HHsearch 1.5 NAME c6c4vA_ FAM FILE c6c4vA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c6c4vA_.a3m DATE Sat Feb 3 08:18:52 2018 LENG 81 match states, 81 columns in multiple alignment FILT 13 out of 17 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.2 EVD 0.4504 2.1502 SEQ >ss_dssp CCCCCCCSHHHHHHHHHHHHHHSSCCCSSSSCCCCCCHHHHHHHHHHHHHHHTSCCCHHHHHTCSSHHHHHHHHHHHHHHC >sa_dssp EEECECECDAAECACDBACECCEEDBDAADDEBDECEEECADDABEDACEDBECEBDCECADEBDCACCAADDACDCDEEE >ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >ss_conf 988875222344555545554044444634557432589999999999864198524999863330999999999664129 >Consensus gxxVxPRDAaERltFatwAxvtGksaxGixnxLPxlxxexAxkiaxRLsERaxxeitxedVxxaetiExlaxxVRxxlexx >c6c4vA_ NVDVPPRDAAERVTFATWAIVTGKSPGGIFNELPRLDDEAAAKIAQRLSERAEGPITAEDVLTSSNIEALADKVRTYLEAG >UniRef50_Q0S9C4(1196-1504:1685) Polyketide synthase n=7 Tax=Corynebacterineae RepID=Q0S9C4_RHOSR E=2e-77 s/c=0.28 id=66% cov=101% GSDVPPRDAAERLTFATWAVVTGESAKGIFNTLPILNDETAEKLAVRLSERANGEITFDDVLDSTTIEELANVVRGFLEdSG >UniRef50_D0LBD1(1272-1583:1759) Beta-ketoacyl synthase n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0LBD1_GORB4 E=9e-64 s/c=0.25 id=55% cov=101% GSDVPPRDAAERLTFGVYAMVTKRSAGGIFNKLPVLEEEVAQQLTDRLNERAGGDIDLEDILDSETIEEMSDYVRQYLDAsA >UniRef50_C2AID0(1230-1523:1704) Mycolic acid condensase n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AID0_TSUPA E=1e-101 s/c=0.39 id=56% cov=101% GDGVPPRDAAERLTFATYAIVVGRSPGGVFNELDVLSEDVAEKLTARLSERAGGEVDIEDVIDSKNIEEMATYVGAVMnEAT >UniRef50_Q5Z3G0(1260-1557:1737) Putative polyketide synthase n=1 Tax=Nocardia farcinica RepID=Q5Z3G0_NOCFA E=1e-101 s/c=0.42 id=62% cov=101% AVdedDVPPRDAAERLTYATWAIVTGKSAGGIFNTLPILEEEVAEKLAARLSERIKAEVTVDDVLDCETIEQLADIVRERQDSG >UniRef50_C8NJI7(1174-1470:1654) Polyketide synthase n=7 Tax=Corynebacterium RepID=C8NJI7_COREF E=1e-97 s/c=0.42 id=49% cov=100% GVGVAPRDASERMVFGTWASLTGKAAAGITSELPEIDVDTATRIAERLTERSGVEITTEQVLAAETLEPLSDMVREGLET- >UniRef50_Q4JY17(1242-1499:1687) Polyketide synthase n=2 Tax=Corynebacterium jeikeium RepID=Q4JY17_CORJK E=3e-91 s/c=0.41 id=49% cov=100% GGGVAPRDASERLVFATWAKVTGKAAQGVTSQLPGIDEEQARGIADRLTERSGAEVSAEDVLAAETLEPLSEKVRSSLES- >UniRef50_B1VED1(1219-1467:1663) Polyketide synthase n=2 Tax=Corynebacterium RepID=B1VED1_CORU7 E=2e-89 s/c=0.39 id=48% cov=99% --GVAPRDASERLVFATWAKINGKAAAGVTSPLPEITAETAQQIAERLSERSGAEVTAEQVSEATDLAALADTVRASLETA >UniRef50_C0XNS2(1166-1410:1592) Polyketide synthase n=5 Tax=Corynebacterium RepID=C0XNS2_9CORY E=5e-77 s/c=0.39 id=44% cov=100% GVGVAPRDASERMVFGAWAKYAGAAAAGVTSPLPTIDDTVAAEIAAHLSERSGIEVTAAEVSAAEALETLANKVREGLET- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * N 1 3496 * * * * 381 * * * * * 2799 * * * * * * * * 1 0 * * * * * * 2158 0 0 V 2 3722 * 3287 * * 3551 * * * * * * * * * 1981 * 1050 * * 2 134 3496 * 1585 585 * * 2158 1000 0 D 3 * * 1116 * * 893 * * * * * * * * * * * * * * 3 0 * * * * * * 2179 0 0 V 4 * * * * * * * * * * * * * * * * * 0 * * 4 0 * * * * * * 2179 0 0 P 5 1177 * * * * * * * * * * * 842 * * * * * * * 5 0 * * * * * * 2179 0 0 P 6 * * * * * * * * * * * * 0 * * * * * * * 6 0 * * * * * * 2179 0 0 R 7 * * * * * * * * * * * * * * 0 * * * * * 7 0 * * * * * * 2179 0 0 D 8 * * 0 * * * * * * * * * * * * * * * * * 8 0 * * * * * * 2179 0 0 A 9 0 * * * * * * * * * * * * * * * * * * * 9 0 * * * * * * 2179 0 0 A 10 842 * * * * * * * * * * * * * * 1177 * * * * 10 0 * * * * * * 2179 0 0 E 11 * * * 0 * * * * * * * * * * * * * * * * 11 0 * * * * * * 2179 0 0 R 12 * * * * * * * * * * * * * * 0 * * * * * 12 0 * * * * * * 2179 0 0 V 13 * * * * * * * * * 812 2152 * * * * * * 2284 * * 13 0 * * * * * * 2179 0 0 T 14 * * * * * * * * * * * * * * * * 842 1177 * * 14 0 * * * * * * 2179 0 0 F 15 * * * * 127 * * * * * * * * * * * * * * 3566 15 0 * * * * * * 2179 0 0 A 16 565 * * * * 1625 * * * * * * * * * * * * * * 16 0 * * * * * * 2179 0 0 T 17 3566 * * * * * * * * * * * * * * * 293 3332 * * 17 0 * * * * * * 2179 0 0 W 18 * * * * * * * * * * * * * * * * * * 314 2353 18 0 * * * * * * 2179 0 0 A 19 0 * * * * * * * * * * * * * * * * * * * 19 0 * * * * * * 2179 0 0 I 20 * * * * * 3932 * 1373 2083 * 3332 * * * * 3853 3809 3789 * * 20 0 * * * * * * 2179 0 0 V 21 * * * * 3809 * * 3755 * 3853 3932 * * * * * * 654 * 3566 21 0 * * * * * * 2179 0 0 T 22 3566 * * * * * * * * * * 3755 * * * * 425 3374 * * 22 0 * * * * * * 2179 0 0 G 23 * * * * * 151 * * 3332 * * * * * * * * * * * 23 0 * * * * * * 2179 0 0 K 24 2737 * * 3789 * * * * 781 * * * * * 2353 * * * * * 24 0 * * * * * * 2179 0 0 S 25 1177 * * * * * * * * * * * * * * 842 * * * * 25 0 * * * * * * 2179 0 0 P 26 386 * * * * * * * * * * * 2092 * * * * * * * 26 0 * * * * * * 2179 0 0 G 27 1456 * * * * 1042 * * 3789 * * * * 3688 * * * * * * 27 0 * * * * * * 2179 0 0 G 28 * * * * * 0 * * * * * * * * * * * * * * 28 0 * * * * * * 2179 0 0 I 29 * * * * * * * 914 * * * * * * * * * 1091 * * 29 0 * * * * * * 2179 0 0 F 30 * * * * 842 * * * * * * * * * * * 1177 * * * 30 0 * * * * * * 2179 0 0 N 31 * * * * * * * * * * * 842 * * * 1177 * * * * 31 0 * * * * * * 2179 0 0 E 32 3809 * * 1719 * * * * 3332 * * * 2148 3688 * * 2169 * * * 32 0 * * * * * * 2179 0 0 L 33 * * * * * * * * * 0 * * * * * * * * * * 33 0 * * * * * * 2179 0 0 P 34 * * 3374 * * * * * * * * * 146 * * * * * * * 34 0 * * * * * * 2179 0 0 R 35 * * * 1836 * 3688 * 2673 2852 * * * * * 3904 * 3566 2353 * * 35 0 * * * * * * 2179 0 0 L 36 * * * * * * * 1431 * 1040 * * * * * * * 2809 * * 36 0 * * * * * * 2179 0 0 D 37 * * 994 2444 * * * * * * * 3789 * * * 2575 3755 * * * 37 0 * * * * * * 2179 0 0 D 38 2824 * 1449 1240 * * * * * * * * * * * * * 3853 * * 38 0 * * * * * * 2179 0 0 E 39 3808 * 2103 710 * * * * * * * * * * * * 3566 * * * 39 0 * * * * * * 2179 0 0 A 40 3904 * * * * * * * * * * * * 3688 * * 1253 1198 * * 40 0 * * * * * * 2179 0 0 A 41 0 * * * * * * * * * * * * * * * * * * * 41 0 * * * * * * 2179 0 0 A 42 1787 * * 1981 * * * * * * * * * 2528 3688 * 2279 * * * 42 0 * * * * * * 2179 0 0 K 43 * * * 3566 * 3688 * * 932 * * * * 2031 3853 * * * * * 43 0 * * * * * * 2179 0 0 I 44 * * * * * * * 974 * 1504 2852 * * * * * * * * * 44 0 * * * * * * 2179 0 0 A 45 314 * * * * * * * * * * * * * * * 2353 * * * 45 0 * * * * * * 2179 0 0 Q 46 1914 * 2499 1508 * * * * * * * * * 2900 * * * 3789 * * 46 0 * * * * * * 2179 0 0 R 47 * * * * * * 3566 * * * * * * * 127 * * * * * 47 0 * * * * * * 2179 0 0 L 48 * * * * * * * * * 0 * * * * * * * * * * 48 0 * * * * * * 2179 0 0 S 49 * * * * * * * * * * * 3332 * * * 710 1788 * * * 49 0 * * * * * * 2179 0 0 E 50 * * * 0 * * * * * * * * * * * * * * * * 50 0 * * * * * * 2179 0 0 R 51 * * * * * * * * * * * * * * 0 * * * * * 51 0 * * * * * * 2179 0 0 A 52 712 * * * * * * 3566 * * * * * * * 1712 * * * * 52 0 * * * * * * 2179 0 0 E 53 * * 3897 2855 * 805 * * 3566 * * 2859 * * * * * * * * 53 0 * * * * * * 2179 0 0 G 54 2083 * * * * 1079 * 2682 * * * * * * * * * 2892 * * 54 0 * * * * * * 2179 0 0 P 55 * * 3332 524 * * * * * * * * 2900 * * * 3808 * * * 55 0 * * * * * * 2179 0 0 I 56 * * * * * * * 967 * * * * * * * * * 1034 * * 56 0 * * * * * * 2179 0 0 T 57 * * 2353 * * * * * * * * * * * * 3688 461 * * * 57 0 * * * * * * 2179 0 0 A 58 968 * * * 3789 * * 3374 * 3332 * * * * * * 3853 2722 * * 58 0 * * * * * * 2179 0 0 E 59 3566 * 1767 861 * * * * * * * * * 3809 * * * * * * 59 0 * * * * * * 2179 0 0 D 60 * * 654 2737 * * * * * * * * * 2220 * * * * * * 60 0 * * * * * * 2179 0 0 V 61 * * * * * * * 3332 * * * * * * * * * 151 * * 61 0 * * * * * * 2179 0 0 L 62 * * * * * * 3809 3374 3808 1090 * * * 3897 3932 2658 * * * * 62 0 * * * * * * 2179 0 0 T 63 1442 * 1504 2782 * * * * * * * * * * * * 2900 * * * 63 0 * * * * * * 2179 0 0 S 64 784 3566 * * * * * * * * * * * * * 1578 * * * * 64 0 * * * * * * 2179 0 0 S 65 * * * 853 * * * * 3374 * * * * * 3932 3904 2199 * * * 65 0 * * * * * * 2179 0 0 N 66 2682 * 3755 * * * * * * * * 2615 * * * * 720 * * * 66 0 * * * * * * 2179 0 0 I 67 * * * * * * * 842 * 1177 * * * * * * * * * * 67 0 * * * * * * 2179 0 0 E 68 3755 * * 111 * * * * * * * * * * * * * * * * 68 0 * * * * * * 2179 0 0 A 69 2265 * 3808 1899 * * * * * * * * 2236 3566 * * 2682 * * * 69 0 * * * * * * 2179 0 0 L 70 * * * * * * * * * 314 2353 * * * * * * * * * 70 0 * * * * * * 2179 0 0 A 71 408 * * * * * * * * * * * * * * 2023 * * * * 71 0 * * * * * * 2179 0 0 D 72 * * 1104 2789 * * * * * * * 2169 * * * * 2575 * * * 72 0 * * * * * * 2179 0 0 K 73 * * * * * * 3932 3566 2128 3809 3853 * * * 3897 * 2781 3789 * 2353 73 0 * * * * * * 2179 0 0 V 74 * * * * * * * * * * * * * * * * * 0 * * 74 0 * * * * * * 2179 0 0 R 75 * * * * * 3374 * * * * * * * * 146 * * * * * 75 0 * * * * * * 2179 0 0 T 76 2552 * * 1164 * 3789 * * * * * * * 3332 * 3688 2900 * * * 76 0 * * * * * * 2179 0 0 Y 77 * * * * 3789 1783 3808 * * * * * * * 3566 2721 * 3374 * 2100 77 0 * * * * * * 2179 0 0 L 78 * * * * * * * * * 288 3374 * * 3566 * * * * * * 78 146 3374 * 0 * * * 2179 1000 0 E 79 * * 2444 293 * * * * * * * * * * * * * * * * 79 108 3789 * 0 * * * 2179 1000 0 A 80 1318 * * * * * * * * * * * * * * 2093 1456 * * * 80 247 2670 * 0 * * * 2179 1000 0 G 81 1601 * * * * 901 * * * * * * * * * * 2891 * * * 81 0 * * 0 * * * 1954 0 0 //