HHsearch 1.5 NAME c5yadA_ FAM FILE c5yadA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5yadA_.a3m DATE Sat Oct 6 08:30:10 2018 LENG 73 match states, 73 columns in multiple alignment FILT 12 out of 16 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 2.4 EVD 0.4235 0.8658 SEQ >ss_dssp CHHHHHHHHHHHHHHHHHHTSGGGEEEHHHHHHHHHHHHSSCCCHHHHTTCTTTEEEECCTTSCEEEECGGGC >sa_dssp EEEEEECEEBBDCACCBADEBEEBCBDBEDACEDBCEDCEDEBDCDCADEBEEBBCCDEEEEDDCABBCEECE >ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEHHHHHCCCCEEEEEECCCCEEEEECCCCC >ss_conf 9763007899999999997277566737999999997413503268730266159997369944999678899 >Consensus xxxxxsxsxlrxqvxxiLqdxPxxxlPLfKFxElxesRFxxsisVsdLyKmxDvxxIxexxgxRxVsLxpxxq >c5yadA_ GAANKSLSLLSTETXSILQDAPACCLPLFKFIDIYEKKYGHKLNVSDLYKLTDTIAIREQGNGRLVCLLPSNQ >UniRef50_UPI0000DB7BEB(268-335:1170) PREDICTED: similar to limkain b1 n=1 Tax=Apis mellifera RepID=UPI0000DB7BEB E=7e-24 s/c=1.63 id=36% cov=95% -----SPQVVRAQIVMLLQEVPGHELPLFKFREMYESRFMISISVSELYKMKDVCIITEDPGGRMVSLNPDHR >UniRef50_UPI0001A2D7C9(583-657:1374) Limkain-b1. n=1 Tax=Danio rerio RepID=UPI0001A2D7C9 E=6e-23 s/c=1.44 id=62% cov=101% GASNKSLTCLifSSEIISILQDAPANCLPLYKFTETYESRFGHKLAVGDLYRLPELVCVREQGGGRLVCLLSNTQ >UniRef50_UPI00015B5CC0(726-793:1443) PREDICTED: similar to limkain b1 n=1 Tax=Nasonia vitripennis RepID=UPI00015B5CC0 E=9e-23 s/c=1.57 id=32% cov=90% --------IIRSQIVMLLQEVPGHKLPLFKFREMYESRFLISISISELHKMKDVCVISDDPSGRMVSLNPDHR >UniRef50_UPI0001791CE1(719-787:1527) PREDICTED: similar to limkain b1 n=1 Tax=Acyrthosiphon pisum RepID=UPI0001791CE1 E=3e-21 s/c=1.48 id=40% cov=86% --------LLRSQIAYILMEVPGQRLPLFKFREMFENRFMSSVSVSDLYKMKDVCLITEEPNHRIISLNP--- >UniRef50_UPI000186DC0A(756-818:1519) conserved hypothetical protein n=1 Tax=Pediculus humanus corporis RepID=UPI000186DC0A E=1e-12 s/c=1.18 id=25% cov=88% ----------RSQVAQLLSEIPQNKTPLFRFTELFKSRFLNSVSVSELNKMKDVCVITEEDGGRMITANTRSQ >UniRef50_Q7Q3D5(260-323:1053) AGAP007823-PA (Fragment) n=8 Tax=cellular organisms RepID=Q7Q3D5_ANOGA E=2e-08 s/c=0.94 id=28% cov=88% -------SALRCQVAGLLKDVPFCSLPINRFRELFQSRFKSSISVLDLYRMQDVCVIALDKNeEKHISLQP--- >UniRef50_Q4SVS4(345-380:1130) Chromosome undetermined SCAF13729, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SVS4_TETNG E=7e-05 s/c=1.35 id=54% cov=51% -------------------------------------RYSRKLAVAELYRLPEVVAVREQGGSRLVCLLPGSQ >UniRef50_Q7KWG9(341-403:1305) CG17018, isoform D n=12 Tax=Sophophora RepID=Q7KWG9_DROME E=5e-17 s/c=1.40 id=29% cov=85% ---------LRCQVAGLLKDVPFNTLPMYKFRELFQSRFKTSISVLDLYKMQDICTINSDNNeEKFISLNP--- >UniRef50_UPI0001758720(479-545:1280) PREDICTED: similar to limkain b1 n=1 Tax=Tribolium castaneum RepID=UPI0001758720 E=7e-15 s/c=1.22 id=35% cov=82% ---------LRAMVISILQEAPDNNMPLFKFMELLESRFHCTVSVSEVNKLKDIIKISDNLGSRIISF----- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 1313 0 0 A 2 0 * * * * * * * * * * * * * * * * * * * 2 0 * * * * * * 1313 0 0 A 3 685 * * * * * * * * * * * * * * 1404 * * * * 3 0 * * * * * * 1313 0 0 N 4 * * * * * * * * * * * 541 * * * 1677 * * * * 4 0 * * * * * * 1313 0 0 K 5 * * * * * * * * 0 * * * * * * * * * * * 5 0 * * * * * * 1313 0 0 S 6 * * * * * * * * * * * * * * * 0 * * * * 6 0 * * * * * * 1740 0 0 L 7 * * * * * * * * * 593 * * 1569 * * * * * * * 7 0 * * * * * * 1740 0 0 S 8 * * * * * * * * * * * * * 2159 * 789 2342 * * * 8 0 * * * * * * 2045 0 0 L 9 2375 2649 * * * * * 2836 * 1359 * * * * * * * 3085 * * 9 0 * * * * * * 2170 0 0 L 10 * * * * * * * 3260 * 306 * * * * * * * 3530 * * 10 187 3040 * 1000 1000 * * 2382 1000 0 S 11 * * * * * * * * * * * * * * 536 1687 * * * * 11 0 * * * * * * 2448 0 0 T 12 1776 2277 * * * * * * * * * * * * * 1312 3338 * * * 12 0 * * * * * * 2448 0 0 E 13 * * * 1687 * * * * * * 3028 * * 819 * * * * * * 13 0 * * * * * * 2448 0 0 T 14 * * * * * * * 1441 * * * * * * * * 2372 1189 * * 14 0 * * * * * * 2448 0 0 X 15 1244 * * * * * * 1888 * * 2846 * * * * * * 2569 * * 15 0 * * * * * * 2440 0 0 S 16 * * * * * 2277 * * * * 2599 * * 3188 * 1207 * * * 3542 16 0 * * * * * * 2448 0 0 I 17 * * * * * * * 1236 * 1056 * * * * * * * 3406 * * 17 0 * * * * * * 2448 0 0 L 18 * * * * * * * * * 0 * * * * * * * * * * 18 0 * * * * * * 2448 0 0 Q 19 * * * * * * * * 2277 * 3542 * * 741 * 3188 * * * * 19 0 * * * * * * 2448 0 0 D 20 * * 952 1049 * * * * * * * * * * * * * * * * 20 0 * * * * * * 2448 0 0 A 21 1207 * * * * * * 3188 * * * * * * * * * 1129 * * 21 0 * * * * * * 2448 0 0 P 22 * * * * * * * * * * * * 0 * * * * * * * 22 0 * * * * * * 2448 0 0 A 23 1687 * 3028 * 2277 1995 * * * * * * * 3188 * * * * * * 23 0 * * * * * * 2448 0 0 C 24 * 1732 * * * * 2599 * * * * 1158 * 3542 * * * * * * 24 0 * * * * * * 2448 0 0 C 25 * 1687 * 3736 * * * * 2324 * * 3028 * * 3542 3213 3345 * * * 25 0 * * * * * * 2448 0 0 L 26 * * * * * * * * * 381 3028 * * * * * 3188 * * * 26 0 * * * * * * 2448 0 0 P 27 * * * * * * * * * * * * 0 * * * * * * * 27 0 * * * * * * 2448 0 0 L 28 * * * * * * * 3213 * 333 3345 * * * * * * * * * 28 0 * * * * * * 2448 0 0 F 29 * * * * 564 * * * * * * 3213 * * * * * * * 2213 29 0 * * * * * * 2448 0 0 K 30 * * * * * * * * 354 * * * * * 2200 * * * * * 30 0 * * * * * * 2448 0 0 F 31 * * * * 0 * * * * * * * * * * * * * * * 31 0 * * * * * * 2448 0 0 I 32 * * * * * * * 3338 * * 3028 * * * 1129 * 1638 * * * 32 0 * * * * * * 2448 0 0 D 33 * * 2372 310 * * * * * * * * * * * * * * * * 33 0 * * * * * * 2448 0 0 I 34 * * * * * * * 2372 * 1189 1995 * * * * * 3092 * * * 34 0 * * * * * * 2448 0 0 Y 35 * * * * 1315 * * * * 3028 * * * * * * * * * 1072 35 0 * * * * * * 2448 0 0 E 36 * * * 548 * * * * 3188 * * * * 2277 * * * * * * 36 0 * * * * * * 2448 0 0 K 37 * * * * * * * * 2372 * * 3542 * * * 472 * * * * 37 0 * * * * * * 2448 0 0 K 38 * * * * * * * * 2877 * * * * * 211 * * * * * 38 0 * * * * * * 2646 0 0 Y 39 * * * * 364 * * * * * * * * * * * * * * 2166 39 0 * * * * * * 2646 0 0 G 40 * * * * * 2128 3084 * 2365 2473 2976 * * * * 2719 * * * * 40 0 * * * * * * 2646 0 0 H 41 * 3084 * * * * 2128 2799 * * * 3398 * * 2719 2577 3393 * * * 41 0 * * * * * * 2646 0 0 K 42 * * * * * * * * 1393 * * * * * * 996 3084 * * * 42 0 * * * * * * 2646 0 0 L 43 * * * * * * * 1566 * 1393 * * * * * * * 1829 * * 43 0 * * * * * * 2646 0 0 N 44 2556 * * * * * * * * * * 2877 * * * 691 * 3745 * * 44 0 * * * * * * 2646 0 0 V 45 * * * * * * * 3551 * * * * * * * * * 129 * * 45 0 * * * * * * 2646 0 0 S 46 2719 * * * * 3431 * * * 2365 * * * * * 833 * * * * 46 0 * * * * * * 2646 0 0 D 47 * * 820 1205 * * * * * * * * * * * * * * * * 47 0 * * * * * * 2646 0 0 L 48 * * * * * * * * * 181 * * * * * * * 3084 * * 48 0 * * * * * * 2646 0 0 Y 49 * * * * * * 2645 * * * * 2232 * * * * * * * 673 49 0 * * * * * * 2646 0 0 K 50 * * * * * * * * 452 * * * * * 1895 * * * * * 50 0 * * * * * * 2646 0 0 L 51 * * * * * * * * * 1004 996 * * * * * * * * * 51 0 * * * * * * 2646 0 0 T 52 * * * * * * * * 1234 * * * 2031 2365 * * 2877 * * * 52 0 * * * * * * 2646 0 0 D 53 * * 269 2556 * * * * * * * * * * * * * * * * 53 0 * * * * * * 2646 0 0 T 54 * * * * * * * 2230 * 3431 * * * * * * 2877 842 * * 54 0 * * * * * * 2646 0 0 I 55 * 996 * * * * * 2404 * * * * * * * * * 1691 * * 55 0 * * * * * * 2646 0 0 A 56 1796 3431 * * * * * 4099 3084 3863 * * * * * * 3393 1841 * * 56 0 * * * * * * 2646 0 0 I 57 * * * * * * * 405 * * * * * * * * * 2031 * * 57 0 * * * * * * 2646 0 0 R 58 3338 * * * * * * * * * * 3393 * * 1393 2299 2172 * * * 58 0 * * * * * * 2646 0 0 E 59 * * 2299 731 * * * * * 3338 * * * * * 3393 * * * * 59 0 * * * * * * 2646 0 0 Q 60 * * 1566 2612 * * * * * * * 3084 * 1393 * * * * * * 60 0 * * * * * * 2646 0 0 G 61 * * 3398 * * 1393 * * 3338 3084 * 3393 2235 * * * * * * * 61 0 * * * * * * 2646 0 0 N 62 * * * * * 955 * * * * * 1326 * * * 3551 * * * * 62 311 2365 * 0 * * * 2646 1172 0 G 63 * * * 2365 * 1097 3863 * * * * * * * * 1890 * * * * 63 0 * * * * * * 2646 0 0 R 64 * * * * * * * * 2365 * * * * * 311 * * * * * 64 0 * * * * * * 2646 0 0 L 65 * * * * 3393 * 3338 2421 * 1393 2068 * * * * * * * * * 65 0 * * * * * * 2646 0 0 V 66 * * * * * * * 1072 * * * * * * * * * 931 * * 66 0 * * * * * * 2646 0 0 C 67 * 1393 * * * * * * * * * * * * * 931 3398 * * * 67 0 * * * * * * 2646 0 0 L 68 3398 * * * 3084 * * * * 345 * * * * * * * * * * 68 0 * * * * * * 2646 0 0 L 69 * * * * * * * * * 1252 * 1078 * 3231 * * * * * * 69 0 * * * * * * 2477 0 0 P 70 * * * * * * * * * * * * 350 * * 3334 3102 * * * 70 0 * * * * * * 2477 0 0 S 71 * * 1850 * * 2241 * * * * * 2928 * * 2529 2275 * * * * 71 0 * * * * * * 2212 0 0 N 72 * * * * * * 1850 * * * * 3181 * * * 1056 2928 * * * 72 0 * * * * * * 2212 0 0 Q 73 * * * * * * * * * * * * * 469 1850 * * * * * 73 0 * * 0 * * * 2212 0 0 //