HHsearch 1.5 NAME c5zwoY_ FAM FILE c5zwoY_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5zwoY_.a3m DATE Sat Sep 1 08:33:09 2018 LENG 89 match states, 89 columns in multiple alignment FILT 85 out of 89 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.0 EVD 0.3992 -1.0128 SEQ >ss_dssp CHHHHHHHHHHHHHHHHHHSCHHHHHCCCCCCTTSCCBCCSCCCCCSSCCCCBTTCCCCCCCCSHHHHHHHHHHHHHHHHHHHHHTCCC >sa_dssp EDDDDCCEECCCCCDCDDDCEDEDDEDEEEECEEECDCCEDEEEDDDDEDDCDDDCEEEEDEEDDDDCCCECCDCDDCCDDCEDEDDDE >ss_pred CCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >ss_conf 96268863256544452076767521434444224613178989722488998712660067717999999999999999998776239 >Consensus skxxxekxxexxxxxrxxnxxxxqxxxxxxxsxxgrxxYxgxxPxNRfxIxPGyrWDGVdRsNGfExxxfxxxnxxxxxxxxayxxqxd >c5zwoY_ SKYEDEKAAEREQYLKNLNMGDVQKLGINVTSLLGRKLYDKPAPENRFAIMPGSRWDGVHRSNGFEEKWFAKQNEINEKKVQSYTLQED >UniRef50_Q7RWR8(281-376:377) Pre-mRNA-splicing factor cwc-26 n=1 Tax=Neurospora crassa RepID=CWC26_NEUCR E=2e-08 s/c=0.63 id=42% cov=100% SKDDEQLNAELKQQDR-WNDPMAQFLAPEEVKVKGRKkgtagrrpTYKGPAPPNRYGIKPGYRWDGVDRSNGFEAERFKALNRRERNKGLEYAWQMD >UniRef50_A3GI23(213-295:308) Predicted protein n=2 Tax=Pichia stipitis RepID=A3GI23_PICST E=6e-05 s/c=0.59 id=36% cov=91% -RQQKEKYVPKQSQFEDplLVFEDKQDEPENSTNAYSSYVYNKgVNPSNRFGIRAGYFWDGIDRSNGFEELVLRKQTEQKFQKM-------- >UniRef50_C4R4J7(67-182:183) Subunit of the RES complex n=1 Tax=Pichia pastoris GS115 RepID=C4R4J7_PICPG E=3e-17 s/c=0.77 id=48% cov=101% SQQEKQKAKEASEKLRNMNLPEVTQTATKRVappsyvddpllafspdkvkslqkdryiSQTGRKLYKSSFPDNRFSIMPGYRWDGIDRSNGWEQKVFKTT ALRQEKKVLSYTMQDD >UniRef50_D2V9K2(272-354:358) Predicted protein n=1 Tax=Naegleria gruberi RepID=D2V9K2_NAEGR E=3e-14 s/c=0.96 id=35% cov=87% ----KEQLKEEDPMARLITEKKKNQQDSKKSKTKKKKFYDGPHPENRFNIKPGWRWDGVDRSNGFENQYFKHMNNVKDRE--------- >UniRef50_B0ELI2(194-262:270) Pre-mRNA-splicing factor CWC26, putative n=4 Tax=Entamoeba RepID=B0ELI2_ENTDI E=3e-13 s/c=1.11 id=43% cov=69% -----------EEKAQEMNE---TKEGKKENSTKQRPKYQGKFPQNRFGIAPDYKWDGVDRGNGFEKKYFAEVN--------------- >UniRef50_C3YQI8(379-461:465) Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3YQI8_BRAFL E=1e-12 s/c=0.89 id=35% cov=90% ----DQMLKEQDREGDPM-LAFLSKKKSKGKDGKERPRYSGPApPPNRFNLWPGYRWDGVDRSNGFEKRFFQAQANKRAVKDEAY----- >UniRef50_Q8I4W6(307-383:390) Conserved Plasmodium protein n=1 Tax=Plasmodium falciparum 3D7 RepID=Q8I4W6_PLAF7 E=9e-07 s/c=0.71 id=44% cov=48% ------------------------------------------SPYNRFNIQAGYRWDGVIRGNGFEERRLEAQKMKEQENKLTY----- >UniRef50_A2FBH6(97-173:181) Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2FBH6_TRIVA E=6e-07 s/c=0.72 id=50% cov=45% -----------------------------------------PGQPNRFGIHPGPWWDGIDRSNGYERRRFEKKQEVDEEK--------- >UniRef50_A5DCP2(166-226:241) Putative uncharacterized protein n=2 Tax=Pichia guilliermondii RepID=A5DCP2_PICGU E=8e-12 s/c=1.17 id=47% cov=66% ----------------------VATTNTNPTSKTGRPTYsKGISPPNRFNIPAGAHWDGINRSNGFEELVMRRRNEINAEK--------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * S 1 * * * * * * * * * * * * * * * 325 2311 * * * 1 0 * * * * * * 2176 0 0 K 2 * * * * * * * * 930 * * * * 2681 1647 * * * * * 2 0 * * * * * * 2512 0 0 Y 3 * * 2544 3171 * * * 3014 3046 * * * * 1509 * * * * * 3045 3 0 * * * * * * 2512 0 0 E 4 * * 2919 1392 * * * * 3372 * * * 3223 2487 3257 * * * * * 4 0 * * * * * * 2660 0 0 D 5 * * 1262 3499 * * * * 1295 * * * * * 3522 * * * * * 5 0 * * * * * * 3106 0 0 E 6 * * * 1033 * * * * * 3812 * * * 1184 * * * * * * 6 0 * * * * * * 3106 0 0 K 7 * * 3460 3965 * * * * 1197 3582 3404 * * 3272 2974 * * * * * 7 0 * * * * * * 3178 0 0 A 8 2731 * * 4011 * * * 3661 * 1503 * 3582 * * 3671 * 3937 * * 2964 8 0 * * * * * * 3178 0 0 A 9 2730 * * 3965 * * * * 1528 * * 2009 * * * * * 2395 * * 9 0 * * * * * * 3178 0 0 E 10 * * 3965 584 * * * * * * * * 2964 * * 3671 * 4011 * * 10 0 * * * * * * 3178 0 0 R 11 3583 * * 2363 3661 * * * 2964 3582 * * * 1726 2953 * * * * * 11 95 3965 * 1000 1000 * * 3178 1000 0 E 12 * * 1949 2283 * * * * 3721 3576 * * * 2076 * 2849 * * * * 12 0 * * * * * * 3220 0 0 Q 13 * * 3797 1833 * * * * * * * * 3362 2844 1801 3013 * * * * 13 0 * * * * * * 3220 0 0 Y 14 * * * 2756 * * * * 2780 * 3362 * 3797 1818 2954 4032 * * * 3979 14 0 * * * * * * 3220 0 0 L 15 2076 * 3721 * 2434 3478 * 2416 * 2826 * * * 3576 * * * * * * 15 0 * * * * * * 3220 0 0 K 16 * * 2091 3013 * * * * 2885 * * * * 3879 1191 * * * * * 16 114 * 3721 * * * * 3220 0 0 N 17 3698 * 2367 2375 * * * 3683 * 3247 * 2697 3382 * 3278 * * * * * 17 311 2367 * 1000 1000 0 * 3151 1546 1000 L 18 * * * * 3797 * * 3362 * 1416 2087 * * * 4032 * * * 2647 * 18 136 * 3478 * * * * 3220 0 0 N 19 * * * * * * * * 3649 * * 714 * * * * 2481 2924 * * 19 0 * * * * 0 * 3094 0 1000 M 20 * * 2647 2597 1960 * * * * 2579 1995 * * * * * * * * * 20 102 * 3879 * * * * 3220 0 0 G 21 3404 * * 2964 * 1569 * * 3272 * * 3661 1955 * * * * * * * 21 0 * * * * * 0 3178 0 1000 D 22 3460 * 2356 1446 3404 * * 3937 3272 * 3582 * * * * * * * * * 22 119 * 3661 * * * 0 3178 0 1000 V 23 2530 * * * * * * 3608 2122 3364 * * * * * 3856 * 1519 * * 23 0 * * * * 0 * 3159 0 1446 Q 24 3841 * * * * * * * * * * 3382 * 1061 * 2790 2249 * * * 24 0 * * * * * * 3199 0 0 K 25 * * 3203 * 2753 * 4111 * 1597 3107 * * * 2566 * * 3841 * * * 25 0 * * * * * * 3199 0 0 L 26 3874 * * 2487 4386 * 4350 * 3527 2282 * 2993 * 3382 * * 2809 * * * 26 0 * * * * * * 3199 0 0 G 27 2386 * 3382 * * 2356 4111 * 3527 * 4386 2862 3203 * * * 3664 * * * 27 0 * * * * * * 3199 0 0 I 28 * * * 3203 * * * 4125 2970 3093 3884 * 3848 * * 2452 2174 4386 * * 28 102 3874 * 4954 47 * * 3199 1000 0 N 29 * * * 2080 * * * * 1393 * * 2191 * 2611 * * * * * * 29 69 4422 * 5087 43 * * 2977 1000 0 V 30 * * * 2918 * 3629 * * 2132 * * * 2541 * 3069 3479 3833 4232 * 4196 30 109 3787 * 1000 1000 * * 2977 1000 0 T 31 * * * * * * * 4083 3850 * * 3287 * * 4233 3874 1318 2019 * * 31 158 3269 * 4833 52 * * 2758 1494 0 S 32 * * 3928 * * * * * 3249 * * 3823 * * * 517 4064 * * * 32 0 * * * * * * 2768 0 0 L 33 3823 * * * * 3928 * 4334 1864 2415 * * 2958 4048 * * 3116 4405 * * 33 0 * * * * * * 2768 0 0 L 34 * * * * * * * 4064 2131 2231 3276 * * * * * 1622 * * 3823 34 0 * * * * * * 2768 0 0 G 35 * * * 4004 * 400 * * 4191 * * * * 4187 * 3836 * * * * 35 0 * * * * * * 2743 0 0 R 36 * * * * * * * * 1908 * * * * * 547 4348 * * * * 36 0 * * * * * * 2710 0 0 K 37 * * * * * * * * 1769 * 4303 * 806 * 4837 * * * * 4348 37 31 5555 * 3000 193 * * 2710 1000 0 L 38 * * * 4943 4995 * * * 3912 1339 4326 * * * 4107 * 3851 2018 * 4311 38 0 * * * * * * 2704 0 0 Y 39 * * * * 5086 * * * * * * * * * * * * * * 43 39 50 4865 * 0 * * * 2804 1000 0 D 40 3814 * 4005 2904 * * * * 1619 * * 3332 * 2570 5407 3843 4422 * * * 40 37 5295 * 0 * * * 2813 1000 0 K 41 * * * * * 417 * * 2658 * * 4904 * * * 4080 * * * * 41 81 4197 * 0 * * * 2813 1254 0 P 42 3730 * * * * 4372 * 3115 5083 4854 * 4883 1183 * * 3505 5505 3896 * 4467 42 60 4613 * 0 * * * 2956 1497 0 A 43 1712 * * * 2155 5316 4891 * * * * 4344 3453 6008 * 3247 5105 * 4402 3763 43 88 4489 6064 0 * * * 2974 1293 0 P 44 4650 * * * * * * * * 5996 5395 * 239 4162 * * 5808 * * * 44 52 4815 * 0 * * 0 2864 1438 1000 E 45 5045 * 3925 2900 * * 6267 5851 * 6295 6334 * 927 3664 6441 3854 * * * 5112 45 26 5802 * 0 * 0 * 2888 1195 1000 N 46 * * * * * * * * * * * 40 * * * * 5204 * * * 46 0 * * * * * * 2932 0 0 R 47 5285 * * * * * * * * * * * * * 37 * * * * * 47 0 * * * * * * 2937 0 0 F 48 * * * * 400 * * * * * * * * * * * * * * 2046 48 0 * * * * * * 2937 0 0 A 49 5678 * 4003 * * 1145 * * * * * 1297 * 6275 * 4440 * * * * 49 0 * * * * * * 2937 0 0 I 50 * * * * * * * 31 * 5550 * * * * * * * * * * 50 0 * * * * * * 2937 0 0 M 51 4089 * * 3710 * * 5678 * 2328 3400 3849 * 3433 3916 2246 6037 6721 6044 3785 * 51 0 * * * * * * 2937 0 0 P 52 2858 * * * * * * * * * * * 254 * * 5395 * * * * 52 0 * * * * * * 2937 0 0 G 53 * * 5439 * * 34 * * * * * * * * * * * * * * 53 0 * * * * * * 2937 0 0 S 54 5899 4745 * * 3780 * 3067 * * * * 6361 5678 * 3356 5678 * * 4109 870 54 0 * * * * * * 2937 0 0 R 55 6105 * * * 3727 * 3128 * 4493 5502 5137 * * * 554 * * * 5678 * 55 0 * * * * * * 2937 0 0 W 56 * * * * * * * * * * * * * * * * * * 36 5358 56 0 * * * * * * 2937 0 0 D 57 * * 0 * * * * * * * * * * * * * * * * * 57 0 * * * * * * 2937 0 0 G 58 * * * * * 0 * * * * * * * * * * * * * * 58 0 * * * * * * 2937 0 0 V 59 * * * * * * * 2638 * 5185 * 5502 * * 6110 * * 367 * * 59 0 * * * * * * 2937 0 0 H 60 * * 399 * * * 5678 3289 * * * 5049 * * * * * 3477 * * 60 0 * * * * * * 2937 0 0 R 61 * * * * * * * * * * * * * * 0 * * * * * 61 0 * * * * * * 2937 0 0 S 62 * * * * * 1711 * * * * * * * * * 526 * * * * 62 0 * * * * * * 2937 0 0 N 63 * * * * * * * 6260 * * * 231 * * * 5206 3604 5285 * * 63 0 * * * * * * 2937 0 0 G 64 * * * * * 77 * * * * * 4269 * * * * * * * * 64 0 * * * * * * 2937 0 0 F 65 5808 * * * 402 * * * * * * * * * * * 6055 * 4959 2487 65 0 * * * * * * 2914 0 0 E 66 * * * 0 * * * * * * * * * * * * * * * * 66 0 * * * * * * 2914 0 0 E 67 3900 * 4490 2884 * 4436 * * 1473 * 6228 4404 * 2662 3453 5555 6023 * * * 67 0 * * * * * * 2914 0 0 K 68 6290 * 4713 3581 * 6405 * * 1264 3908 6079 5379 * 3837 1933 * * * * * 68 0 * * * * * * 2914 0 0 W 69 * * * * 3929 * 5798 4463 * 3202 3699 * * * 2528 * * 4004 1690 2840 69 0 * * * * * * 2914 0 0 F 70 6036 * * * 614 * * 4651 * 2490 4793 * * * * * * 4873 * 4532 70 0 * * * * * * 2914 0 0 A 71 2691 * 6024 2216 * * * 5379 2222 5303 4173 4615 * 3046 3468 4531 * * * * 71 12 * 6867 * * * * 2914 0 0 K 72 2542 * 6246 3769 * * 6586 5568 1954 6721 4449 6290 * 6071 2112 4456 3840 6845 * 6176 72 0 * * * * * 0 2915 0 1000 Q 73 6559 * * 6009 * * * 3137 2942 3461 3279 * * 1730 2908 6005 4481 4598 * * 73 0 * * * * * 0 2915 0 1000 N 74 2587 * * 5483 * 5270 5253 * 4770 6623 * 900 * 5655 * 3093 4668 * * * 74 0 * * * * 0 * 2915 0 1000 E 75 4877 * 3495 1332 * * * 6828 4175 5058 5207 3613 * 3872 3031 4913 5365 5114 * * 75 0 * * * * * * 2937 0 0 I 76 6331 * 5114 * * 6013 * 3776 1316 3497 5436 4826 * 4236 2511 6208 6563 4205 * 6069 76 14 6659 * 1000 1000 * * 2937 1000 0 N 77 3310 * 5030 3209 * * * * 1885 6375 5114 2887 * 2871 3432 5169 4859 6755 * 6310 77 75 4297 * 1000 1000 * * 2937 1640 0 E 78 1517 * 3830 2431 5276 * 5989 * * 6026 * 6197 * 4921 2935 4109 6170 5101 * 4067 78 23 5974 * 1000 1000 * * 2923 1000 0 K 79 6661 * 4174 3694 5275 * 6593 5530 2342 4236 6727 4230 * 3582 2559 5238 2973 3651 * * 79 0 * * * * * * 2923 0 0 K 80 4069 * 3767 1773 * 6127 * * 1403 * * 5003 * 3439 5205 4985 * * * * 80 0 * * * * * * 3039 0 0 V 81 2666 * 3273 2578 5983 5146 4892 3396 3719 4361 4490 5401 * 4215 5175 5018 4646 4218 * * 81 0 * * * * * * 3117 0 0 Q 82 6337 * 4798 1548 * * 6075 3979 4536 2613 6363 * * 2886 * 4631 * 4524 * 3418 82 0 * * * * * * 3103 0 0 S 83 1150 * 4471 3102 5721 * * * 3417 6225 4940 * * 4939 * 2780 5758 * * 4935 83 0 * * * * * * 3103 0 0 Y 84 * * * * 4936 * 4263 * 4838 * 5596 * * 3692 * * * * 3375 544 84 0 * * * * * * 3063 0 0 T 85 2461 * * 3080 * * * * 4391 * * 4723 * 3487 * 1913 2415 3787 * * 85 0 * * * * * * 2874 0 0 L 86 4612 * 3813 * * * * 3449 * 2627 2777 3404 * * * * * 2518 2187 * 86 0 * * * * * * 2874 0 0 Q 87 4462 * * 1939 * 4593 * * * * * * * 1013 4044 3376 * * * * 87 0 * * * * * * 2813 0 0 E 88 * * 1114 2406 * * * * * * 1949 * * 3472 * * * * * * 88 0 * * * * * * 2813 0 0 D 89 * * 0 * * * * * * * * * * * * * * * * * 89 0 * * 0 * * * 2322 0 0 //