HHsearch 1.5
NAME  c5zvtM_
FAM   
FILE  c5zvtM_
COM   /bmm/www/servers/phyre2/HH/hhmake -i c5zvtM_.a3m 
DATE  Sat Jul  7 08:23:02 2018
LENG  41 match states, 41 columns in multiple alignment
FILT  4 out of 8 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100)
NEFF  1.7 
EVD   0.5028  3.5338 
SEQ
>ss_dssp
CCCCCSSSSSCSSCTTCCCCCCTTSCC-CCCCCCCCHHHHC
>sa_dssp
EEEEEEEDEECEECEEDEEEEEEEEEE-EEEEEDEEEEEEE
>ss_pred
CCCEEEEEEEEEECCCCEECCCCCCCCCCCCEEECCCCCCC
>ss_conf
95322788898641797250552000111420342755359
>Consensus
GNxxsxvxxxNixGDgNxFxPsaexxssAxPslxLxPGxLN
>c5zvtM_
GNVQTSVNTYNITGDGNSFTPTSDMTSTAAPAIDLKPGVLN
>UniRef50_P11078(2-42:708) Outer capsid protein mu-1C n=12 Tax=Mammalian orthoreovirus RepID=MU1_REOVD  E=6e-05 s/c=1.19 id=50% cov=102%
GNASSIVQTINVTGDGNVFKPSAETSSTAVPSLSLSPGMLN
>UniRef50_Q5IW26(2-42:676) Structural protein muB n=18 Tax=Avian orthoreovirus RepID=Q5IW26_9REOV  E=6e-11 s/c=1.68 id=48% cov=102%
GNATSVVQNFNIQGDGNHFAPSAETTSSAVPSLSLNPGLLN
>UniRef50_Q6XFP2(2-42:653) Outer capsid protein n=7 Tax=Aquareovirus RepID=Q6XFP2_AQRVA   E=4e-10 s/c=1.61 id=71% cov=102%
GNVQTSTNVYNINGDNNAFTPNSEMVASASPAIDLKPGVLN
#
NULL   3706	5728	4211	4064	4839	3729	4763	4308	4069	3323	5509	4640	4464	4937	4285	4423	3815	3783	6325	4665	
HMM    A	C	D	E	F	G	H	I	K	L	M	N	P	Q	R	S	T	V	W	Y	
       M->M	M->I	M->D	I->M	I->I	D->M	D->D	Neff	Neff_I	Neff_D
       0	*	*	0	*	0	*	*	*	*	
G 1    *	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	1
       0	*	*	*	*	*	*	1707	0	0	

N 2    *	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	2
       0	*	*	*	*	*	*	1707	0	0	

V 3    988	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	1012	*	*	3
       0	*	*	*	*	*	*	1707	0	0	

Q 4    *	*	*	*	*	*	*	*	*	*	*	*	*	1012	*	1977	2000	*	*	*	4
       0	*	*	*	*	*	*	1707	0	0	

T 5    *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	988	1012	*	*	*	5
       0	*	*	*	*	*	*	1707	0	0	

S 6    *	*	*	*	*	*	*	1977	*	*	*	*	*	*	*	1012	*	2000	*	*	6
       0	*	*	*	*	*	*	1707	0	0	

V 7    *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	1931	439	*	*	7
       0	*	*	*	*	*	*	1707	0	0	

N 8    *	*	*	*	*	*	*	*	*	*	*	1012	*	988	*	*	*	*	*	*	8
       0	*	*	*	*	*	*	1707	0	0	

T 9    *	*	*	*	*	*	*	*	*	*	*	2000	*	*	*	*	1036	1931	*	*	9
       0	*	*	*	*	*	*	1707	0	0	

Y 10   *	*	*	*	2000	*	*	1977	*	*	*	*	*	*	*	*	*	*	*	1012	10
       0	*	*	*	*	*	*	1707	0	0	

N 11   *	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	11
       0	*	*	*	*	*	*	1707	0	0	

I 12   *	*	*	*	*	*	*	423	*	*	*	*	*	*	*	*	*	1977	*	*	12
       0	*	*	*	*	*	*	1707	0	0	

T 13   *	*	*	*	*	*	*	*	*	*	*	1931	*	2000	*	*	1036	*	*	*	13
       0	*	*	*	*	*	*	1707	0	0	

G 14   *	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	14
       0	*	*	*	*	*	*	1707	0	0	

D 15   *	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	15
       0	*	*	*	*	*	*	1707	0	0	

G 16   *	*	*	*	*	439	*	*	*	*	*	1931	*	*	*	*	*	*	*	*	16
       0	*	*	*	*	*	*	1707	0	0	

N 17   *	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	17
       0	*	*	*	*	*	*	1707	0	0	

S 18   1931	*	*	*	*	*	2000	*	*	*	*	*	*	*	*	2097	*	1977	*	*	18
       0	*	*	*	*	*	*	1707	0	0	

F 19   *	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	19
       0	*	*	*	*	*	*	1707	0	0	

T 20   2000	*	*	*	*	*	*	*	1977	*	*	*	*	*	*	*	1012	*	*	*	20
       0	*	*	*	*	*	*	1707	0	0	

P 21   *	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	21
       0	*	*	*	*	*	*	1707	0	0	

T 22   *	*	*	*	*	*	*	*	*	*	*	1931	*	*	*	988	2097	*	*	*	22
       0	*	*	*	*	*	*	1707	0	0	

S 23   988	*	*	*	*	*	*	*	*	*	*	*	*	*	*	1012	*	*	*	*	23
       0	*	*	*	*	*	*	1707	0	0	

D 24   *	*	2097	384	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	24
       0	*	*	*	*	*	*	1707	0	0	

M 25   *	*	*	*	*	*	*	*	*	*	1012	*	*	*	*	*	988	*	*	*	25
       0	*	*	*	*	*	*	1707	0	0	

T 26   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	1977	1048	1931	*	*	26
       0	*	*	*	*	*	*	1707	0	0	

S 27   1931	*	*	*	*	*	*	*	*	*	*	*	*	*	*	439	*	*	*	*	27
       0	*	*	*	*	*	*	1707	0	0	

T 28   *	*	*	*	*	*	*	*	*	*	*	*	*	*	*	965	1036	*	*	*	28
       0	*	*	*	*	*	*	1707	0	0	

A 29   0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	*	29
       0	*	*	*	*	*	*	1707	0	0	

A 30   2097	*	*	*	*	*	*	*	*	*	*	*	*	*	*	1931	*	988	*	*	30
       0	*	*	*	*	*	*	1707	0	0	

P 31   *	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	31
       0	*	*	*	*	*	*	1707	0	0	

A 32   1012	*	*	*	*	*	*	*	*	*	*	*	*	*	*	988	*	*	*	*	32
       0	*	*	*	*	*	*	1707	0	0	

I 33   *	*	*	*	*	*	*	1012	*	988	*	*	*	*	*	*	*	*	*	*	33
       0	*	*	*	*	*	*	1707	0	0	

D 34   *	*	1012	*	*	*	*	*	*	*	*	*	*	*	*	988	*	*	*	*	34
       0	*	*	*	*	*	*	1707	0	0	

L 35   *	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	35
       0	*	*	*	*	*	*	1707	0	0	

K 36   *	*	*	*	*	*	*	*	1012	*	*	2000	*	*	*	1977	*	*	*	*	36
       0	*	*	*	*	*	*	1707	0	0	

P 37   *	*	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	37
       0	*	*	*	*	*	*	1707	0	0	

G 38   *	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	*	*	*	*	38
       0	*	*	*	*	*	*	1707	0	0	

V 39   *	*	*	*	*	*	*	*	*	2000	1977	*	*	*	*	*	*	1012	*	*	39
       0	*	*	*	*	*	*	1707	0	0	

L 40   *	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	*	*	40
       0	*	*	*	*	*	*	1707	0	0	

N 41   *	*	*	*	*	*	*	*	*	*	*	0	*	*	*	*	*	*	*	*	41
       0	*	*	0	*	*	*	1707	0	0	

//