HHsearch 1.5 NAME c5xxua_ FAM FILE c5xxua_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5xxua_.a3m DATE Sat Sep 2 08:24:34 2017 LENG 99 match states, 99 columns in multiple alignment FILT 29 out of 33 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 3.4 EVD 0.4510 1.3951 SEQ >ss_dssp CCSCSSCSSCCCSCSCCCEEECSSSCCEEESTTSCEEEEEECTTCSSTTHHHHHHCSSSSCCCCCEEEEEECCSHHHHHHTSSCCCCTTGGGCCSCSCC >sa_dssp EEEDEDEDCDCEEEEECEECEBDEDDEDBCDCDACDDEDDECECEEEDDEEDEEEDEEEEEECDEDECDCBCBDDBADEEEDDEEDDEEECEDEEEEEE >ss_pred CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEEEECCEEEECCHHHHHHCCCCCC >ss_conf 974113575667877300155342238064420012442105646678865763005155311303211145565432124121011333221067899 >Consensus pkKRrNxGRxKxxrGhvxxvxCxncgxxvPkDKAIkrfxirniVeaaaxrDlxxaxvxxxyxlPKlYxkxxYCVSCAIhxxiVRvRsxexRkxrxppxr >c5xxua_ PTKRRNGGRAKHGRGHSAVVRCSNCGRSCPKDKAIKRFNVRNIVDASSQRDLREASVYNTYTLPKLYIKQCYCVSCAIHSRVVRVRSVEQRKVRENPQR >UniRef50_Q8SRN2(2-99:105) 40S ribosomal protein S26 n=2 Tax=Apansporoblastina RepID=RS26_ENCCU E=2e-19 s/c=0.99 id=45% cov=98% ---RRNHGRGKKNRGSAGSIQCDKCGSVTPKDKAIKRFRIQSLIEQASFDDLKQATIYDVFEVPRMGYKSQFCVSCACHAKIVRVRSSQARKIRYgfNPN R >UniRef50_Q9AW37(3-95:98) 40S ribosomal protein S26 n=2 Tax=Cryptophyta RepID=Q9AW37_GUITH E=1e-24 s/c=1.22 id=50% cov=95% -KKRRNNGRSKKNRGLVRRIHCNLTGKLVPKDKAIVRYVIKNIVDLSSLRDLQDSCIYEYYTMPKLYYKNTFSIESAIHNRIVRVRSKADRKKR----- >UniRef50_UPI00001CB188(12-97:107) UPI00001CB188 related cluster n=1 Tax=Rattus norvegicus RepID=UPI00001CB188 E=4e-23 s/c=1.26 id=47% cov=88% ---------AKKGCGHVQPVPCRSSAWCLPKDKAIK-FIIQNILEAAAVRDIDKANVFKAYMLPMLYVKLHYCVSCAIHSEVVRNHLLKLRRTEHP--- >UniRef50_A8MBM8(6-100:152) Ribosomal protein S26E n=11 Tax=Thermoprotei RepID=A8MBM8_CALMQ E=8e-23 s/c=1.14 id=33% cov=97% PKKRKNRGRHKGDKGKESIVYCDNCGKMIPRSKAVRVTVPYSPIPTDLAKELEKQGAI----VPRYYITKTYCVNCAIYLGIIKVRSEDERKSKKPILR >UniRef50_B1L663(3-96:113) Ribosomal protein S26E n=6 Tax=Archaea RepID=B1L663_KORCO E=7e-22 s/c=1.12 id=40% cov=96% -KKRKNRGRKLGGSGHERTVQCSQCGRVIPADKAVKVTRWTSPVGGSLGKDLERQGAYISKRLETRY----YCVSCAVYLGIVRPRAEEERKEALPINK >UniRef50_Q3LVZ2(3-94:98) Ribosomal protein S26 n=1 Tax=Bigelowiella natans RepID=Q3LVZ2_BIGNA E=2e-19 s/c=1.05 id=32% cov=94% -KKRRNNGRSKNNRGHVNRIHCMSSNALVPRDKAIKKLNVKSLFFPNILKDTPNVFVLPGYKAPKLYSYVFYSISSAFSQKFIKPGRKKYRRI------ >UniRef50_UPI0000DA2056(34-90:682) PREDICTED: similar to Ankyrin repeat domain protein 11 (Ankyrin repeat-containing cofactor 1) n=2 Tax=Rattus norvegicus RepID=UPI0000DA2056 E=4e-10 s/c=1.15 id=45% cov=59% -------------RSYVRPIGYMNCVQYMPKDKASKKFVTRNIVEAAAVRDIAEANVLDANVLPKFYIKL----------------------------- >UniRef50_Q84TX1(35-99:108) Putative ribosomal protein n=2 Tax=Oryza sativa Japonica Group RepID=Q84TX1_ORYSJ E=3e-06 s/c=0.82 id=49% cov=66% -------------------------------DKAINRFLVRNIVEQAAVLRYARGLCH---VLPKLYAKVHHCVSwNAIHAHIVSVRSCENRRNCELPQ- >UniRef50_C9SGA9(3-72:162) 40S ribosomal protein S26E n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SGA9_VERA1 E=2e-19 s/c=1.38 id=55% cov=72% -KKRKNNGRNKKGRGHVKPIRCSNCSRCTPKDKAIKRFTIRNMVESAAIRDISDASVFAEYTVPKMYLKLQ---------------------------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * P 1 * * * * * * * * * * * * 0 * * * * * * * 1 0 * * * * * * 2308 0 0 T 2 * * * * * * * * 547 * * * * * * 3260 2675 4195 * * 2 0 * * * * * * 2957 0 0 K 3 * * * * * * * * 0 * * * * * * * * * * * 3 0 * * * * * * 2806 0 0 R 4 * * * * * * * * * * * * * * 0 * * * * * 4 0 * * * * * * 2884 0 0 R 5 3849 * * 3681 * * * * 2407 * * * * * 591 * * * * * 5 0 * * * * * * 2881 0 0 N 6 4401 * * * * * * * * * * 129 * * * 4701 * * * * 6 0 * * * * * * 2881 0 0 G 7 * * * * * 2477 2527 * * * * 1295 * * 2062 * * * * * 7 0 * * * * * * 2881 0 0 G 8 * * * * * 0 * * * * * * * * * * * * * * 8 0 * * * * * * 2881 0 0 R 9 * * * * * * * * * * * * * * 0 * * * * * 9 0 * * * * * * 2881 0 0 A 10 3311 * * * * 4006 3704 * 3661 * * 1983 * * 3727 1504 * * * * 10 0 * * * * * * 2915 0 0 K 11 * * * * * * * * 119 3661 * * * * * * * * * * 11 143 3408 * 1000 1000 * * 2915 1419 0 H 12 * * * * * 1856 2184 * 1521 * 4627 3120 * * * * * * * * 12 0 * * * * * * 2915 0 0 G 13 3851 * 2496 * * 1347 * * * * * 1680 * * * 4376 * * * * 13 0 * * * * * * 2983 0 0 R 14 * 4400 * * * * * * 2165 * * * * * 617 3685 * * * * 14 0 * * * * * * 3450 0 0 G 15 * * * * * 90 * * * * * * * * * 4045 * * * * 15 0 * * * * * * 3450 0 0 H 16 * * * * * * 613 * 4112 4377 * * * * 3065 4056 * * * 4045 16 13 * 6784 * * * * 3450 0 0 S 17 3239 * * 2416 * * * * * * * * * * * 5051 3683 740 * * 17 0 * * * * * 0 3231 0 1000 A 18 5147 * 4530 * * 3026 * * 2103 * * 3167 4170 3255 2028 4153 * * * * 18 0 * * * * * 0 3227 0 1000 V 19 * * * * 5359 * * 4153 * * * 4705 1679 * 2486 4049 2694 5147 * 2764 19 0 * * * * * 0 3227 0 1000 V 20 * * * * * * * 1246 * 5200 * * * * * * * 860 * * 20 0 * * * * * 0 3227 0 1000 R 21 * * * * 4705 4207 2427 * * * 4004 4732 4488 2900 1594 * * * * 3161 21 0 * * * * * 0 3227 0 1000 C 22 * 80 * * * * * * * * * * * * * * * * * 4207 22 0 * * * * * 0 3227 0 1000 S 23 * * 2092 4705 4447 * * * * * 2507 4159 * * 4488 1777 3559 5149 * * 23 0 * * * * * 0 3227 0 1000 N 24 4705 * * * * * 4705 * 4049 4159 * 726 * 3765 * 2958 * * * * 24 0 * * * * * 0 3227 0 1000 C 25 * 364 * * * * * * * * * * * * * 2581 4159 * * * 25 0 * * * * * 0 3227 0 1000 G 26 2832 * * * * 575 * * * * * 3571 * * * 4320 * 4207 * * 26 0 * * * * * 0 3227 0 1000 R 27 2771 * * * * * * * 2002 * * * * 4207 1299 3340 * * 4488 * 27 0 * * * * * 0 3227 0 1000 S 28 * 1987 * * * * * * * 2427 3402 * * 4732 4004 3640 * 2102 * 4207 28 0 * * * * * 0 3227 0 1000 C 29 * 3611 * * * * * 2662 * 4488 4207 * * * * * 2707 976 * * 29 0 * * * * * 0 3227 0 1000 P 30 * * * * * * * * * * * * 64 * * 4530 * * * * 30 0 * * * * * 0 3227 0 1000 K 31 3765 * * 4004 * * * * 582 * * * * * 2352 * * * * * 31 0 * * * * * 0 3227 0 1000 D 32 * * 168 * * * * * * * * * * * * 3184 * * * * 32 0 * * * * * 0 3275 0 1000 K 33 * * * * * * * * 0 * * * * * * * * * * * 33 0 * * * * * 0 3275 0 1000 A 34 0 * * * * * * * * * * * * * * * * * * * 34 0 * * * * * 0 3275 0 1000 I 35 * * * * * * * 556 * * * * * * * 4160 * 1923 * * 35 0 * * * * * 0 3279 0 1000 K 36 * 4081 * * * 4462 * * 609 * * 4632 * * 3184 * 4877 4174 * * 36 65 * 4503 * * 0 * 3275 0 1000 R 37 * * * * * * * * 2268 4176 * * * * 877 * * 2378 * * 37 0 * * * * 0 * 3445 0 1000 F 38 * * * * 792 * * * * 3714 5158 * * * * * 2068 * * 3650 38 0 * * * * * * 3494 0 0 N 39 3995 * * * * * * 4413 * 3465 * 2722 * 3339 2411 * 4432 1666 * * 39 0 * * * * * * 3494 0 0 V 40 * * * * * * * 1433 * * * * 3210 4454 * * 3003 1822 3873 * 40 0 * * * * * * 3494 0 0 R 41 * * * * * * * * 2392 * * * * 3257 1100 * 3873 * * 2555 41 0 * * * * * * 3494 0 0 N 42 * * * * * * * * * * * 765 * * 4676 1425 * * * * 42 0 * * * * * * 3494 0 0 I 43 * * * * * * * 1142 * 2883 2549 * 2056 * * * * * * * 43 0 * * * * * * 3499 0 0 V 44 * * * * 3703 * * 3140 * 3503 * * * * * * * 471 * * 44 0 * * * * * * 3499 0 0 D 45 * * 1768 1147 3703 3860 * * * * * * 3197 * * * * * * * 45 0 * * * * * * 3499 0 0 A 46 1130 * * * * 3873 * * * 4387 * * 2945 2855 * 3685 3621 * * * 46 0 * * * * * * 3494 0 0 S 47 1096 * 3210 * * * * * * * * 3714 * * * 1583 6144 * * * 47 0 * * * * * * 3494 0 0 S 48 1280 * * * * * * 3714 * 2068 * * * * * 1870 * * * * 48 0 * * * * * * 3494 0 0 Q 49 1946 * * * 4083 3798 * 3413 4663 2814 * * * 3956 * * * 1892 * * 49 0 * * * * * * 3663 0 0 R 50 * * 4083 * * * * * 2012 4247 * 3898 * * 803 * * * * * 50 0 * * * * * * 3663 0 0 D 51 * * 386 2459 * * * * * * * * * * 4247 * * * * * 51 0 * * * * * * 3663 0 0 L 52 * * * * * * * 1674 * 1228 * * * * * * 3524 3055 * 4247 52 0 * * * * * * 3663 0 0 R 53 2906 * 4761 1979 * * * * 3297 * * 6158 3524 2762 5523 2427 5779 * * * 53 0 * * * * * * 3663 0 0 E 54 * * 2646 1511 * * * * 2193 * * 3524 * 4083 3005 * * * * * 54 0 * * * * * * 3663 0 0 A 55 1086 * * * * 4247 * * 3898 * * 3836 * 2421 * 3934 * 3524 * * 55 0 * * * * * * 3663 0 0 S 56 * 2615 * * 3524 1979 * * * 4247 * 3753 * * 5633 1996 4083 * * 4663 56 64 4525 * 0 * * * 3663 1000 0 V 57 1499 4247 * * * * * 2893 * * * * * * * * * 1124 * * 57 0 * * * * * * 3663 0 0 Y 58 * * * * 2787 * 3762 2459 * 2692 * * * * * * * * * 1169 58 348 4663 2518 1000 1000 * * 3663 1000 0 N 59 4262 * 2025 4517 * 4520 * 2226 4597 * * 4135 2748 4795 * 3429 5302 * * * 59 0 * * * * * 0 3930 0 1971 T 60 2850 * 4629 3560 * 2367 * * 4550 * * * * * * 1878 3413 3708 * 4132 60 246 4374 3202 0 * * 0 3451 1000 1971 Y 61 * * * * 1973 * * * 3071 * * 4964 * * * * * * * 751 61 0 * * * * 1469 646 3207 0 2008 T 62 5186 * * 3077 * * * * 2638 * 4640 5341 4293 4592 3134 5249 2559 2145 * * 62 0 * * * * 578 1598 3281 0 1430 L 63 3239 * * * * * * 3761 * 976 2867 * * * * * * 2516 * * 63 0 * * * * * 0 3576 0 1000 P 64 * * * 3719 * * * * * * * * 234 * * * 3761 * * * 64 0 * * * * 0 * 3576 0 1000 K 65 * * * * * * * * 587 * 4860 * * * 2121 * 3842 * * * 65 0 * * * * * * 3618 0 0 L 66 * * * * 5340 * * 4769 * 995 3251 * * * 3842 * 3399 * * 2580 66 0 * * * * * * 3618 0 0 Y 67 * * * * * 3995 * * * 4089 * * 4034 * * * * * * 291 67 104 * 3842 * * * * 3618 0 0 I 68 2849 * * * * * * 2784 * 4435 3470 5217 * 4895 5033 3247 * 1942 * 3025 68 0 * * * * * 0 3491 0 1000 K 69 * * * * * * * * 511 * * * * * * * 2367 * * 3260 69 0 * * * * * 0 3492 0 1000 Q 70 * * * * * * * * 2367 1724 5550 4202 * 2782 * 3917 * 2210 * * 70 0 * * * * * 0 3492 0 1000 C 71 6382 2752 * 4602 3229 * 2087 * * * * * * 2959 4263 4678 2485 * * 4108 71 0 * * * * 0 * 3472 0 1000 Y 72 * * * * 2658 * 3688 * * * * * * * * * * * * 388 72 0 * * * * * * 3541 0 0 C 73 * 237 * * * * * * * * * * * * * 2725 * * * * 73 0 * * * * * * 3541 0 0 V 74 * * * * * * * 1706 * * * * * * * * * 528 * * 74 0 * * * * * * 3541 0 0 S 75 4255 * * 4296 * * * * * * * 2524 * * * 468 * * * * 75 84 4143 * 0 * * * 3545 1000 0 C 76 5192 386 * * * * * * * * * 4152 * * * 2725 * * * * 76 0 * * * * * * 3541 0 0 A 77 56 * * * * 4708 * * * * * * * * * * * * * * 77 0 * * * * * * 3541 0 0 I 78 * 4114 * * 3300 * * 673 * * * * * * * * * 2228 * * 78 0 * * * * * * 3541 0 0 H 79 * * * * 4166 * 458 * * * * * * * * 3300 * * * 3123 79 0 * * * * * * 3541 0 0 S 80 2303 * * * 3018 3842 * * * 3045 * 4291 * 3310 * 1595 * * * * 80 0 * * * * * * 3515 0 0 R 81 * * * 4216 * 2031 3264 * 1627 * * * * * 1869 * * * * * 81 0 * * * * * * 3515 0 0 V 82 * * * * 3001 * * 1117 * 3882 * * * * * * 4273 1764 * * 82 0 * * * * * * 3515 0 0 V 83 * * * * * * * 1845 * * * * * * * * * 471 * * 83 0 * * * * * * 3519 0 0 R 84 * * * * * * * * 1857 * * * * * 589 4084 * * * * 84 0 * * * * * * 3515 0 0 V 85 4273 * * * * * * 3882 * * * 2786 2555 * * * * 823 * * 85 0 * * * * * * 3515 0 0 R 86 * * * * * 3324 4178 * * * * * * * 243 * * * * * 86 0 * * * * * * 3571 0 0 S 87 2873 * * * * * * * * 4178 * * 3197 * 3324 739 * * * * 87 0 * * * * * * 3571 0 0 V 88 * 3947 * 2406 * * * * 2405 4178 * * * * 2054 4078 5453 2477 * * 88 0 * * * * * * 3571 0 0 E 89 4301 * 4263 1128 * 4254 * * 2371 * * 3894 * 4078 * * 3891 * * * 89 0 * * * * * * 3571 0 0 Q 90 2581 * 2178 2028 * 4453 * * * 4178 * 3092 * 4365 * * * * * 3324 90 0 * * * * * * 3571 0 0 R 91 * * * * * * 4931 * * * * * * * 48 * * * * * 91 0 * * * * * * 3571 0 0 K 92 * * * * * * * * 898 * * * * * 1110 * * * * * 92 0 * * * * * * 3571 0 0 V 93 * * 4168 3851 * * 4752 1727 2895 * * 2487 * * * 3067 4178 4365 * * 93 0 * * * * * * 3571 0 0 R 94 3716 3865 * 4016 * * * * 4077 * * * * * 446 * * * * * 94 0 * * * * * * 3281 0 0 E 95 2644 * 4974 2864 * * 3984 * 3437 2941 * * * * * * 2847 3866 * 2494 95 140 3437 * 1000 1000 * * 3201 1000 0 N 96 * * * * * * 4348 * * 3431 * 2920 462 * * * * * * * 96 0 * * * * * * 2968 0 0 P 97 * * * * * * * 2467 * 3400 * * 574 * * * * 4252 * * 97 0 * * * * * * 2874 0 0 Q 98 * * * * * * * * 2688 2929 * 2386 2968 1465 4965 * * * * * 98 0 * * * * * * 2874 0 0 R 99 * * * * * * * * 3110 * * * * 2657 463 * * * * * 99 0 * * 0 * * * 2554 0 0 //