HHsearch 1.5 NAME c6c6kD_ FAM FILE c6c6kD_ COM /bmm/www/servers/phyre2/HH/hhmake -i c6c6kD_.a3m DATE Sat Apr 7 08:15:13 2018 LENG 44 match states, 44 columns in multiple alignment FILT 2 out of 6 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 1.4 EVD 0.4525 1.9401 SEQ >ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTTCTTCHHHHHTC >sa_dssp EEDEDCACECDEEEDEEDBDEBCDDCDAEEDDECEECDAEECDE >ss_pred CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCC >ss_conf 90468779987476389999999999999952110003331249 >Consensus nywxlxgxxxkxngdxxxaxkcyexxlgxxlxxxxsgigsxfxs >c6c6kD_ NYWYLQGLIHKQNGDLLQAAKCYEKELGRLLRDAPSGIGSIFLS >UniRef50_UPI0000F2EA1C(433-474:516) PREDICTED: hypothetical protein, partial n=1 Tax=Monodelphis domestica RepID=UPI0000F2EA1C E=0.0002 s/c=1.12 id=51% cov=98% --WRLRGFLAKLNGDKELALKCYERALGSRLQHSASGIGSLFPS # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * N 1 * * * * * * * * * * * 0 * * * * * * * * 1 0 * * * * * * 1000 0 0 Y 2 * * * * * * * * * * * * * * * * * * * 0 2 0 * * * * * * 1000 0 0 W 3 * * * * * * * * * * * * * * * * * * 0 * 3 0 * * * * * * 1391 0 0 Y 4 * * * * * * * * * * * * * * 1000 * * * * 1000 4 0 * * * * * * 1391 0 0 L 5 * * * * * * * * * 0 * * * * * * * * * * 5 0 * * * * * * 1391 0 0 Q 6 * * * * * * * * * * * * * 1000 1000 * * * * * 6 0 * * * * * * 1391 0 0 G 7 * * * * * 0 * * * * * * * * * * * * * * 7 0 * * * * * * 1391 0 0 L 8 * * * * 1000 * * * * 1000 * * * * * * * * * * 8 0 * * * * * * 1391 0 0 I 9 * * * * * * * 1000 * 1000 * * * * * * * * * * 9 0 * * * * * * 1391 0 0 H 10 1000 * * * * * 1000 * * * * * * * * * * * * * 10 0 * * * * * * 1391 0 0 K 11 * * * * * * * * 0 * * * * * * * * * * * 11 0 * * * * * * 1391 0 0 Q 12 * * * * * * * * * 1000 * * * 1000 * * * * * * 12 0 * * * * * * 1391 0 0 N 13 * * * * * * * * * * * 0 * * * * * * * * 13 0 * * * * * * 1391 0 0 G 14 * * * * * 0 * * * * * * * * * * * * * * 14 0 * * * * * * 1391 0 0 D 15 * * 0 * * * * * * * * * * * * * * * * * 15 0 * * * * * * 1391 0 0 L 16 * * * * * * * * 1000 1000 * * * * * * * * * * 16 0 * * * * * * 1391 0 0 L 17 * * * 1000 * * * * * 1000 * * * * * * * * * * 17 0 * * * * * * 1391 0 0 Q 18 * * * * * * * * * 1000 * * * 1000 * * * * * * 18 0 * * * * * * 1391 0 0 A 19 0 * * * * * * * * * * * * * * * * * * * 19 0 * * * * * * 1391 0 0 A 20 1000 * * * * * * * * 1000 * * * * * * * * * * 20 0 * * * * * * 1391 0 0 K 21 * * * * * * * * 0 * * * * * * * * * * * 21 0 * * * * * * 1391 0 0 C 22 * 0 * * * * * * * * * * * * * * * * * * 22 0 * * * * * * 1391 0 0 Y 23 * * * * * * * * * * * * * * * * * * * 0 23 0 * * * * * * 1391 0 0 E 24 * * * 0 * * * * * * * * * * * * * * * * 24 0 * * * * * * 1391 0 0 K 25 * * * * * * * * 1000 * * * * * 1000 * * * * * 25 0 * * * * * * 1391 0 0 E 26 1000 * * 1000 * * * * * * * * * * * * * * * * 26 0 * * * * * * 1391 0 0 L 27 * * * * * * * * * 0 * * * * * * * * * * 27 0 * * * * * * 1391 0 0 G 28 * * * * * 0 * * * * * * * * * * * * * * 28 0 * * * * * * 1391 0 0 R 29 * * * * * * * * * * * * * * 1000 1000 * * * * 29 0 * * * * * * 1391 0 0 L 30 * * * * * * * * * 1000 * * * * 1000 * * * * * 30 0 * * * * * * 1391 0 0 L 31 * * * * * * * * * 0 * * * * * * * * * * 31 0 * * * * * * 1391 0 0 R 32 * * * * * * * * * * * * * 1000 1000 * * * * * 32 0 * * * * * * 1391 0 0 D 33 * * 1000 * * * 1000 * * * * * * * * * * * * * 33 0 * * * * * * 1391 0 0 A 34 1000 * * * * * * * * * * * * * * 1000 * * * * 34 0 * * * * * * 1391 0 0 P 35 1000 * * * * * * * * * * * 1000 * * * * * * * 35 0 * * * * * * 1391 0 0 S 36 * * * * * * * * * * * * * * * 0 * * * * 36 0 * * * * * * 1391 0 0 G 37 * * * * * 0 * * * * * * * * * * * * * * 37 0 * * * * * * 1391 0 0 I 38 * * * * * * * 0 * * * * * * * * * * * * 38 0 * * * * * * 1391 0 0 G 39 * * * * * 0 * * * * * * * * * * * * * * 39 0 * * * * * * 1391 0 0 S 40 * * * * * * * * * * * * * * * 0 * * * * 40 0 * * * * * * 1391 0 0 I 41 * * * * * * * 1000 * 1000 * * * * * * * * * * 41 0 * * * * * * 1391 0 0 F 42 * * * * 0 * * * * * * * * * * * * * * * 42 0 * * * * * * 1391 0 0 L 43 * * * * * * * * * 1000 * * 1000 * * * * * * * 43 0 * * * * * * 1391 0 0 S 44 * * * * * * * * * * * * * * * 0 * * * * 44 0 * * 0 * * * 1391 0 0 //