HHsearch 1.5 NAME c5yugE_ FAM FILE c5yugE_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5yugE_.a3m DATE Sat May 5 08:28:19 2018 LENG 102 match states, 102 columns in multiple alignment FILT 146 out of 215 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.9 EVD 0.4970 0.6915 SEQ >ss_dssp CCCCCTTTCCSCCSCCEEEEECTTSCEEEECHHHHHHHHTTCHHHHHCTTSSCEEECTTTCCEEECSCGGGGGGCEECTTSSEECTTGGGSCCCCTTCSS CC >sa_dssp EEBDAEEDCCEECEDDCDBBCCEEEEDACABDEBACBCEEDDAACECBEEDEDCDDBCEDDDEBACEBDBBEEDBEEBEDDCBABEEBCEDEBEDEDDEE DE >ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCEEECCCCCEECCCCCCCCCCCCCCCC CC >ss_conf 9340777768888764377655777502020576633342770435455666555225898726310118700101155687771567432225367535 79 >Consensus kxCxnxxCgxxxxxxwrkxwxxrxgxxxxlCxxCxxxxxkgxxCxxcxxxxxxxixCxxCxxxxHxxCxxsxxxxexxdxxxyxCxxCxxxxxxnxxxxg xx >c5yugE_ KMCMNASCGTTSTVEWKKGWPLRSGLLADLCYRCGSAYESSLFCEQFHKDQSGWRECYLCSKRLHCGCIASKVTIELMDYGGVGCSTCACCHQLNLNTRG EN >UniRef50_UPI00006CFA00(164-283:510) PHD-finger family protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CFA00 E=9e-07 s/c=0.46 id=23% cov=89% KSCFNQYCpkdknissvpspqqestkKQSVNGQYKQAKLEKTGEKVTFCDLCCQRYQEKHFCyycqqvyfDDYNIDDKEWILCDTCDRWCHLHCeeekIK KAFSSSQSENVQYDCPRCRC------------ >UniRef50_C5KN49(1202-1289:1345) Putative uncharacterized protein n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KN49_9ALVE E=8e-18 s/c=1.04 id=22% cov=81% RACDNPVLAPPVEDYIRNTMQMRFFYIVECCRHFSTVYTD--MCEICnvvttlYTDTDAWITCDVCDKWYHQKCAG-----VSPDATSFTCPTCS----- -------- >UniRef50_C0LNQ6(1728-1828:4219) Myeloid/lymphoid or mixed-lineage leukemia n=6 Tax=Eukaryota RepID=C0LNQ6_DANRE E=1e-18 s/c=0.94 id=25% cov=89% -----KSCGATKPG---KAWDAQWSHDFSLCHDCAKRLTKGNLCPLCNKGyddddcDSKMMKCKKCDRWVHAKCESlTDDMCELMsslpENVVYTCTNCT ESHPAEWRT---- >UniRef50_B9I5A8(410-505:1078) SET domain protein (Fragment) n=5 Tax=rosids RepID=B9I5A8_POPTR E=1e-11 s/c=0.74 id=26% cov=80% -------CGTSLPLKPAKKIKGTSPGGQLLCKTCARLTKSKHFCGICkkvwnHSDSGSWVRCDGCKVWVHAECDKiSSNRFKDLGGTDYYCPAC------ -------- >UniRef50_O46025(506-613:2475) Protein T12D8.1, partially confirmed by transcript evidence n=2 Tax=Caenorhabditis elegans RepID=O46025_CAEEL E=2e-13 s/c=0.71 id=25% cov=95% --CMKPLLDKIPQGPWRCQWCSRcrrcnhkaaSGNDLTsqgLCFPCASLR-KCPRCERNYQLNEKLIRCSQCSKWQHGACEG-LYTDEQLEQAAIDRMRC SACRPKRVQPSG-- >UniRef50_B0WUW9(324-383:2934) Set domain protein n=20 Tax=Eukaryota RepID=B0WUW9_CULQU E=0.0002 s/c=0.78 id=22% cov=57% ----------------RSGWQ---------CGSC----KKCQICRVPDSSEGRTVGCEQCDKIYHASCLRPI--MTSIPKYGWKCRCC------------ -- >UniRef50_B8LKE6(54-150:756) Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=B8LKE6_PICSI E=1e-05 s/c=0.53 id=23% cov=64% -------------------------RFVSVCKSCNCLLNSGGICCCCFRKISDdkgllvvALSCCKCRHRVHCDCVSKNIGEEDVcsDSKSFVCVDCS-- ----------- >UniRef50_O43918(299-354:545) Autoimmune regulator n=30 Tax=Eutheria RepID=AIRE_HUMAN E=6e-05 s/c=0.87 id=25% cov=24% -------------------------------------------------------------------------------SGTWRCSSCLQATVQEVQPRA EE # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * K 1 * * * * * * * * 976 * * * * * 1025 * * * * * 1 0 * * * * * * 4791 0 0 M 2 3617 * * * * * * 2267 3688 * 5305 * * 2939 5559 3932 4196 1573 * * 2 0 * * * * * * 4874 0 0 C 3 * 0 * * * * * * * * * * * * * * * * * * 3 120 * 3652 * * * * 5780 0 0 M 4 3614 * 3385 5135 2644 4239 5077 3488 5755 * 2095 * * 5739 * 4703 * 3179 5650 5484 4 212 * 2872 * * * 0 5336 0 1821 N 5 * 4758 5155 * * * * * 3138 * * 403 * * * * 3935 * * * 5 115 3935 6486 2000 415 1267 775 5091 1310 2413 A 6 3108 3795 * * 5028 * * * 3101 * * 4559 2047 3398 * 2807 4524 3334 * * 6 47 4971 * 0 * 278 2514 5986 1000 2295 S 7 4870 * 3005 4219 4737 * 4178 * 2828 4771 * * 3467 5680 * 2016 6316 3942 5978 3906 7 0 * * * * 0 * 6440 0 1000 C 8 * 260 * * * * * * * 2599 * * * * * * * * * * 8 137 3854 5547 3202 166 * * 6601 2040 0 G 9 3961 * 4516 3566 5992 978 6215 * 3324 * 5695 3943 * 4817 * 6061 4797 * * * 9 18 6346 * 1000 1000 * 0 6573 1000 1139 T 10 3041 5251 5578 * * * * * 4252 6747 * 4273 3507 4310 5023 2310 1895 3676 * * 10 0 * * * * * 0 6573 0 1139 T 11 4394 5341 5228 * * 5058 4897 5649 3926 * * * 3692 * 3284 2149 2209 2943 * * 11 0 * * * * 0 * 6573 0 1139 S 12 5174 * 2629 * 5353 4335 * * 3660 4255 * 5317 2411 4784 * 2821 3053 3417 * * 12 21 6084 * 0 * * * 6542 1000 0 T 13 * * 2969 3752 * 4254 6165 4948 * * * 5003 2468 4214 * 2470 2393 5088 * 4913 13 19 6287 * 2000 415 * * 6542 1000 0 V 14 * 4106 4001 4596 4804 1681 * 6111 3815 4268 * 4948 2513 * 4052 5746 4246 6197 * * 14 166 * 3205 * * * * 6542 0 0 E 15 * 3309 * 3292 * 3901 * * 2395 3301 4820 3692 3638 3486 5527 5593 4206 * * 4072 15 27 * 5739 * * * 0 6482 0 2293 W 16 * * * * * 5593 4682 3494 * 5875 * * 4924 4925 5426 4747 3988 4132 850 4906 16 59 * 4642 * * * 0 6380 0 2259 K 17 3946 * 3602 * * * * * 2067 * * * 4787 * 947 4077 * * * * 17 19 * 6244 * * 881 1130 6166 0 2596 K 18 4000 3321 * * * * * 5615 1117 5716 * 4174 3357 4969 4492 3456 * 5912 * * 18 105 * 3835 * * 2003 414 6076 0 2379 G 19 2987 * 4930 4747 5218 1339 6470 * 3266 4725 * 4922 * 5877 * 3078 4057 * * * 19 109 * 3776 * * * 0 6246 0 3199 W 20 5960 * * * * * 6563 4962 5012 4197 3758 * 3865 5851 * 3819 4720 * 825 5466 20 70 5378 5406 2585 263 1814 483 5853 1000 3901 P 21 5422 4040 3637 * 5597 * 6441 4884 2849 4945 * 3882 4511 3800 3991 1953 3418 * * * 21 131 3874 5752 0 * 3147 173 5779 1718 3119 L 22 3364 6136 4656 3950 * 3696 4610 4430 * 2667 3670 5139 6415 * 5928 2396 4605 3378 * * 22 59 6346 5157 0 * 1523 617 5918 1000 3258 R 23 * * 4362 4017 * * * * 2753 * * * 4205 4195 944 4745 3731 * * * 23 100 4718 5122 3170 170 1827 477 5818 1209 2920 S 24 5614 * 5173 2601 3570 4145 * * 3756 * * 4165 5378 * 5967 1880 3763 * 2929 * 24 46 6517 5601 3000 193 2256 339 5908 1000 3274 G 25 3805 * * 5097 4114 893 2874 * 5347 * * * 4783 6483 * 3870 * 5252 * * 25 116 4961 4479 677 1416 2576 265 5987 1172 3020 L 26 3996 * 2549 3052 * 3711 3714 * 3533 5113 6030 3620 5083 5843 4362 3488 * 4714 * 4091 26 54 * 4762 * * 1379 700 6009 0 3331 L 27 5946 6151 3817 5204 2465 5051 4623 3787 4235 4501 * 3594 4003 3783 5672 4471 2776 5538 * * 27 93 4628 5492 2450 292 1923 442 5982 1594 2814 A 28 2805 3478 * 5970 3021 * * 4926 * 2570 * 5397 * 4126 * * 6020 1992 * 3664 28 29 5674 * 1585 585 864 1150 6039 1000 2472 D 29 4231 * 3487 2978 4104 5113 * 5779 * 3214 6701 6148 5310 4235 4276 2779 2583 6510 4630 * 29 34 5421 * 1585 585 193 3000 6064 1209 1815 L 30 * 3889 * * 3249 * * 3227 * 738 3839 * * * * * * 4292 * * 30 0 * * * * 0 * 5667 0 1000 C 31 * 0 * * * * * * * * * * * * * * * * * * 31 73 4350 * 1585 585 * * 5464 1221 0 Y 32 4064 * 2219 5296 4984 4134 4761 5267 4283 3674 * 3035 4390 3474 3953 5154 5886 5534 * 5161 32 0 * * * * * * 5464 0 0 R 33 3048 * 3141 4997 * 5886 3378 * 2537 5107 * 4810 4504 4232 3577 2880 4160 * * 6438 33 0 * * * * * * 5464 0 0 C 34 * 153 * * 4283 * * * 4350 * * * * * * * * * * * 34 39 5620 7347 3585 126 * * 5464 1122 0 G 35 2710 5175 5051 * 4506 1465 * * 5071 6826 6884 4851 * * 7187 2795 5779 * 6562 3039 35 0 * * * * * 0 6061 0 1000 S 36 * 5080 * 4450 * 6997 6080 3733 2662 2752 5306 * * 3241 2900 2488 4069 5825 * * 36 16 * 6463 * * * 0 6061 0 1000 A 37 2925 5498 * 4370 * 4182 4636 4749 5939 1672 5384 3408 * 3773 3873 4413 * 5127 * * 37 184 3775 4428 3717 114 * 0 6047 2115 1487 Y 38 * 4411 * * 2737 * 4644 * 5816 4091 * * * 3711 3025 5542 5623 * 3860 1408 38 44 6290 5842 0 * 978 1023 5420 1000 2941 E 39 4980 * 3676 1946 * 6722 6884 * 2013 6197 * 3035 * 4364 4866 4338 3507 6816 * * 39 0 * * * * 1870 461 5793 0 2188 S 40 5004 * 5195 4214 * * 5211 * 1169 * 6648 4318 * 3807 2870 2761 * * * * 40 141 6506 3601 0 * * 0 5744 1000 2132 S 41 * 3457 4536 * * 1041 * * 4025 5211 * 4997 6567 4695 5306 2481 7223 * * * 41 83 4475 6545 1585 585 1465 649 5686 1221 2636 L 42 * * 6194 4275 4381 4566 3536 6715 4119 6244 5798 2343 4579 3480 5313 4454 5779 2730 4153 4813 42 49 4907 * 2322 322 1485 638 5669 1311 2150 F 43 5779 4891 * * 1324 * 6143 3951 * 5538 5252 * * * 6060 4150 6580 3897 4634 2102 43 72 5563 5166 3145 173 * 0 5714 1479 2331 C 44 * 0 * * * * * * * * * * * * * * * * * * 44 76 4629 6526 2574 265 * 0 5721 2074 2627 E 45 4659 5653 3316 2622 * 3927 * 4109 4568 * * * 1682 3757 5069 6144 4617 6349 * 5093 45 0 * * * * 1594 580 5713 0 2413 Q 46 * 3743 5869 5322 3529 * 5766 1910 5211 4031 4369 5128 * 6238 5047 * 3185 2955 5186 4754 46 16 6533 * 2585 263 * 0 5720 1000 2627 F 47 * 569 6546 5549 2912 * * * * * * 5062 3987 * 6278 6062 * 6464 * 5128 47 439 2006 6211 2550 270 * 0 5730 3816 2627 H 48 6193 * 3855 3459 5656 4005 2270 5470 4027 4968 6190 2975 * 5366 4396 6586 * 6585 * 2415 48 108 3796 * 2441 294 886 1123 5715 3004 2276 K 49 3730 * 2696 3265 * 6438 * 5895 2375 4963 6232 * * 2881 3445 3183 4243 6773 * * 49 453 1891 * 2753 232 2202 353 5748 4205 2049 D 50 4943 * 1868 2683 4736 4890 5867 5564 3520 4333 * 2721 * * 5665 4063 * * * 4051 50 32 5525 * 2474 286 * 0 5746 1651 1962 Q 51 3994 * 2438 2227 * 3117 4642 5694 6239 * * 4111 5318 4518 5077 3771 4410 3967 * 6523 51 15 6606 * 2322 322 1338 726 5748 1000 1962 S 52 4043 6931 3102 2507 * 3087 * * 3422 6256 * 6489 7003 3676 5686 2264 3752 5987 * * 52 0 * * * * * 0 5838 0 1509 G 53 6061 * 3476 3040 4343 2136 * * 2701 4111 3591 5290 4729 5374 4370 4230 * * * 6248 53 80 4220 * 2699 241 0 * 6027 2483 1509 W 54 2661 * * * * * * 3433 * 3836 2226 * * * * * 6065 6105 1299 5075 54 0 * * * * * * 5811 0 0 R 55 5785 * * * * * * 1800 * 2553 4114 * * * 2399 * 4493 2105 * * 55 20 6214 * 0 * * * 5811 1000 0 E 56 5417 1854 6706 3968 6857 3650 5712 5944 4604 4301 6126 6276 5284 1826 5807 6473 5310 5510 * * 56 0 * * * * * * 5320 0 0 C 57 * 222 * * * * * * * 3115 * * * * * * 5193 * * * 57 0 * * * * * * 5358 0 0 Y 58 5217 5339 1471 2381 * 5148 6885 6947 5404 6529 * 2696 * 5577 6114 3947 4627 6387 * 6684 58 8 7544 * 1000 1000 * * 5358 1000 0 L 59 4374 * 5697 5055 5132 3223 4576 5810 3704 4577 5609 2703 * 3742 4062 2871 4185 4894 6652 4489 59 239 2714 * 437 1935 * * 5358 1666 0 C 60 * 0 * * * * * * * * * * * * * * * * * * 60 0 * * * * * * 5358 0 0 S 61 5563 6261 2822 2895 6345 3595 3679 * 2437 6006 6824 3457 3841 4320 4525 4918 6520 * * 6748 61 0 * * * * * * 5358 0 0 K 62 5153 * 5706 4834 6279 5304 4106 5290 1492 5588 * 5406 * 4562 1952 4545 5776 4879 * * 62 0 * * * * * * 5358 0 0 R 63 4655 5553 * * 4237 4016 * 2887 * * * * * * 3684 4417 6317 5941 980 5136 63 0 * * * * * * 5331 0 0 L 64 5227 5290 * * 3369 * * 3883 * 3521 4829 5404 2963 4427 * 5011 4796 2280 6691 2475 64 6 7886 * 3000 193 * * 5331 1000 0 H 65 2963 * * * * * 198 * * * * * * * * * * * * * 65 0 * * * * * * 5331 0 0 C 66 3040 2785 6247 * 4613 3779 5272 4650 2737 3522 4640 * 5574 4306 6187 4331 3916 5111 6718 5380 66 0 * * * * * * 5331 0 0 G 67 3752 * 4012 2872 6088 2151 4661 5444 2988 6063 6374 5033 5301 4797 5072 3923 4624 5724 * 5330 67 198 2963 * 1585 585 * * 5331 1000 0 C 68 * 198 * * * * * * * * * * * * * * * 2963 * * 68 138 3735 5948 1641 558 * * 5331 2936 0 I 69 4838 5516 3564 2938 * * 6204 2846 * 2781 2569 * * * * 5383 * 2074 * * 69 74 7169 4530 0 * 1046 956 5307 1000 1354 A 70 3314 * 5426 5132 * 2134 * 7079 2756 6186 * 3563 * 2645 4439 3580 5583 4169 * * 70 438 2588 3389 711 1362 555 1648 6607 3725 2908 S 71 4734 * 4596 4444 4000 6023 * 5475 4151 5521 * 4339 3106 * 4609 1626 2816 5369 * * 71 84 4918 5407 867 1147 669 1430 6499 1963 3638 K 72 4246 5296 4342 3372 * * 6501 3851 2343 3689 * 3145 3265 3906 3980 5025 * 4537 * * 72 75 * 4310 * * 1475 643 6545 0 2569 V 73 4352 * 3760 2892 5486 3119 3713 4028 * 3349 * 2832 * 6562 6253 3166 5349 4974 * 4735 73 61 * 4599 * * * 0 6546 0 2946 T 74 3981 * 3867 3599 6396 3406 6523 6208 4121 5858 3394 4340 * 6591 3229 3093 2412 6192 * * 74 65 * 4504 * * 854 1163 6526 0 3263 I 75 4662 6597 4762 4487 2860 5232 * 2536 6296 3526 4235 * 4767 4171 3885 5008 * 2813 * 4443 75 60 * 4613 * * 954 1048 6555 0 3037 E 76 5965 * 2754 1045 * * * * 4430 * 6638 5016 * 3215 * 4275 3708 5155 * * 76 0 * * * * 1711 526 6490 0 2971 L 77 3953 * 3526 3841 4030 * 3773 3867 4280 2303 4250 5304 5983 4160 6676 4565 4985 4507 6169 5023 77 18 * 6373 * * 1521 618 6515 0 2600 M 78 4027 4971 6371 * * 3412 * 3301 4524 1500 4511 * 4844 * 4913 4913 4166 4066 * 4580 78 90 4053 * 1840 473 987 1013 6508 2136 2356 D 79 4523 * 1373 2384 * 5348 * * 5023 * * 4420 2389 * 6197 5278 5325 5537 * * 79 32 6688 6341 0 * 954 1047 6555 1000 1529 Y 80 2852 * 2456 3214 * 5658 6605 4621 3928 5979 * 2735 6095 4624 * 3072 4847 5372 * 4798 80 22 * 6040 * * * 0 6580 0 1546 G 81 3842 * 4013 3658 * 1716 4038 6319 4710 5411 * 3410 * 5295 5504 6343 3025 4074 * 6226 81 16 6528 * 3000 193 1871 461 6601 1000 2146 G 82 3102 * 3193 5663 * 2165 6570 6434 4036 5407 * 4389 6332 5106 4159 2855 8079 3784 * 3940 82 0 * * * * 0 * 6610 0 1901 V 83 * * * * 2470 * * 4188 * 6311 * * * 4444 * * * 3233 2370 1300 83 18 * 6311 * * * * 6605 0 0 G 84 3592 * 4344 3788 4122 6444 3900 4745 3757 5427 6135 3360 * 6614 3823 4666 2479 4283 * 4002 84 16 6467 * 1000 1000 * 0 6602 1000 1000 C 85 * 125 * * * * * * 5010 * * * * * 5038 * * 5532 * * 85 16 * 6544 * * * 0 6602 0 1000 S 86 * 5653 5430 4509 4554 6686 3961 4137 3813 3093 3752 * 2030 * 4645 4212 4667 3879 * 5007 86 0 * * * * * 0 6596 0 1470 T 87 4639 6265 3207 3495 4948 * * 4318 4007 3880 4889 4050 4359 4563 3155 3559 3602 4726 * 4842 87 18 6325 * 2322 322 1000 1000 6596 1000 1470 C 88 * 0 * * * * * * * * * * * * * * * * * * 88 0 * * * * * 0 6600 0 1000 A 89 2091 5705 * 4478 * 3819 * * 3332 4686 * * 5666 * 2774 2247 3767 4570 * * 89 0 * * * * 0 * 6330 0 1000 C 90 4039 2339 * 4102 3813 4446 * 5596 3616 * * 5099 3983 4268 5111 2792 3719 3824 * * 90 0 * * * * * * 6323 0 0 C 91 3979 1736 4830 * 5035 * * * 1984 4973 * 5408 * 4084 4519 3019 * 4772 * * 91 0 * * * * * * 6311 0 0 H 92 3958 * 4722 * 4994 * 1531 * 3302 * * 4951 * 3739 2771 3776 6308 3651 * * 92 84 4139 * 2807 222 * * 6156 1000 0 Q 93 4668 * 3814 2478 * 4441 * * 4093 * * 3027 3136 3144 3077 4679 4504 6051 4673 * 93 0 * * * * * * 6123 0 0 L 94 3691 4510 * 4683 * * * 3430 4105 1892 4577 * 4223 5659 3610 4416 4326 2993 * * 94 0 * * * * * * 6031 0 0 N 95 * * * 2409 * 4489 3405 * 4377 * * 1222 * 3602 4079 4198 * * * * 95 0 * * * * * * 6026 0 0 L 96 * * * * * * * 4175 * 1962 * * * * 3947 2376 * 1609 3283 * 96 0 * * * * * * 5489 0 0 N 97 * * * 3947 * 4121 * * 3169 * * 1636 * 2661 2646 2978 * * * * 97 0 * * * * * * 5489 0 0 T 98 * * * * * * * * 2609 * * * 3141 * 3606 2067 1315 * * * 98 0 * * * * * * 5065 0 0 R 99 * * * * * * * * 1896 * * 3341 * 3562 1808 2505 * * * 3537 99 0 * * * * * * 4846 0 0 G 100 3061 * * * * 432 * * * * * * * 2846 * * * * * * 100 0 * * * * * * 4529 0 0 E 101 * * * 360 * * * * * * * * * 2178 * * * * * * 101 0 * * * * * * 3233 0 0 N 102 * * 1569 1569 * * * * * * * 1617 * * * * * * * * 102 0 * * 0 * * * 2214 0 0 //