 4476 * * 3456 * * * 2542 3184 * * 1311 * * * 3396 3570 * * * 76 0 * * * * * * 2619 0 0 N 77 4476 * 2542 * * * * * * 3396 * 1123 * * * 2125 * * * * 77 0 * * * * * * 2619 0 0 A 78 1225 * * 3396 * * * * * 2314 * * * * * 2542 * 3262 * * 78 0 * * * * * * 2619 0 0 T 79 * * * 2314 * * * * * * * * * * * 3201 535 * * * 79 0 * * * * * * 2619 0 0 R 80 * * * 3396 * * * * 2394 * * * * * 961 * 2314 * * * 80 144 * 3396 * * * * 2619 0 0 H 81 * * * 1243 * * 2299 * * * * 1418 * * * * * * * * 81 0 * * * * 0 * 2559 0 1000 L 82 * * * * 3184 * * * * 315 3539 * * * * * * * * * 82 0 * * * * * * 2619 0 0 C 83 * 507 * * * * * * * * * * * 1756 * * * * * * 83 0 * * * * * * 2619 0 0 N 84 * * * * * * * * * * * 507 * * * 2426 3184 * * * 84 0 * * * * * * 2619 0 0 L 85 * * * * * * * 2032 * 1494 * * * * * * 1320 * * * 85 0 * * * * * * 2619 0 0 L 86 * * * * * * * * * 507 * * * * * * * 1756 * * 86 0 * * * * * * 2619 0 0 K 87 * * * * * * * * 159 * * 3262 * * * * * * * * 87 0 * * * * * * 2619 0 0 E 88 2426 * 1865 1956 * * * * * * * * * * * 2542 3184 * * * 88 0 * * * * * * 2619 0 0 T 89 * * * * * * * * * 1756 * * * 2542 * * 910 * * * 89 0 * * * * * * 2619 0 0 C 90 * 2447 * * 1519 * * 1756 * * * * * * * * * 2542 * * 90 0 * * * * * * 2619 0 0 A 91 3745 * * 3570 * * * * * * * * * 834 * 3970 4476 * * 2542 91 0 * * * * * * 2619 0 0 R 92 * * 2542 * * * 3201 * * * * * * * 1518 * * 1756 3750 * 92 0 * * * * * * 2619 0 0 S 93 * * * * 3201 * * * * 2542 * * * * * 2101 1040 * * * 93 0 * * * * * * 2619 0 0 A 94 1518 * * * * * * * * * * * * 2426 3184 2542 2450 * * * 94 0 * * * * * * 2619 0 0 E 95 * * 2542 272 * * * * * * * * * * * * * * * * 95 0 * * * * * * 2619 0 0 K 96 * * * * * * * * 272 * * * * * * * 2542 * * * 96 0 * * * * * * 2619 0 0 T 97 * * * 1756 * * * 3262 * 2542 2032 * * * * 3970 3064 * * * 97 0 * * * * * * 2619 0 0 K 98 * * * 3184 * * * * 2022 * * 3570 * 1918 * 4476 2001 * * * 98 0 * * * * * * 2619 0 0 K 99 * * * * 3570 * * 3539 1769 1513 * * * 2426 * * * * * * 99 0 * * * * * * 2619 0 0 Y 100 * 2542 * 3184 1519 * * * * * 2426 * * * * * * * * 2447 100 0 * * * * * * 2619 0 0 E 101 * * * 0 * * * * * * * * * * * * * * * * 101 0 * * * * * * 2619 0 0 Y 102 3570 * * 1756 * 2542 3970 * * * * * * 4476 * 1918 * * * 3745 102 0 * * * * * * 2619 0 0 E 103 * 1756 * 910 * * * * * * * * * * * * * * * 2542 103 0 * * * * * * 2619 0 0 R 104 * * * * * * * * 964 * * * * * 1037 * * * * * 104 0 * * * * * * 2619 0 0 E 105 * * * 168 * * * * 3184 * * * * * * * * * * * 105 0 * * 0 * * * 2619 0 0 //