HHsearch 1.5 NAME c6f36E_ FAM FILE c6f36E_ COM /bmm/www/servers/phyre2/HH/hhmake -i c6f36E_.a3m DATE Sat Dec 23 09:06:45 2017 LENG 73 match states, 73 columns in multiple alignment FILT 54 out of 58 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.8 EVD 0.4298 -0.3047 SEQ >ss_dssp CCHHHHTTHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >sa_dssp EEEEDDDEEDCDECDEDDEEBDEDCDECDDECEECDEEDEEECEDCDEEBEECDDECCDDBEEBCEDBEEDCE >ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >ss_conf 9889999999999999985066679999999999962796458889999999999999999999999999709 >Consensus xxxxaxxxiGaGlaxixxxGxgiGxGxxxxxxvxxvaRnPexxxxixxxxilGxAxxEsxxIyalviaxillF >c6f36E_ SVLAASKMVGAGCATIALAGVGAGLGVMFGSLINGAARNPNIAKQLVGYALLGFALTESIALFSLLVVFLILF >UniRef50_Q602A0(27-99:101) ATP synthase subunit c n=4 Tax=Mycoplasma RepID=ATPL_MYCH2 E=7e-05 s/c=0.66 id=38% cov=101% SNLKAFAYLGAGLAMIGVIGVGAGQGYAAGKACDAIARNPEAQKQVFRVLVIGTAISETSSIYALLVALILIF >UniRef50_A0LDW7(4-72:75) ATP synthase F0, C subunit n=4 Tax=Bacteria RepID=A0LDW7_MAGSM E=1e-05 s/c=0.73 id=39% cov=96% ---AAAAFIGMGLAAAGMAGSGIGLGYLFGKTIESIARQPGAEAQMTKYMWIGAAFVEAVALYGLVIAFIIM- >UniRef50_C5LFG9(115-184:186) Putative uncharacterized protein n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5LFG9_9ALVE E=6e-12 s/c=1.03 id=32% cov=97% ---AGTSVLGAAIAVVAVGGCAQGIGQLFAALVVGIARNPSMKEDLFTYTLIGMGFLEFLAILVILIAGVLLY >UniRef50_UPI0001C315C5(22-91:92) ATP synthase F0, C subunit n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C315C5 E=0.0006 s/c=0.65 id=33% cov=96% ----AGRAIGLGLGTgLAALGTGVGLGFIFGKTIEAVSRQPELRDDIQSIQWLGFALTEATVFYGFIAGLIAFF >UniRef50_C6JPH3(3-75:132) F0F1 ATP synthase subunit C n=2 Tax=Fusobacterium RepID=C6JPH3_FUSVA E=6e-11 s/c=0.94 id=30% cov=101% AIVLGASAIGAGCAMIAGLGAGIGEGYAAGKAVEAVVKIPEQKGNIITTMILGQAVAESTGIFALVVALILLY >UniRef50_B1AIC5(40-107:109) ATP synthase subunit c n=15 Tax=Ureaplasma RepID=ATPL_UREP2 E=4e-06 s/c=0.78 id=31% cov=93% ------KYIGTGITMLAAGAVGLMQGFSTANAVQAVARNPEAQPKILSTMIVGLALAEAVAIYALIVSILIIF >UniRef50_C4K0P2(5-73:74) ATP synthase subunit c n=26 Tax=cellular organisms RepID=ATPL_RICPU E=6e-05 s/c=0.70 id=35% cov=93% ------KFIGTGLMAIGMYGAALGVSNIFSSLLSSIARNPSATENLQRMALIGAGLAEAMGLFSFVIAMLLIF >UniRef50_C9KMG1(4-77:83) ATP synthase subunit c n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMG1_9FIRM E=0.0009 s/c=0.61 id=30% cov=101% AIMVAAALVGAGLCMgLAAIGAGLGDGLVTSRFIEGITRQPEAQSKLFTNTLISVGLIESMAIIATVVALIMLY >UniRef50_Q1Q3F6(6-72:108) ATP synthase subunit c n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q3F6_9BACT E=5e-06 s/c=0.78 id=24% cov=92% -----ALVIGIPVVAVAAFGCALAQAKVVSSAVESMARQPSVAAKVQLAMIIGIAFIESLAIYSLMISFML-- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * S 1 1286 * * * * * * * * * * * * * * 1438 2179 * * * 1 0 * * * * * * 2944 0 0 V 2 * * * * 3646 * * 1604 * 2490 2360 3728 * * * * * 2808 * * 2 0 * * * * * * 3010 0 0 L 3 4226 * * * * * * 2526 * 1802 3494 * * * * * * 1331 * * 3 0 * * * * * * 3027 0 0 A 4 1360 * * 2899 * * * * 4216 2499 * * * 2983 * 4236 * 3925 * * 4 0 * * * * * * 3313 0 0 A 5 902 * * * * 1435 * * * 4761 * * * * * 5442 * 4831 * * 5 0 * * * * * * 3497 0 0 S 6 1050 * * * 4828 3544 * * * 3850 3592 * * * * 3995 5056 2727 * * 6 0 * * * * * * 3612 0 0 K 7 1787 * * * * * 5127 * 1781 4446 * * * 4824 3104 2372 * * * * 7 0 * * * * * * 3717 0 0 M 8 3284 * 5534 5849 3372 * * 4241 5353 3475 2887 5345 * * * 4311 5154 2744 * 2272 8 0 * * * * * * 3791 0 0 V 9 * * * * 4874 * * 1007 * 1737 * * * * * * * 2572 * * 9 0 * * * * * * 3769 0 0 G 10 3738 * * * * 338 * * * * * * * * * 3776 4030 * * * 10 0 * * * * * * 3759 0 0 A 11 489 5511 * * * 5477 * 4885 * 4784 4433 * * * * * 3729 5097 * 5504 11 0 * * * * * * 3759 0 0 G 12 3211 * * * * 319 * * 5201 * * * 4885 * * 5097 * * * * 12 0 * * * * * * 3759 0 0 C 13 4923 3914 * * * * * 1971 * 1034 5107 * * * 5201 5497 * 3661 * * 13 0 * * * * * * 3759 0 0 A 14 581 4115 5201 * * 4784 * * * 5097 5230 * * * * 5609 3323 4885 * * 14 50 4878 * 0 * * * 3759 1000 0 T 15 1803 * * * * * * 4524 * 3552 1811 * * * * 5430 2661 3078 * * 15 256 2622 * 0 * * * 3759 2455 0 I 16 5385 * * * 3953 * * 1081 * 2732 3505 * * * * * 5116 2544 * * 16 32 * 5515 * * * * 3759 0 0 A 17 1179 * * * * 1186 * * 5190 * * * * * * 3901 5360 * * * 17 0 * * * * * 0 3750 0 1000 L 18 1578 5137 * * * 2775 * 5463 * 2598 3756 * * * * 4045 * 2572 * * 18 0 * * * * * 0 3750 0 1000 A 19 2440 * * * 3556 2115 * 2022 * 3183 4911 * * * * * 3579 * * 5239 19 0 * * * * 0 * 3766 0 1000 G 20 5419 * * * 5259 276 * * * 4808 4298 * * * * * 5836 5610 * * 20 0 * * * * * * 3794 0 0 V 21 2261 3082 * * * 5250 * * * * * * 2770 * * 2914 3682 1787 * * 21 0 * * * * * * 3854 0 0 G 22 2063 * * * * 515 * * * * * * * * * 4038 * * * * 22 0 * * * * * * 3829 0 0 A 23 3154 * * * * * * 1759 5372 2223 5862 * * 3544 5254 * * 2153 * * 23 0 * * * * * * 3832 0 0 G 24 5222 * * * * 75 * * * * 5385 * * * * * * * * * 24 0 * * * * * * 3832 0 0 L 25 * * 5228 2578 * * * 1937 * 2981 5714 * * 1793 * * * 3177 * * 25 0 * * * * * * 3832 0 0 G 26 4399 * * * * 108 * * * * * * * * * 5341 * * * * 26 0 * * * * * * 3832 0 0 V 27 5478 * * 5254 3017 * * 3975 5222 2639 4776 2380 * 4782 5656 5076 3005 5516 * 3107 27 0 * * * * * * 3832 0 0 M 28 1555 * * * * 4720 * 2303 * 2956 5515 * * * * 5386 * 2032 * * 28 0 * * * * * * 3809 0 0 F 29 2137 * * * 1224 4852 * * * 4009 * * * * * 5251 3771 2979 5541 * 29 0 * * * * * * 3809 0 0 G 30 1713 * * * * 1544 * * 4720 * * * * 4489 6131 2225 5372 * * 5850 30 0 * * * * * * 3809 0 0 S 31 2153 5474 * * * 3878 4158 * 1919 5251 * 3659 * 5879 4626 2550 5028 * * * 31 0 * * * * * * 3809 0 0 L 32 1071 5251 * * 4451 5355 * * * 1571 * * * * * * 3825 * * 5596 32 0 * * * * * * 3809 0 0 I 33 3619 3034 * * * * * 1719 * 3649 4273 5768 * * * * * 1543 * * 33 0 * * * * * * 3809 0 0 N 34 4650 * 3785 1256 * 5189 5796 4004 * 4198 4841 3482 * 4828 * 3550 5251 4815 * * 34 0 * * * * * * 3809 0 0 G 35 1330 * * * * 1366 * * * * * * * * * 2597 5541 * 5189 * 35 0 * * * * * * 3809 0 0 A 36 5515 5474 * * * * * 1782 * 5251 3136 * * * * * 3107 1482 * 4300 36 0 * * * * * * 3809 0 0 A 37 750 * * * * 2032 * * * * * * * * * 3413 4519 5411 * * 37 0 * * * * * * 3809 0 0 R 38 * * * * * * * * 4543 * 5559 * * * 96 * * * * * 38 0 * * * * * * 3809 0 0 N 39 * * * * * * * 5411 * * * 726 * 1426 * * * * * * 39 0 * * * * * * 3809 0 0 P 40 * * * 5189 * * * * * * * * 40 * * * * * * * 40 0 * * * * * * 3809 0 0 N 41 3603 * 4347 946 * 5576 * * * * * 3427 * * * 2085 * * * * 41 0 * * * * * * 3809 0 0 I 42 1442 6020 * * * * * 3407 * 2236 2843 * * 4392 * 4575 * 3627 * * 42 0 * * * * * * 3809 0 0 A 43 2746 * * 3502 * 5742 * 5891 2191 4577 * * * 2953 2995 3247 3235 * * * 43 0 * * * * * * 3809 0 0 K 44 3753 * 3779 3470 * 1786 * * 3374 * * 4642 3449 4300 5596 2529 * * * * 44 0 * * * * * * 3809 0 0 Q 45 * * 2531 3948 * * 5028 5596 1583 * 5474 3513 * 2282 * * 4460 5975 * * 45 0 * * * * * * 3809 0 0 L 46 * * * * * * * 1379 * 1363 5576 * * * * 5796 * 2413 * * 46 0 * * * * * * 3809 0 0 V 47 * * * 5541 1366 * * 4055 * 4165 4522 * * 2784 2939 * 2903 5515 * * 47 0 * * * * * * 3809 0 0 G 48 5891 * * * * 2932 * * 3679 3460 * 5474 4457 * 3121 2271 1953 4851 * * 48 0 * * * * * * 3809 0 0 Y 49 5277 * * * 5251 * * 3825 * 3441 5477 4629 * * 5836 5710 1524 4884 * 1716 49 0 * * * * * * 3809 0 0 A 50 2346 * * * 4608 4262 * 5833 * 2956 1512 * * 4933 * * 2698 * 5251 * 50 0 * * * * * * 3809 0 0 L 51 * * * * 4083 * * 1111 * 1580 4270 * * * * * * 5918 3734 * 51 0 * * * * * * 3809 0 0 L 52 * * * * * * * 1697 * 1073 3905 * * * * * * 2742 * * 52 0 * * * * * * 3809 0 0 G 53 4765 * * * * 166 * * * * * * * * * 3796 * * * * 53 0 * * * * * * 3809 0 0 F 54 2754 5975 * * 1737 * * 3959 * 2750 2995 * * 3364 * 4513 5918 4646 * * 54 0 * * * * * * 3809 0 0 A 55 394 * * * * 2065 * * * * * * * * * * * * * * 55 0 * * * * * * 3809 0 0 L 56 * * * * 1760 * * 2651 * 1424 5969 * * * * * * 2673 * * 56 0 * * * * * * 3809 0 0 T 57 2041 * * * * * * 3226 * 3574 4203 * * * * 2659 2305 2724 * * 57 0 * * * * * * 3809 0 0 E 58 * * * 0 * * * * * * * * * * * * * * * * 58 0 * * * * * * 3809 0 0 S 59 1406 * * * 3574 * * * * 5384 * * * * * 1524 2814 5331 * * 59 0 * * * * * * 3809 0 0 I 60 4233 5688 * * 5384 4932 * 2915 * 2083 3808 * * * * 3712 2373 2630 * * 60 0 * * * * * * 3809 0 0 A 61 1221 * * 6020 * 1614 * * * * * * 5710 * * 3193 3887 4933 * * 61 0 * * * * * * 3809 0 0 L 62 * * * * 4933 * * 612 * 1675 * * * * * * * * * * 62 0 * * * * * * 3809 0 0 F 63 * * * * 1961 * * 3339 * 4076 * * * * * * * 4825 * 863 63 0 * * * * * * 3809 0 0 S 64 1232 2778 5728 * * 2593 * * * * * * * * * 2263 * 4815 * * 64 0 * * * * * * 3809 0 0 L 65 * * * * 3039 * * 3780 * 500 * * 5788 * * * 5339 4169 * * 65 0 * * * * * * 3798 0 0 L 66 * * * * 5320 * * 2684 * 2280 2293 * * * * * * 1289 * * 66 0 * * * * * * 3798 0 0 V 67 4907 * * * 5586 6007 * 1557 * 5468 2589 * * * * * 5043 1430 * * 67 0 * * * * * * 3798 0 0 V 68 644 * * * 5636 3913 * * * * * 5729 * * * 2102 * 5509 * * 68 0 * * * * * * 3798 0 0 F 69 3780 * * * 1406 4809 * 3631 * 1350 4603 * * * * * * * * * 69 0 * * * * * * 3798 0 0 L 70 5851 * * * * * * 1583 * 1320 3769 * * * * * * 2513 * * 70 0 * * * * * * 3798 0 0 I 71 4257 * * * * * * 1976 * 716 3954 * * * * * * 5636 * * 71 0 * * * * * * 3798 0 0 L 72 * * * * 4846 * * 2063 5623 668 4839 * * * * * * 4600 * * 72 0 * * * * * * 3713 0 0 F 73 * * * * 425 * * * * * * * * * * * * * * 1970 73 0 * * 0 * * * 3684 0 0 //