HHsearch 1.5 NAME c6dzkr_ FAM FILE c6dzkr_ COM /bmm/www/servers/phyre2/HH/hhmake -i c6dzkr_.a3m DATE Sat Sep 22 08:35:59 2018 LENG 84 match states, 84 columns in multiple alignment FILT 101 out of 243 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.8 EVD 0.4824 2.5323 SEQ >ss_dssp CCCSSCCCSSSSCSCCCSSCCCHHHHSSCSCCCTTCHHHHGGGBCTTSCBCCTTTSCCCHHHHHHHHHHHHHHHHTTSSCCSCC >sa_dssp EDDEEEDEEDEECEDECEEEDCDBEDEDDEEBDEECCECAEEBBCEEBEDDDEEEBCBDDECBEDACEBAEDACEEEEBEEEEE >ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHCCCCCEECCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCC >ss_conf 987621224545554668999820105883354558899998258998494614418799999999999999997046676797 >Consensus mxaxkkxRxrxxxxxxxxxxxxpxxxxxxxxidyknxxlLxxFisxxGkIxprrxTGlxxkxQrxixkaIkrARxxgLlPfxxp >c6dzkr_ MMAVKKSRKRTAATELKKPRRNQLEALGVTTIDYKDVAVLRTFLSERGKIRSRHVTGLTPQQQRQVATAIKNAREMALLPMAGP >UniRef50_B3DUR7(11-82:83) Ribosomal protein S18 n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DUR7_METI4 E=2e-06 s/c=0.74 id=32% cov=87% ----KKRKKRFLSPPKTVKKRVDIDA---EAIDFRNVELLKRYVTENGRILPRRITGLPAKLHRLLSKEIKKARNVLLM----- >UniRef50_C4XZP0(104-183:198) Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4XZP0_CLAL4 E=7e-16 s/c=1.06 id=31% cov=95% MEAKWEKRRRDPARNYRNGENDVFVRTGIDPLDlYSMPEILSRFVSSTGQILPREVTGCNAKNQKKLGIAIKRARSVGLL----- >UniRef50_C3KJB0(107-188:246) 28S ribosomal protein S18b, mitochondrial n=1 Tax=Anoplopoma fimbria RepID=C3KJB0_ANOFI E=8e-19 s/c=1.16 id=25% cov=96% ----QKTRKTCIRGDKICGNPCPVCRDPNVIIHHQNVKLLQQFISPhTGMVYDPTRTGVCMKQQKKLHEAINTARDQGFLPFQIP >UniRef50_Q872A7(157-216:256) Predicted protein n=2 Tax=Sordariaceae RepID=Q872A7_NEUCR E=2e-08 s/c=1.01 id=28% cov=68% ------------------------DELGFSPLDnYRNFSLISDYITPFGRIRHSKETGLKPVNQRKIAKMVRRAIGLGIHP---- >UniRef50_Q23K82(459-524:742) Putative uncharacterized protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q23K82_TETTH E=6e-09 s/c=0.94 id=26% cov=77% -------------------RKQSIRKINYFDIHWRNTELITQFVNNSGCIKNKIQNRLTRPQQKKIARTIRLSREMLLMPFRG- >UniRef50_UPI00005219CD(54-127:193) PREDICTED: similar to mitochondrial ribosomal protein S18A like n=1 Tax=Ciona intestinalis RepID=UPI00005219CD E=2e-05 s/c=0.68 id=31% cov=69% ----------------------PLRSRGIHITPY-DVLILNQFITSEGDILSQAETGLSRKEYFKVIACVKMAQRANMLP---- >UniRef50_A8NDC5(113-196:261) LP10852p, putative n=1 Tax=Brugia malayi RepID=A8NDC5_BRUMA E=1e-08 s/c=0.72 id=22% cov=75% ----------------------PICRDEYLFFDYRNPALILQFLfDQTDRILPLKKLGLCFDQYAQLRAQLLKAKEHGFIKFAVP # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * M 1 * * * * * * * * * * 0 * * * * * * * * * 1 0 * * * * * * 2440 0 0 M 2 2206 * * 1943 * * * * * * 2013 * * * * * * * * 1860 2 0 * * * * * * 2440 0 0 A 3 202 * * * * * * * * * * * * * * * * * * 2939 3 0 * * * * * * 3059 0 0 V 4 * * 3289 * * * * * 3093 * 2441 * 2773 * * 2975 3094 2281 * * 4 0 * * * * * * 3336 0 0 K 5 * * * 3871 * * * * 1263 * * * 3840 3126 1853 * * * 4214 * 5 0 * * * * * * 4283 0 0 K 6 * * * 2695 * 4273 * * 908 * * * * 3244 2686 * * * * * 6 0 * * * * * * 4425 0 0 S 7 * * * 4422 * 3546 * * 2960 * * * 2948 * 4617 2121 1892 * 3844 * 7 0 * * * * * * 4513 0 0 R 8 * * * * * * * * 3480 * * * * * 220 * * 4267 * * 8 0 * * * * * * 4513 0 0 K 9 4869 * * 3486 * 2707 * * 1236 4335 * * 4651 4187 2695 * * * * * 9 0 * * * * * * 4611 0 0 R 10 * * * * * 4780 * * 3477 * * 4697 * 3740 644 * 3055 * * * 10 188 4599 3629 0 * * * 4728 1000 0 T 11 * 2485 4706 * 3726 3629 * 3490 3030 * * 4379 4861 5021 3695 3805 3789 4424 * 4864 11 45 * 5021 * * 0 * 4632 0 1523 A 12 2927 * * 4779 * * * 2631 3854 3994 * 4508 2240 3183 4588 4611 4493 4439 * * 12 60 * 4611 * * * 0 4732 0 1000 A 13 1489 * * * * 4385 * * 2834 4481 * * * 4561 2995 3105 2977 * * * 13 178 3510 5137 1787 494 * 0 4665 1659 1178 T 14 3808 4960 3325 * * 2008 * * 2764 4929 * 5044 3544 * 4132 4570 3114 4742 * * 14 0 * * * * 1193 830 4848 0 1662 E 15 3838 * 5043 1853 * 4906 * 4922 2869 4994 * 3398 5267 4893 3127 4368 4969 * * 4680 15 0 * * * * * 0 4845 0 1178 L 16 * * * 5323 2726 5028 * 4147 2337 2393 2860 * 5409 * * * 5084 2965 * 5072 16 0 * * * * * 0 4845 0 1178 K 17 * 5465 * 5347 * * * 4324 1760 4542 * 5433 5177 * 1664 3689 4485 3715 * * 17 31 5556 * 1000 1000 1000 1000 4993 1000 1178 K 18 5743 4326 * 5101 * * 5371 * 2106 * * 3917 3582 3918 2674 3318 2688 5814 * * 18 29 5676 * 2585 263 0 * 4995 1000 1000 P 19 * * 5483 * * 2925 * * 3132 * * 5289 1159 4325 4422 3752 4563 4464 * * 19 69 5374 5483 2000 415 * * 4995 1000 0 R 20 * 4765 4505 5807 * * * 4183 2102 * 5532 2455 6146 * 1793 3229 * * * * 20 33 * 5467 * * * 0 4938 0 1000 R 21 * * * * 5693 * * 5925 2151 * * 4549 1561 4995 2042 5926 4560 5360 * * 21 84 4541 6220 320 2328 * 0 4996 1909 1606 N 22 5908 1637 2584 * 4248 * * 5561 3053 * * 3479 * 3831 3874 4053 * 6334 * * 22 77 5195 5348 3000 193 * 0 4991 1000 1983 Q 23 4114 4304 4416 5988 4533 5910 * 6200 4281 * 5783 5015 1126 5520 3805 4488 * 5002 6170 6167 23 30 5600 * 1000 1000 1880 457 5138 1000 2246 L 24 6167 6229 * 5443 2272 * * 2055 4162 2301 * 5121 * * 4979 4737 5637 3168 * 6168 24 0 * * * * 1506 626 5154 0 1983 E 25 5175 1603 3023 4542 5903 6132 * 4434 4445 5153 5673 5088 6341 6243 3906 4397 3422 4511 * * 25 43 6357 5861 3000 193 921 1084 5192 1000 1520 A 26 2358 6020 4437 4304 6311 * * 4064 2793 4191 * * 5500 4628 2004 4404 5444 5043 * 6780 26 32 * 5523 * * * 0 5167 0 1483 L 27 5366 5335 2212 3479 5168 5494 6126 3732 4239 2338 5811 4244 * 5244 5188 5842 3691 5534 * 6122 27 11 * 7040 * * 1954 431 5156 0 2266 G 28 6180 6493 6143 2897 * 1911 4865 5895 3418 5272 * 2962 3242 6088 5838 4253 6138 4513 * 6192 28 0 * * * * * 0 5142 0 2037 V 29 5341 6039 5390 5547 6087 5918 * 2174 3443 2902 6021 4096 * 5985 6212 * 4852 2308 * 3370 29 0 * * * * 401 2042 5104 0 2037 T 30 5107 * 2823 1945 5740 6113 5261 3874 4192 2823 * 3698 * * 4918 4550 4158 4732 * * 30 84 * 4144 * * * 0 5087 0 1000 T 31 4908 * 3836 4308 3514 4591 * 3743 3433 6089 5056 6196 2749 4726 5085 6488 3531 3811 6712 3364 31 73 4829 6122 1587 584 390 2079 4870 2005 2240 I 32 5340 * * * 4091 * * 1369 * 1858 5911 * * * * * 4657 2341 * * 32 0 * * * * 851 1167 4875 0 1568 D 33 * * 641 5423 * * 3351 * 4951 * * 3811 5705 * 6191 3897 4888 * * * 33 122 3627 * 0 * 0 * 4893 2102 1000 Y 34 * * * * 3129 * 3390 * * 6692 * * 6092 * * 6148 * * 3564 583 34 56 5644 5781 0 * * * 4955 1494 0 K 35 6392 * 5328 6534 * * 5354 * 752 4879 * 5521 * 4667 2660 6530 3834 * * * 35 0 * * * * 0 * 4928 0 1000 D 36 * * 1464 * * * 4685 * * * 5755 921 * 6064 5947 6503 6681 * * * 36 0 * * * * * * 5022 0 0 V 37 4392 * 6991 5387 3823 * * 3207 7172 3511 * * 3259 * 5366 5458 3139 1433 * 6407 37 0 * * * * * * 5022 0 0 A 38 3415 * 3935 2789 * 7194 4103 6107 3570 3643 5912 4803 4518 4432 2810 2712 * 6068 * * 38 0 * * * * * * 5022 0 0 V 39 6429 * * 6877 2878 * * 2725 5135 1029 7347 6224 * * 6542 4240 4849 4152 * * 39 0 * * * * * * 5022 0 0 L 40 6392 * * * * * * 2664 * 353 5338 * 5451 * * * * * * * 40 0 * * * * * * 5022 0 0 R 41 5104 * * 3639 * 5602 3895 * 2600 4535 6996 4717 * 3749 3005 2041 4209 4607 * 6392 41 0 * * * * * * 5022 0 0 T 42 6066 * 6642 3436 * 6890 3166 6165 3102 6064 * 4268 * 1671 2386 4393 7361 * * 7241 42 16 6461 * 0 * * * 5022 1000 0 F 43 * * * * 468 6109 * * * 4379 * 6536 * * * 4529 * * * 2640 43 0 * * * * * * 5022 0 0 L 44 6224 * * * * * * 1601 * 2250 3513 * 5451 6409 * 6066 4623 1894 * * 44 31 5561 * 0 * * * 5022 1000 0 S 45 6642 4583 4050 * * 5285 * 6681 6397 * 6513 2724 * * 4245 1493 1887 * * * 45 27 5734 * 0 * * * 5022 1474 0 E 46 6109 * 2393 2359 7036 6783 6411 * 3881 * 6877 5501 1973 4123 5983 3322 5120 * * 5914 46 197 2970 * 0 * * * 5022 2855 0 R 47 4389 * 3755 3817 * 6155 4106 5931 5459 6976 4664 3986 * 3803 2694 3305 2250 6523 * 4752 47 14 6672 * 0 * * * 5022 1000 0 G 48 3917 * 5561 * * 213 * * 6534 * * * * * * 5135 * * * 6546 48 42 5135 * 0 * * * 5022 1374 0 K 49 * 5570 4704 3935 * 4673 6565 4804 1278 4781 4959 6221 * 3702 2330 * 5667 * * * 49 0 * * * * * * 5022 0 0 I 50 * * * * * * * 329 * 4275 4423 * * * * * * 3243 * * 50 0 * * * * * * 5022 0 0 R 51 * * * 6542 4658 * * 3779 3315 1364 3968 5032 6590 5873 4502 5353 6041 5086 * 2712 51 0 * * * * * * 5022 0 0 S 52 6193 * 4518 7416 * 4310 3572 * 5780 * * 4204 957 5883 * 2427 6397 * * * 52 0 * * * * * * 5022 0 0 R 53 4388 * * * * * 6783 * 3776 5561 * 5623 4873 4824 742 3102 4837 * * 6672 53 0 * * * * * * 5022 0 0 H 54 4581 * 5818 6578 7416 6193 3243 6486 3353 5623 * 5719 6411 4902 1046 4006 5144 5435 * 6221 54 0 * * * * * * 5022 0 0 V 55 5068 * 5195 4444 4818 * * 1972 3442 3853 4321 * * 3930 3369 5380 4453 2791 * 5734 55 0 * * * * * * 5022 0 0 T 56 * * * * * * 5915 5886 * 5075 * 3511 * * * 3322 417 * * * 56 0 * * * * * * 5020 0 0 G 57 * * * 6535 6249 441 5105 * 4941 * 6523 5456 * * 2983 5829 * * * * 57 0 * * * * * * 5020 0 0 L 58 4273 5782 * * 6596 * * 4049 * 1187 6668 3613 * * * 4944 3046 2516 * * 58 0 * * * * * * 5020 0 0 T 59 6534 1235 7005 6984 * 6142 * * 7379 * * 4600 5115 * 3728 2262 2519 * * * 59 0 * * * * * * 5020 0 0 P 60 1741 6561 6038 6534 5580 6215 5808 5180 3456 4330 4467 4904 4402 4792 2489 4423 5827 6460 5168 * 60 0 * * * * * * 5020 0 0 Q 61 6460 * 4715 5192 4606 5975 6132 * 1056 5718 6427 * 5561 3901 2628 * 6522 3894 * 6322 61 0 * * * * * * 5020 0 0 Q 62 5928 * 6142 4796 5810 * 2585 6984 3319 6460 5063 3178 * 1489 * 4139 7160 5019 * 4712 62 0 * * * * * * 5020 0 0 Q 63 * * * 6058 * * 2430 * 6038 * * * * 451 * * * * * 4251 63 0 * * * * * * 5020 0 0 R 64 4825 * * 6543 5243 * 5815 5378 1910 5727 6412 5946 * * 898 6048 * 5552 * * 64 0 * * * * * * 5020 0 0 Q 65 4059 6322 5106 5812 7036 * 4491 5449 1458 3578 4916 * * 2678 3144 5370 * 5902 * 6108 65 0 * * * * * * 5020 0 0 V 66 6065 * * * * * * 1831 * 1327 3723 * * * * * * 2122 * * 66 0 * * * * * * 5020 0 0 A 67 2119 6216 * 3613 4107 4647 6364 4913 4703 4968 5241 6264 * 6058 4707 2551 2831 4131 * * 67 0 * * * * * * 5020 0 0 T 68 4137 * * 4157 * * 5433 5613 1286 4572 5364 3908 * 4483 2928 5774 3938 4612 * * 68 0 * * * * * * 5020 0 0 A 69 778 4450 * 3237 * * 6065 * * 3851 5379 * * 4954 * 3988 4480 5902 * * 69 0 * * * * * * 5020 0 0 I 70 5452 * * * 5622 * * 536 * 4530 * * * * * * * 2160 * * 70 0 * * * * * * 5020 0 0 K 71 6038 5284 * 3660 * * 6559 6657 884 5108 6770 6364 * 5019 2639 5622 4701 * * 5863 71 0 * * * * * * 5020 0 0 N 72 * * * 4597 * * * 5001 2484 5466 3530 5189 * 4099 1194 * 3628 5243 6731 * 72 0 * * * * * * 5020 0 0 A 73 224 5159 6509 * * * * * * * 6530 * * * * 3633 * 6216 * * 73 0 * * * * * * 5020 0 0 R 74 * * * * * * 6322 5709 3066 * * * * 3286 487 * 5891 5943 * * 74 0 * * * * * * 5016 0 0 E 75 4271 5383 3255 3624 3539 4589 3643 3614 4992 5135 5201 4008 * 3817 3658 3902 7138 6064 * 4044 75 0 * * * * * * 5016 0 0 M 76 3168 6346 * 7284 4307 * 4548 3679 6166 1749 2003 * * 5412 * 4628 6961 4650 * 5261 76 0 * * * * * * 5008 0 0 A 77 1718 * * * * 850 6051 * 6486 4809 6678 5323 * * 6475 4897 * * * * 77 0 * * * * * * 4987 0 0 L 78 * * * * 3348 * * 3125 * 594 6006 * * * * 6621 * 4279 * 4400 78 0 * * * * * * 4987 0 0 L 79 * * * * 4790 * 6548 3229 * 914 2242 * * * * 5399 * 4258 * 5139 79 0 * * * * * * 4949 0 0 P 80 * * * * * * * * 4940 * * * 102 * * 4802 * * * * 80 0 * * * * * * 4690 0 0 M 81 4862 * * * 709 * 5496 * * * 5644 4145 * * 5078 * * 5263 * 2327 81 0 * * * * * * 4277 0 0 A 82 2974 * * * * * 3663 5040 * 4705 4846 * * 4896 4186 3223 2693 1721 * 4765 82 0 * * * * * * 4236 0 0 G 83 4045 * * * * 1455 * 4438 * 4132 * * * * 4307 4509 * 1408 * * 83 0 * * * * * * 4032 0 0 P 84 * * * * * * * * * * * * 0 * * * * * * * 84 0 * * 0 * * * 3409 0 0 //