HHsearch 1.5 NAME c5xdhD_ FAM FILE c5xdhD_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5xdhD_.a3m DATE Sat Mar 31 08:20:36 2018 LENG 85 match states, 85 columns in multiple alignment FILT 104 out of 1689 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 8.8 EVD 0.3697 -2.3009 SEQ >ss_dssp CHHHHHHHHHTHHHHCTTSSCCHHHHHHTCCCTTCHHHHHTSCHHHHHHHHHHCCSCCCCCGGGGTCCGGGHHHHHHHHHTTTTC >sa_dssp EECEECBEECCCECCBEDACBCECAEEEECCDBBCDECBEDCDEEDBDDCBCECEEDEEEDCDEDEBEDECAEDBBECBCDBDEE >ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCC >ss_conf 9189999975567417899886533234554444420001464024467653011000000001478899999999999851389 >Consensus xxgxxiyxxxCaxCHgxxgxGxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxMpxxxxxLsxxeIxxlvxYIrxlxxk >c5xdhD_ GDIQKTYKDTCELCHGADGKGSEAGKQFGVPDFTSPDYQKSRTDAQMKESMTNGTKNPNVKLSDLGVDLADLDPLVQLVRGFNGK >UniRef50_A6DJ39(47-133:903) Putative uncharacterized protein n=2 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DJ39_9BACT E=5e-05 s/c=0.56 id=12% cov=95% ADIKPIFDKHCIKCHGEkkqksDLRLDSRANILKGGDLGEPAASPGHPEkSTIIEFISlDPDDDEIMPPKGDPLTKEQIALISRWIK----- >UniRef50_A6T194(185-271:271) Cytochrome c family protein n=2 Tax=Oxalobacteraceae RepID=A6T194_JANMA E=2e-06 s/c=0.61 id=17% cov=89% -----VYATQCASCHQVNGGGDAAvGPDLNRPANPTEYFHDVYLRKYLRDpaAVRSWPGMTMPGFADNVMSESQMDDLLAYLR----- >UniRef50_UPI0001698589(15-95:95) Cytochrome c, class I n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698589 E=0.001 s/c=0.55 id=13% cov=45% ---------------------------------------------DIKSGKRNNGQTAAMKGIMATVSEAEAREIANWLSSL--- >UniRef50_B1FX42(81-167:195) Cytochrome c family protein n=1 Tax=Burkholderia graminis C4D1M RepID=B1FX42_9BURK E=6e-05 s/c=0.56 id=17% cov=98% ---ARMYDANCATCHGAPDSPlSAVGQGIQPAAPSLLAAQRRNKPELMFWVIKHGVNMTAMPSFGKTQSDQTLWQVAAFIyaeRGVSKE >UniRef50_Q2RP21(205-289:291) Cytochrome c oxidase cbb3-type, subunit III n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RP21_RHORT E=7e-06 s/c=0.61 id=15% cov=100% GHGQQLFEENCAVCHASESSGpVPDGNQAMGAPALNNQIWLYKGDKESILAQLRAPKQGMMPGWANRLKDSDIKSATVYVHSLGG- >UniRef50_A3ZTF9(115-206:443) PbrT protein-putative c-type cytochrome-like protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZTF9_9PLAN E=1e-05 s/c=0.56 id=18% cov=99% GKQRGLYRQHCVHCHGITGDGAGPTAAFLNPYPRDyrpgkfkfkSTASGQEPTHQDLNRIIRDGAAGTAMPSFKLLDSDEIEALTHYVKYLS-- >UniRef50_A3XP82(50-129:151) Major anaerobically induced transmembrane protein n=1 Tax=Leeuwenhoekiella blandensis MED217 RepID=A3XP82_9FLAO E=0.0002 s/c=0.58 id=15% cov=40% ----------------------------------------------LKGPITVNGTDYNSVMAPLGLYDDEVADVMNYI------ >UniRef50_C9PQ97(28-102:102) Putative uncharacterized protein n=1 Tax=Pasteurella dagmatis ATCC 43325 RepID=C9PQ97_9PAST E=0.0001 s/c=0.63 id=15% cov=87% ---QKLFKQSCSFCHGNNAEKSALNQSKILNQLPASEIVNSLKARKEGQIVGAGNAAK------SRLSPEDMQAIADFIQTL--- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 1245 * * * * 791 * * * * * * * * * * * * * * 1 0 * * * * * * 5167 0 0 D 2 * * 1280 1360 * * 4522 * 4560 * * * 4757 3721 * * * * * * 2 0 * * * * * * 6591 0 0 I 3 3271 4543 * * * 704 * 3087 * * * * * 4665 * 4696 * 4513 * * 3 0 * * * * * * 6782 0 0 Q 4 2406 * * 3607 * * * * 1629 * 5653 * * 2312 2780 4675 * * * * 4 0 * * * * * * 8571 0 0 K 5 3605 * 3836 2834 6198 5403 5163 5352 2154 * * * 4524 2745 2898 5421 5499 5576 * * 5 0 * * * * * * 8625 0 0 T 6 4419 * * * * * 6228 1868 4555 1676 5347 6504 * * * * 3899 2267 * * 6 0 * * * * * * 8763 0 0 Y 7 * * * * 1268 * * * * 6018 * * * * * * * * 6179 848 7 0 * * * * * * 8775 0 0 K 8 3661 * 3650 2376 6525 3780 * 6213 2897 4401 4871 3542 * 3149 4545 4602 4235 * * * 8 0 * * * * * * 8782 0 0 D 9 2941 * 3941 2923 6762 * * 3810 3147 6246 6312 4860 * 2444 4114 4621 3396 4571 * * 9 19 6223 * 0 * * * 8778 1000 0 T 10 5653 * * * 5423 6527 2299 * 4012 4560 * 2548 * 4302 3204 3519 4986 4900 * 2682 10 0 * * * * * * 8781 0 0 C 11 * 0 * * * * * * * * * * * * * * * * * * 11 0 * * * * * * 8906 0 0 E 12 1226 * * 6512 4932 5334 * 3486 5364 5493 5287 * * 4672 5656 3351 5557 3442 5581 4284 12 0 * * * * * * 8906 0 0 L 13 2308 * * 6234 5151 2618 4881 6678 4474 4231 5650 5547 4956 4378 * 2492 3978 3873 * 5598 13 0 * * * * * * 8906 0 0 C 14 * 0 * * * * * * * * * * * * * * * * * * 14 0 * * * * * * 8906 0 0 H 15 * * * * * * 0 * * * * * * * * * * * * * 15 15 6601 * 1000 1000 * * 8906 1000 0 G 16 4256 * * 6294 * 627 5581 * 6623 5903 5651 5467 6560 3685 6364 4032 6290 6215 * 6726 16 42 5752 6588 1000 1000 * * 8906 1642 0 A 17 2984 * 4989 3626 5656 4369 * 3722 4177 3206 5063 3876 3775 5566 5797 4118 4993 2872 * 5811 17 28 6481 7007 2322 322 * 0 8898 1000 1000 D 18 4164 * 1692 4031 * 3454 * 6533 3532 5552 6490 2788 5460 * * 3358 4268 5452 * 6276 18 0 * * * * * 0 8899 0 1720 G 19 2641 * 5555 * * 618 * * 6751 4939 6097 6533 6304 * 3927 5555 * * * * 19 44 5646 6591 2460 289 * 0 8899 1686 1720 K 20 3563 * 3342 3693 * 5673 5167 4931 2288 * 6310 3571 * 3110 3086 3638 * 4934 * 6490 20 32 5493 * 2452 291 1571 592 8896 1751 2210 G 21 4404 * 6306 * * 405 * 5155 5186 6474 * 6412 4723 * 6615 5231 * 4974 * * 21 109 3964 6818 1406 684 981 1019 8903 3737 1662 S 22 3247 * 2536 4021 5568 3878 * 4200 3881 5717 6472 3749 6550 4412 4256 3774 3172 4304 * * 22 62 4894 6833 922 1083 * 0 8898 2265 1599 E 23 3636 * 3671 3713 * 1694 5582 * 4134 4495 * 4919 3504 * 4179 4237 4063 4877 * 6605 23 96 4174 6848 1792 492 1493 633 8892 3430 2116 A 24 3239 * 4327 5479 6392 2958 * 4206 4756 3261 4549 4518 2630 6195 3862 5008 5654 3422 * 6465 24 56 5177 6612 1432 668 * 0 8888 2309 2221 G 25 2491 * 6591 5466 * 1471 5459 4537 * 3497 4881 4802 4449 5673 * 5002 5853 3860 5537 * 25 91 5186 4904 3838 105 * 0 8882 2107 2740 K 26 2431 * * 5275 5008 3287 * 4847 3085 3418 * 4430 2530 5320 4498 5007 4401 5156 * 6184 26 74 4684 6504 2534 273 * 0 8834 2775 3807 Q 27 3157 * 4029 5433 5373 4277 * 4128 3915 4141 6084 3767 2862 4945 4126 3629 3707 4642 6408 5448 27 119 4197 5359 2338 318 1975 423 8819 2937 3932 F 28 3333 * 5993 3768 4236 3953 * 4489 5336 2000 5602 4814 2924 5268 3785 6682 6491 4960 * 4816 28 50 5499 6382 2214 350 1288 760 8787 1744 4156 G 29 4014 * 5222 * 5510 2457 5718 3930 3342 2756 3597 4508 3516 6405 5300 4853 4144 5658 * 6182 29 60 4626 * 1174 844 1444 661 8815 2889 3491 V 30 2407 * * 5561 4423 3466 * 4148 4125 4925 6513 4440 2252 5556 5626 4606 6063 3580 * 4094 30 14 6679 * 1000 1000 1000 1000 8845 1000 2697 P 31 3205 * 5044 * 6305 3751 * 6631 3987 4499 6623 5068 1841 4478 3796 4402 3988 3874 5344 5802 31 14 6706 * 0 * 1020 980 8877 1000 1666 D 32 3456 * 2783 4948 6113 3159 4987 5463 4451 4961 4907 2547 3427 * 4203 3876 5629 6292 * 5649 32 0 * * * * 0 * 8890 0 1000 F 33 3607 * 6321 4826 3377 5428 * 5695 * 1315 4932 4931 3087 6436 4975 4741 5456 5464 * 5639 33 62 5414 5740 2397 304 * * 8906 1711 0 T 34 2803 * 5573 5344 6928 4927 4724 4689 4376 4377 6328 3570 4592 4843 3000 3169 2555 * 6822 6805 34 41 6814 5687 1585 585 923 1081 8893 1000 1406 S 35 3549 * 2242 3999 * 4195 5557 6991 4565 3467 * 3588 5293 4605 4479 3562 3915 3836 * 6853 35 43 5076 * 2107 381 1460 652 8884 2165 2228 P 36 3071 * 4108 4601 4605 4019 4248 4746 4606 3929 6360 3748 2679 4546 5599 3378 4296 5104 * * 36 0 * * * * * 0 8895 0 1727 D 37 2977 * 3754 3053 4733 3840 5423 4094 4721 5527 * 6448 * 5195 4021 3514 2943 4651 * 3801 37 44 6422 5748 1585 585 * 0 8894 1000 1727 Y 38 3373 * 4127 4964 3040 * 5595 4242 6945 3259 * 4639 5077 4894 3928 5621 4571 3706 3472 3208 38 16 * 6464 * * 1925 441 8881 0 2654 Q 39 4599 * 4138 3778 5155 5376 4821 4292 3139 3277 * 6412 4566 2794 4477 4695 4431 3251 5605 5635 39 60 5499 5754 2424 297 434 1945 8870 1704 2612 K 40 3462 * 3767 4138 5079 4305 4111 5192 3487 5025 6577 3391 3700 4972 3634 3824 6156 4988 5204 4178 40 30 5621 * 1994 417 556 1645 9038 1632 2276 S 41 4012 6486 4465 5411 6878 2776 5003 * 3514 3824 5334 3843 4481 5157 3214 2943 4569 5258 * 4611 41 49 4905 * 1411 681 0 * 9064 2330 1000 R 42 4167 * 4575 4206 5595 4408 3513 4047 3206 4230 4630 4113 5584 4803 4494 3884 3857 3973 5444 4381 42 29 6670 6672 1000 1000 * * 9079 1000 0 T 43 3600 * 4276 4468 6890 4096 4534 3632 3312 3636 6764 5309 3561 4497 5164 3342 3010 6596 6611 6130 43 17 6436 * 1585 585 * 0 8898 1000 1000 D 44 3965 * 2264 3352 5079 4258 6318 4720 5686 3934 6521 3844 3783 5549 3764 4625 4297 4424 * 5240 44 16 6495 * 0 * 0 * 8898 1000 1000 A 45 3391 * 3972 3453 * 3147 4768 4585 3952 3947 5003 4387 4547 5336 4353 3572 4177 6567 4308 4916 45 0 * * * * * * 9079 0 0 Q 46 3705 * 3278 3603 6731 3486 5630 4734 3907 4633 6995 4119 4769 3404 3756 3801 4381 4841 * 4340 46 82 4502 6471 1645 556 * * 9056 2934 0 M 47 3551 * 4316 3928 3497 5578 * 2473 5033 3165 4214 6848 5098 6760 5578 4340 * 2708 5527 5569 47 48 5464 6666 3543 129 0 * 9021 1759 1000 K 48 3817 * 5633 4362 3766 5070 4410 3136 3529 3537 4694 5360 5509 5113 3530 4346 4272 4211 5647 4375 48 0 * * * * 0 * 9038 0 1000 E 49 3940 * 3599 3233 6618 4150 4336 3390 3199 3830 6744 4367 4665 4968 5060 5669 4434 5546 4492 3954 49 55 5578 5948 1000 1000 * * 9042 1388 0 S 50 3456 * 6073 5478 4417 3296 6563 2722 4315 4295 * * 5343 5201 4364 3172 3527 3260 6384 4468 50 25 6822 6934 2322 322 982 1019 9051 1000 1735 M 51 3841 * 3983 5640 5762 4111 5121 1896 4566 3498 4474 6666 6060 4712 5258 6270 3950 3357 * 4918 51 37 5299 * 1371 705 925 1079 9042 1749 1676 T 52 3619 * 4160 4638 4299 4252 4710 3797 3611 4818 4379 5924 4000 3605 3692 4203 3406 4400 * 6758 52 62 4571 * 853 1164 * 0 9043 2747 1000 N 53 4035 * 3062 6141 6441 3053 3612 3819 3583 * 5746 2594 5472 4608 4114 4989 6741 4751 * 4227 53 61 4986 6644 2669 247 * 0 9043 2325 1000 G 54 4267 * 4612 5339 * 1376 6477 5461 4502 5673 6372 3946 4013 4465 6519 5096 4397 4802 4639 4269 54 80 4775 5837 2953 200 900 1107 9037 2282 1622 T 55 4075 * 4524 6596 6275 3564 5728 3407 2686 5710 5737 4132 3921 4747 3759 4792 4267 2953 6631 5534 55 70 4702 6841 2774 228 1514 622 9046 2732 2242 K 56 3805 * 4389 5881 5331 3034 6502 5204 3381 6238 5365 3810 3743 5891 2601 3623 3732 5008 * 5058 56 27 * 5735 * * 0 * 9044 0 2144 N 57 3349 * 4238 * 5287 2454 4810 6229 3133 5483 4426 3439 4694 5090 4626 3612 3995 * 6515 4244 57 46 6432 5635 1585 585 * 0 9024 1000 1401 P 58 3696 * 4970 3760 5214 2321 6579 * 6050 6218 6685 4733 2858 4623 * 3498 2688 4194 * 5213 58 7 * 7679 * * 2156 367 9002 0 2560 N 59 3475 * 5720 * 5761 3124 4846 5435 3157 5583 3000 3761 3426 5076 4203 4333 4170 4240 * 4907 59 69 4421 * 2585 263 944 1058 9021 3464 2780 V 60 4753 6648 6899 6391 * 7043 6733 5647 5546 * 632 5670 3894 6235 6781 5046 4913 4439 6622 * 60 0 * * * * * 0 9027 0 1782 K 61 5170 * 5867 6442 7046 5029 * 6591 3953 * 3220 6463 1009 5167 6558 4217 5277 4980 4182 6633 61 15 * 6633 * * 980 1020 9027 0 1782 L 62 2283 * 6435 6597 4318 3032 6603 * 5616 4992 4515 5562 2254 5041 * 2460 5262 6074 * 6561 62 98 5585 4486 569 1618 * 0 9012 1798 1647 S 63 5903 * * 4802 1564 5328 5551 4725 4411 6347 6450 * 4418 5515 6213 3470 3878 6670 3100 3515 63 30 * 5607 * * 882 1129 8915 0 3567 D 64 2506 * 3966 4455 4037 2583 * 6930 2529 5894 6612 5507 4363 4422 4392 4302 4766 * 6669 5969 64 50 5336 6707 1836 474 1181 839 8953 2331 3176 L 65 3251 * 2690 3233 6300 3120 * * 3036 4458 * 4067 4007 5363 5087 3903 5124 6447 6246 4547 65 41 6946 5663 0 * 1120 889 8956 1000 2495 G 66 4609 * 6406 4281 6478 3605 4990 3795 2528 5125 6558 4124 6432 3217 3507 3687 3555 4079 * * 66 52 4832 * 2120 377 434 1945 9001 2655 2670 V 67 * * 6527 * 4652 * * 4006 * 493 3603 * 6716 6440 * * * 4092 6078 * 67 0 * * * * 0 * 9025 0 1000 D 68 * * 3266 5075 * 4096 6631 * 4202 * * 4282 5222 5603 5641 1520 1887 * * 7456 68 0 * * * * * * 9042 0 0 L 69 3971 * 1466 2574 6491 5743 * * 4755 5577 * 7778 2726 4349 6852 3774 6699 * 6346 6632 69 0 * * * * * * 9042 0 0 A 70 3215 * 3370 1618 * 5613 6789 6526 3377 6832 5361 4223 6850 3623 5068 4247 4352 5600 * 7723 70 14 6669 * 3000 193 * * 9042 1000 0 D 71 5088 * 1988 1304 * * * * 6602 * 5576 5585 * 2194 6249 6870 6450 6681 * * 71 0 * * * * * * 9042 0 0 L 72 5098 * 6595 * * * * 886 6113 3129 3926 * * * 3444 6529 6990 3131 * * 72 0 * * * * * * 9042 0 0 D 73 2812 * 2915 2725 * 5400 * 5908 2709 5531 6249 6410 6491 4273 4684 5689 4602 * 2717 5674 73 0 * * * * * * 9042 0 0 P 74 1572 6316 2325 3826 * 6287 5539 * 4494 4365 5656 4595 5605 3703 6491 3572 * * * * 74 0 * * * * * * 9042 0 0 L 75 4864 * * * * * * 2558 * 1299 4772 * * * * * * 1503 * * 75 0 * * * * * * 9042 0 0 V 76 1846 5674 * * 6727 6669 6514 2746 * 3373 5755 * * * * 4666 4047 1698 * * 76 0 * * * * * * 9042 0 0 Q 77 1714 * 4186 3883 * 5108 5700 6588 4229 * 6346 3377 5440 3865 4271 3129 3981 5629 * 6557 77 0 * * * * * * 9042 0 0 L 78 6694 * * * 2604 * 4478 * * 6537 * * * * * * * 4926 5503 483 78 0 * * * * * * 9042 0 0 V 79 6437 * * * 6252 * * 1460 * 2698 4291 * * * * * 6675 1333 * * 79 32 5495 * 1122 888 * * 9042 1687 0 R 80 4719 * * 4275 * * 4456 * 2419 3899 6656 6680 * 3183 1318 4284 * 6577 * 5781 80 0 * * * * * * 8820 0 0 G 81 3897 * * 4469 4639 2596 4105 * 3235 * * 3983 * * 4982 1750 3525 5281 * 6252 81 0 * * * * * * 8402 0 0 F 82 * * * 5951 2347 * * 5156 * 663 5171 * * 6001 * * * 3881 * 5920 82 0 * * * * * * 8389 0 0 N 83 3740 * * 4064 * 4037 * * 2864 * 4747 3970 4639 1941 5856 2294 5366 * 5640 * 83 0 * * * * * * 8053 0 0 G 84 2431 * * * * 1828 * * 1809 * * * 3855 4105 4315 5740 * 4286 * * 84 0 * * * * * * 7788 0 0 K 85 * * * 2841 * * * * 726 * * * * 3592 2530 * * * * * 85 0 * * 0 * * * 6862 0 0 //