HHsearch 1.5 NAME c6a2uA_ FAM FILE c6a2uA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c6a2uA_.a3m DATE Sat Jun 22 08:26:22 2019 LENG 114 match states, 114 columns in multiple alignment FILT 41 out of 45 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 4.6 EVD 0.4395 0.7898 SEQ >ss_dssp CCHHHHHHHHHHHHHCCSSCCHHHHHHHHHHHHTTSCCSSSHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHCEETTEESCSTTCHHHHTTTTTCCCTTC CCSSCCCTTSCCCC >sa_dssp EDDCDCABEBADECBEDEECDDECADDABDCBDEECBEEEDBBDEACDCCEEEECDEECEDCBECACEABCDADBEEEECCDDEACDCEDDEECEDCEED EDEEEEDEEEEEEE >ss_pred CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCEECCCC CCCCCCCCCCCCCC >ss_conf 9837889999999838566898999999999851263317789999998403689967999999999856101007855212355655564695022354 48999977678799 >Consensus txxxxxFlxvSxxLTgrxxLdxxxgxrlxxaLxxxxxxfxxxlxxLxxxlxxxxxxxxxxxxaxxIixaWYxGvVgxxvvaYxxALMyxxtxDxlxiPTY cxxxPxyWtxxPpe >c6a2uA_ TAPLDTFMTLSESLTGKKGLSRVIGERLLQALQKGSFKTADSLPQLAGALASGSLTPEQESLALTILEAWYLGIVDNVVITYEEALMFGVVSDTLVIRSY CPNKPGFWADKPIE >UniRef50_B2ILE1(62-189:209) Sorbitol dehydrogenase small subunit n=2 Tax=Alphaproteobacteria RepID=B2ILE1_BEII9 E=4e-31 s/c=1.05 id=30% cov=101% TSPdVARFMDISHSLTDRSKLDPRIGAALYAGIVNSAPERKAQLTKLHALMNTGRLTtsadlaktaekvdPALKDVIHDIMTGWYRGVADGKVVVYRSAL MFDITKDAIYPKTYAAGGPFYWTTQPPE >UniRef50_C8Q2Q3(50-174:178) Putative dehydrogenase subunit n=1 Tax=Pantoea sp. At-9b RepID=C8Q2Q3_9ENTR E=5e-27 s/c=0.98 id=32% cov=97% ---FTAFMTVSEVICGYPKLDNALGQRIFTLMQSRNAELKNQLATLNKILnadmrsvdmqkALQGVDQNTQTLFTDILRAWQLGIVGsgkeAKVVAYEYA LMYTPIADVVVLPTYARGEPHYWAKPPV- >UniRef50_A8GE95(44-168:172) Putative uncharacterized protein n=1 Tax=Serratia proteamaculans 568 RepID=A8GE95_SERP5 E=8e-27 s/c=0.97 id=33% cov=96% ---VDAFLKLARLLTNRPTLEPAFSAAMYSALVSHTEQFNHRLNTLEKALSISGAQdvqsfisalpseDENRKLALLIIESFYTGNVGrgrqAVVVSYEK ALMFQKTIDVTVIPTYIRAQPNYWVATP-- >UniRef50_A9E617(3-105:107) Ribonucleotide-diphosphate reductase alpha subunit n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9E617_9RHOB E=4e-17 s/c=0.86 id=33% cov=88% ---VEGFLALSQKTLRKEDLFEDVAAKMLKAF--ADIDRKDDLTALAEG-------AEDQALSNEIAAAWYSGVSpdpdDLEVLTYTDALMWQAMDYTKP M-AYCGGPMGYWADPP-- >UniRef50_A8GDK0(42-166:173) Twin-arginine translocation pathway signal n=1 Tax=Serratia proteamaculans 568 RepID=A8GDK0_SERP5 E=4e-15 s/c=0.66 id=30% cov=96% ----DNFLAISRLLTDIPLPDPHLALRLYVALQPLFPQLEQQVDTLATLMAQHTdlagedfhtliqRQPEpLAALYQSLISGWYLGVIGDPArpicIAFE NIVSYQRVRDALLPPSYCPGEPNFWTHPP-- >UniRef50_B9JQ08(57-183:195) Putative uncharacterized protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JQ08_AGRRK E=8e-31 s/c=1.06 id=33% cov=101% TRGLSGFLDVSHAITGKSDLSPMTADRIYAALQADDAGFEGRLAQIVPLVRQTGSPDALKAAAsaiglgdtlTAIITAWYTGTVetakGPVVVSYAEALM YRPVADGLTVPTYCNKGPLWWTGLPPE >UniRef50_C8QEJ0(44-167:167) Putative uncharacterized protein n=1 Tax=Pantoea sp. At-9b RepID=C8QEJ0_9ENTR E=7e-22 s/c=0.84 id=32% cov=96% ----ADFIQVSQWLTQQENLNSAVAHALLIALNQTQKDFTAGLTQLKTLLQSQPGllqqdhltfaasDAASEKLAKAILGGWYNGVVGKGIhalyVTYVN TLANQLVNDKLVPPSFSYGECGSWAQQP-- >UniRef50_C8QAV5(31-162:218) Putative uncharacterized protein n=1 Tax=Pantoea sp. At-9b RepID=C8QAV5_9ENTR E=1e-21 s/c=0.79 id=32% cov=91% ----------SELLTGRRGLDIGITERLWTLLCQQDSTFPAQLASLMTRLNAlhsedreqivAQLSDDEVKTALTIISPWYLGYTGHPsttkavddahFV TFLSALMYEPTKDHTIRPTYARAGGDYWAEVPP- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * T 1 * * * * * * * * * * * * * * * * 0 * * * 1 0 * * * * * * 2316 0 0 A 2 1698 * * * * * * * * * * * * * 2074 1138 * * * * 2 0 * * * * * * 2316 0 0 P 3 * * * * * 2414 * * * * * * 300 * * * * * * * 3 670 1428 * 582 1591 * * 2600 1610 0 L 4 * * * * 2291 * * 3327 * 995 * * * * * * * 2363 * * 4 0 * * * * * * 3827 0 0 D 5 2342 * 1850 2487 * * * * * * * 4089 * * 4434 2312 4617 * * * 5 0 * * * * * * 4390 0 0 T 6 2443 * 2140 * * 2726 * * * 5982 * 3608 * 4876 2346 * 3191 * * * 6 0 * * * * * * 4498 0 0 F 7 * * * * 0 * * * * * * * * * * * * * * * 7 0 * * * * * * 4673 0 0 M 8 4848 * * * 3093 * * 3158 * 1440 1578 * * * * * 4952 * * * 8 0 * * * * * * 4673 0 0 T 9 1695 * 3287 3607 * 4848 * * 3376 4489 * * * 2361 * 5058 3232 * * * 9 0 * * * * * * 4673 0 0 L 10 * * * * * * * 3019 * 1192 * * * * * * * 1187 * * 10 0 * * * * * * 4673 0 0 S 11 3884 * * * * * * * * * * * * * * 101 * * * * 11 0 * * * * * * 4712 0 0 E 12 3167 * * 3396 * * 3912 * * 5174 * * * 1912 1643 4117 4163 * * * 12 0 * * * * * * 4712 0 0 S 13 2689 5174 6417 * 2921 * * 5019 4126 2326 * * * * 2649 4622 3602 5049 4660 4885 13 0 * * * * * * 4712 0 0 L 14 4421 * * * * * * 2818 * 489 * * * * * * 4126 4584 * * 14 0 * * * * * * 4712 0 0 T 15 * 5049 * * * * * 4893 * 4126 4367 * * * * * 505 2994 * * 15 31 * 5548 * * * * 4712 0 0 G 16 * * 2379 3850 * 1026 * * * * * 3832 * 4639 3444 4474 * * * * 16 0 * * * * 0 * 4704 0 1000 K 17 * * * * * * 2105 4802 2182 * * * * 4660 1251 5548 * * * 5049 17 27 * 5765 * * * * 4712 0 0 K 18 5375 * 4236 2770 * * 4064 * 2840 * * * 3024 2957 3296 2634 4010 * * * 18 138 * 3453 * * 0 * 4716 0 1000 G 19 3588 * 1872 * * 2894 4895 * 3163 4680 * 3053 * 3653 * 4830 3479 * * * 19 0 * * * * 0 * 4604 0 1963 L 20 * 5620 * * 4090 * * 3872 * 457 * * 4802 * * * * 3503 * * 20 0 * * * * * * 4712 0 0 S 21 * * 1083 4883 4126 5620 4367 * * * * 2219 3957 * * 3490 * * * * 21 0 * * * * * * 4712 0 0 R 22 2502 * 4852 3509 * * * 5017 * 4421 * 5049 1245 4691 4078 3768 * * * * 22 0 * * * * * * 4712 0 0 V 23 2368 * 4126 4893 * 3845 4802 5019 * 3178 3894 3695 * 3415 3496 * * 2820 * * 23 0 * * * * * * 4712 0 0 I 24 * * * * 3379 * * 2128 * 1758 4691 * * 5019 * * 3894 2260 * 4885 24 0 * * * * * * 4712 0 0 G 25 1681 * * * * 1015 * * * * * * * * * 3353 4025 4885 * * 25 0 * * * * * * 4712 0 0 E 26 2078 * 4528 3604 * 4653 4660 * 3495 4802 * 5305 * 1912 4198 4421 4584 * * * 26 0 * * * * * * 4712 0 0 R 27 1991 * * * * * 5078 * 4126 * * * * * 744 4885 * 5034 * * 27 0 * * * * * * 4712 0 0 L 28 5305 * * * 4441 * * 2682 * 1118 2649 * * * * * * 3433 * 4057 28 0 * * * * * * 4712 0 0 L 29 4893 * * * 2854 * 4980 * * 1749 * * * * * * * 5384 5017 1171 29 0 * * * * * * 4712 0 0 Q 30 1904 * 2341 5620 * 5051 * 4660 4126 4421 * * 6417 3688 * 3455 2999 4802 * * 30 0 * * * * * * 4712 0 0 A 31 566 * * * * 4134 * * 5174 3385 * 5606 * * * * 3641 4519 * * 31 44 * 5044 * * * * 4712 0 0 L 32 * * * * 2515 * * 4496 * 571 3219 * * * * * * * * * 32 205 3823 4010 1000 1000 * 0 4679 2112 1000 Q 33 * 4923 3639 5210 * * 5272 4953 4723 3170 * 4595 * 2286 * 3511 3543 2103 * * 33 0 * * * * * 0 4572 0 1670 K 34 2757 * 4202 3794 * 5514 5466 * 2559 * * 5350 4750 3750 2191 2925 * 5335 * * 34 37 * 5299 * * 1810 485 4572 0 1670 G 35 3482 * 4389 4793 * 4014 3643 3899 5542 4746 * 4037 * 3073 2855 3034 3444 5208 * * 35 33 5483 * 1000 1000 1502 629 4659 1000 1927 S 36 3896 * 1192 4812 4156 5377 * 5405 5316 * * 2870 * 4644 5307 4792 3809 5560 * * 36 0 * * * * 1043 958 4671 0 1587 F 37 2157 * * 4867 2668 5583 5334 5201 4655 * * 5021 2363 4839 4868 2709 * * * 5362 37 36 5348 * 2000 415 * 0 4704 1000 1000 K 38 4181 * 2474 2703 * 3315 5251 * 3990 * * 4031 5399 2463 4355 3733 4996 * * * 38 0 * * * * * 0 4704 0 1000 T 39 * * 5033 * 990 * * 4872 * 2857 * 5399 * 5402 3335 5362 3654 * * 4514 39 68 5530 5362 0 * 0 * 4704 1000 1000 A 40 2740 * 4933 4157 * 5710 * 5028 2977 4835 * 4869 3033 5466 4016 2608 3323 5530 * 5417 40 33 5466 * 3700 115 * 0 4696 1000 1000 D 41 2293 * 2565 5291 * 4530 4869 5530 5009 5422 * 5031 * 2193 * 3414 3256 * * * 41 0 * * * * 0 * 4696 0 1000 S 42 3660 * 3591 4367 * 4660 * 5404 2670 * * 3162 * 2387 2233 4222 * * * * 42 0 * * * * * * 4712 0 0 L 43 5384 * * * * * * 2132 5044 1076 * * * * 5443 * 4026 2654 * * 43 0 * * * * * * 4712 0 0 P 44 2221 * 3413 5484 * 3936 * 4595 3948 5439 * 2863 3695 4155 4885 4297 3068 * * * 44 0 * * * * * * 4712 0 0 Q 45 1577 * 5044 4980 * * * * 5436 4500 * 4477 * 1902 3799 4287 3323 * * * 45 0 * * * * * * 4712 0 0 L 46 5443 * * * 5671 * * 4228 * 222 * * 5439 * * * * 5404 * * 46 124 3977 5740 2585 263 * * 4712 1678 0 A 47 2416 * 5473 4873 * * 2661 4168 3659 3171 4991 4038 * 3491 3635 4659 5028 5644 * * 47 82 5349 5028 3459 138 0 * 4720 1000 1000 G 48 2895 * 3582 3904 * 3858 * * 3949 * * 3882 3711 2701 * 4066 2660 3930 * * 48 45 5011 * 3807 107 0 * 4679 1000 1000 A 49 1821 * * * * 3514 * 3969 5034 1452 * * * 5671 3373 * 5404 * 5066 * 49 132 4051 5213 2910 206 * * 4712 1688 0 L 50 4878 * * * 3987 3879 * 3552 * 826 3604 * * * * * * 3768 * 5060 50 150 3341 * 3194 167 * 0 4700 2223 1000 A 51 1586 * 4074 3728 * * 4943 * 2818 * * 3604 5093 3393 4503 4110 4354 * * * 51 29 5658 * 1000 1000 * 0 4700 1000 1000 S 52 2916 * 5454 4460 * 6023 * 4873 4878 4471 * * 3520 2645 5165 2661 2891 3280 * * 52 45 5012 * 3322 152 * 0 4700 1000 1000 G 53 3081 * 3227 3308 * 2293 3387 * 3592 * * * 4641 2781 4268 4873 5656 * * * 53 30 5598 * 3585 126 * 0 4700 1000 1000 S 54 3853 * 3939 3619 * 2699 * * 3684 5658 5313 3754 3415 3075 5418 4846 2619 * * * 54 234 3262 4460 3546 129 * 0 4700 2140 1000 L 55 3428 * 6035 * 3496 3295 * 4913 5234 2151 * * 3471 * 4760 3389 4147 4011 3728 * 55 85 4129 * 3619 122 * 0 4580 1510 1071 T 56 3527 * 2008 3822 4740 * 5358 6270 3846 * * 5822 3447 3013 * 3579 3321 4937 * * 56 177 3115 * 3667 118 1000 1000 4580 2328 1071 P 57 2525 * 2883 * * 3907 * * 5695 * * 5592 1168 4066 * 4339 * 5065 * * 57 141 3825 5454 3427 141 0 * 4679 1971 1000 E 58 1574 * 3037 2255 * * * * 5576 4497 * 5034 4998 3682 4848 4031 4969 * * * 58 215 2855 * 2629 254 * 0 4704 2421 1000 Q 59 3710 * 3664 4532 5055 * * * * 1171 * 4856 * 2685 * 4646 4001 4848 * * 59 29 5639 * 3807 107 * 0 4704 1000 1000 E 60 2949 * * 3337 * * 3888 * 2700 * 5280 * 4563 2167 2447 5378 * 4995 5595 * 60 53 4788 * 2874 212 * 0 4704 1551 1000 S 61 1636 * 2185 5344 * * 4999 * 2875 * * 4969 4075 3223 * 5806 4326 * * * 61 22 6040 * 2807 222 0 * 4704 1000 1000 L 62 4223 * * * * * * 3350 5078 1279 * * * * * * 1462 4518 * * 62 0 * * * * * * 4712 0 0 A 63 979 * * * 5049 5404 * 3385 5376 3915 4584 * 4026 * * 3858 * 4482 * 4802 63 102 3870 * 3170 170 * * 4712 1749 0 L 64 * * * 5376 * 6099 3284 4421 3334 1969 * 4126 * 3696 2901 5051 2654 * * * 64 34 5404 * 2322 322 * * 4712 1000 0 T 65 1767 * 2706 3684 * * * * 3610 4883 * * * 2722 * 3725 2921 * * * 65 20 6162 * 1585 585 * * 4712 1000 0 I 66 * * * * * * * 155 * 3294 * * * * * * * * * * 66 35 5376 * 1585 585 * * 4712 1000 0 L 67 3504 * * * * * * 1353 * 1892 2940 * * * * * * 3052 * * 67 0 * * * * * * 4712 0 0 E 68 3024 * * 3298 4852 4660 3715 * * * * * * 4176 2882 1965 2491 * * * 68 0 * * * * * * 4712 0 0 A 69 691 * * * * 1663 * * * * * * 5017 * * 4883 * * * * 69 0 * * * * * * 4712 0 0 W 70 * * * * 3884 * * * * * * * * * * * * * 101 * 70 0 * * * * * * 4712 0 0 Y 71 * * * * * * * * * 5019 * * * 5049 * * * * * 91 71 0 * * * * * * 4712 0 0 L 72 * * * * * * * * * 1476 * 4660 * * 3061 3266 1584 4519 * * 72 0 * * * * * * 4712 0 0 G 73 * * * * * 0 * * * * * * * * * * * * * * 73 0 * * * * * * 4712 0 0 I 74 * * * * * * * 2450 * 4090 4980 4883 * * * 3182 2883 1355 * 4154 74 0 * * * * * * 4712 0 0 V 75 3859 * * * * * * 2682 * 4852 * * * * * 4126 5017 616 * * 75 277 2519 * 2000 415 * * 4712 2806 0 D 76 * * 2150 3266 * 751 * * * * * * * 4584 * 4852 * * * * 76 221 2814 * 2347 316 * * 4712 2603 0 N 77 2050 * 2213 5033 * 4507 2957 * 4646 4108 * 2750 5639 4357 * * 5385 * * * 77 635 1491 * 2000 415 * * 4713 3464 0 V 78 4462 * * 2462 * 3816 * 5013 2439 * 5033 * 3184 * 4071 * 3175 2507 * * 78 92 4011 * 2811 222 * * 4713 1628 0 V 79 4784 5013 * * 4134 * * 4646 * 2628 3314 * * * * * 4843 893 * * 79 164 3220 * 2000 415 * * 4713 2082 0 I 80 * * * * 3325 * * 2050 * 4108 * * * * * * * 853 * 4406 80 0 * * * * * * 4713 0 0 T 81 1198 * * * * 3924 * * * * * * * * * 2610 2227 3050 * * 81 0 * * * * * * 4713 0 0 Y 82 * * * * 2749 * * * * * * * * * * * * * * 232 82 0 * * * * * * 4713 0 0 E 83 3493 * * 1248 * * * 5013 3855 4990 * * 4972 * 2617 3927 4108 4646 * * 83 0 * * * * * * 4713 0 0 E 84 4357 * 2211 2842 * 5294 * * 2829 4635 * 3040 * 4843 * 3274 3337 * * 5037 84 0 * * * * * * 4713 0 0 A 85 114 * * * * * * 4784 * * * * * * * * 4646 * * * 85 0 * * * * * * 4713 0 0 L 86 4357 * * * * * * * * 275 3495 * * * * * * 4784 * * 86 0 * * * * * * 4713 0 0 M 87 3818 * * * * * * * * * 274 5008 * * * 4784 4843 * * * 87 0 * * * * * * 4713 0 0 F 88 5008 * * * 1474 * * * * * * 3818 * * * * * * 3429 1168 88 0 * * * * * * 4713 0 0 G 89 3665 * 2811 3380 * 5816 4843 * 4972 5606 * * * 1641 2729 4485 5037 5008 * * 89 0 * * * * * * 4713 0 0 V 90 2887 * * * * * * 3736 4871 3100 * * 1159 * 4784 * 3487 3933 * * 90 0 * * * * * * 4713 0 0 V 91 3818 * * * * * * 5037 * * 4108 * * * * 4406 1260 1412 * * 91 0 * * * * * * 4713 0 0 S 92 3246 * 2746 * * 4972 3755 4871 2982 4843 5294 3861 * 5364 2782 2474 * * * * 92 0 * * * * * * 4713 0 0 D 93 * * 248 * * 3793 * * * * * 5162 * * * * * * * 4108 93 0 * * * * * * 4713 0 0 T 94 2084 * * * * 3346 4990 3495 3818 * * * * * * * 3435 1387 * * 94 0 * * * * * * 4713 0 0 L 95 * * * * * * * 4104 4108 853 4105 * * * * * 2998 2765 * * 95 0 * * * * * * 4713 0 0 V 96 * * * * 4357 * * 3174 3990 4784 * * 3319 * 5013 5364 2538 1549 * 3797 96 0 * * * * * * 4713 0 0 I 97 5364 * * * * * * 1362 * 4004 4108 * 1949 * 4990 * * 2507 * * 97 86 * 4108 * * * * 4713 0 0 R 98 * * * * * * * * 2957 * * * 380 * 3284 * * * * * 98 0 * * * * 0 * 4580 0 1071 S 99 3476 * * * * * * * * * * * * * * 1858 657 * * * 99 0 * * * * * * 4713 0 0 Y 100 * * * * 3800 * * * * * * * * * * * * * * 107 100 58 * 4676 * * * * 4713 0 0 C 101 1598 1020 * * * 3943 * 3836 * * * * * * * 4592 * * * * 101 43 * 5093 * * 0 * 4717 0 1372 P 102 5414 * * * 3221 2522 4382 3816 * * * 3775 3077 * 2197 5354 3831 * * 3798 102 0 * * * * 0 * 4706 0 1000 N 103 2752 * 4072 * * 1123 * * 4506 * * 2182 * * * 3864 * * * * 103 0 * * * * * * 4713 0 0 K 104 3514 * 5162 3229 * 1360 * * 3646 * 4972 * 4108 4871 3594 * 4565 4072 * * 104 0 * * * * * * 4713 0 0 P 105 * 4646 * * * 4990 * * * 5162 4108 * 357 * * * * * * 4010 105 0 * * * * * * 4713 0 0 G 106 * * 3801 4877 2317 1671 5037 * * 2864 * 2424 * * * 5294 * * * * 106 0 * * * * * * 4713 0 0 F 107 4972 * * * 3820 4885 * * * * * 4843 * * * 2814 * * 2477 981 107 0 * * * * * * 4713 0 0 W 108 * * * * * * * * * * * * * * * * * * 0 * 108 51 4843 * 1000 1000 * * 4713 1000 0 A 109 1482 * * * * 3809 * * * * * 4885 * * * * 1217 3227 * * 109 0 * * * * * * 4713 0 0 D 110 2025 * 3699 2815 * 3697 4754 * 3406 * * 4030 4526 3829 * 3861 4260 5028 * * 110 0 * * * * * * 4714 0 0 K 111 4642 * * 3229 * * * * 1640 4479 * * 2446 3385 3986 * 3835 3731 * * 111 0 * * * * * * 4714 0 0 P 112 4871 * * * * * * * * * * * 97 * * * * 5028 * * 112 0 * * * * * * 4714 0 0 I 113 * * * * * * * 2942 * 2954 * * 818 * * * * 2525 * * 113 0 * * * * * * 4088 0 0 E 114 * * 2837 478 * * * * 2814 * * * * * * * * * * * 114 0 * * 0 * * * 2937 0 0 //