HHsearch 1.5 NAME c5vmdC_ FAM FILE c5vmdC_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5vmdC_.a3m DATE Sat Jul 15 08:25:00 2017 LENG 73 match states, 73 columns in multiple alignment FILT 102 out of 285 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.1 EVD 0.4871 0.7750 SEQ >ss_dssp CCTTCSSSSCSHHHHHHSSEEEEEEETTTCCCCCCBCHHHHHHTTTTSCEEEEEEETTCCTTTTTCSSSCCCC >sa_dssp EEEEEDEEEECEDCEEEECDEDBCCADEDCEDECEBDDEDBEEECEEDEDDDBEDDEEEDDDEDEDDEEECEE >ss_pred CCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCEEEHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCCC >ss_conf 9876782379942888544566046541579986896177641079977999933882982678888777619 >Consensus xxxxxxxCtxxxtxxxxxxxQxxyxCxtCxxxxxxiCxxCfxxcHxgHxvxxxxxxxxxCDCGxxxxxxxCxl >c5vmdC_ GPLGSGQCLYKISSYTSYPMHDFYRCHTCNTDRNAICVNCIKKCHQGHDVEFIRHDRFFCDCGAGTLSNPCTL >UniRef50_A2E380(74-144:229) Zinc finger in N-recognin family protein n=1 Tax=Trichomonas vaginalis RepID=A2E380_TRIVA E=2e-05 s/c=0.71 id=27% cov=96% --LRNSLCS-NLKIGTNVPAQHAWVCLTCAMgEYDGICNVCAETCHKGHKLVDKGiWNGFTCACGSKGATCQCK- >UniRef50_Q23AR8(2144-2209:2216) Putative uncharacterized protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q23AR8_TETTH E=9e-05 s/c=0.73 id=32% cov=78% --------TYKFQQNTTV---DYYTCVQCNLNW--ICQSCAFFCHKEHNTVIQIKNHlaswACCYC---VTKNKCK- >UniRef50_B7FNU3(14-81:444) Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FNU3_PHATR E=1e-10 s/c=0.99 id=28% cov=89% -------CTFAVT-GESESFQSIFICRTCSLDAKdllCVCQACAETCHEDHEgLEYVGIGPSYCDCEA-LLEGGCKI >UniRef50_C5M2Q0(101-158:1807) Putative uncharacterized protein n=1 Tax=Candida tropicalis MYA-3404 RepID=C5M2Q0_CANTT E=2e-10 s/c=1.15 id=34% cov=68% -----------------------YRCSDCGFDETCVlCSYCFNENdHLNHNVTAYTSRgnsGGICDCGdeeAFTQPLNCK- >UniRef50_A2G2F2(60-122:1171) Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2G2F2_TRIVA E=3e-08 s/c=0.95 id=28% cov=82% ------RCDFSVNSKNVVG-----FCLDClKRRDSCLCLKCFFNgNHEGHRCGVQMQLGAFCDCGNSKLFNP--- >UniRef50_Q54JV0(66-135:1580) Zinc finger, N-recognin domain-containing protein n=1 Tax=Dictyostelium discoideum RepID=Q54JV0_DICDI E=5e-07 s/c=0.79 id=29% cov=75% ----TSKCQHIPTQPEWF-----YSCKTCCNESNYYCRNCfFDGEHieKGHSISMTENSSGRvCDCG---------- >UniRef50_B3RYT0(35-109:420) Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RYT0_TRIAD E=6e-12 s/c=0.96 id=34% cov=97% GDVDDNNCTY---SKGYVKRQPLYACYTCTANKgilAGVCYACSIHCHDGHIlYELYTKRNFRCDCGNDLFSSTqCTL >UniRef50_A0DWE5(917-970:976) Chromosome undetermined scaffold_67, whole genome shotgun sequence n=3 Tax=Paramecium tetraurelia RepID=A0DWE5_PARTE E=5e-05 s/c=0.90 id=32% cov=51% -----------------------FNCKTCKKS---LCRLCSYDCHQQHQTKELYINKFVCQC----------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * G 1 * * * * * 0 * * * * * * * * * * * * * * 1 0 * * * * * * 1547 0 0 P 2 * * 2383 * * * * * * * * * 307 * * * * * * * 2 0 * * * * * * 2429 0 0 L 3 * * * * 3495 * * 3313 * 880 * * * * * * * 2403 * 3674 3 0 * * * * * * 3542 0 0 G 4 3821 * 2672 * * 2500 * * * * * * * 3556 3382 1686 * 3267 * * 4 0 * * * * * * 3663 0 0 S 5 * * 3838 3655 * * * * * * * 2013 2620 3634 * 2246 3576 3942 * * 5 0 * * * * * * 3821 0 0 G 6 * * 4277 * * 1662 * * 3290 * * 2933 * * * 1583 3936 * * * 6 0 * * * * * * 4049 0 0 Q 7 4522 * 4732 4576 * * * * 2190 2468 4531 4508 4504 2366 3594 * * 3858 * * 7 56 4724 * 0 * * * 4585 1000 0 C 8 * 0 * * * * * * * * * * * * * * * * * * 8 57 * 4689 * * * * 4997 0 0 L 9 4955 * 4825 5000 * 4974 * * * 4863 3617 * * 3835 * 2129 1136 * * * 9 100 * 3897 * * * 0 4996 0 1000 Y 10 4935 * * * 1300 * 3403 * 4589 5097 * * * 4707 * * 5004 * * 1615 10 204 * 2923 * * 0 * 5171 0 2020 K 11 3436 * 4833 5202 * * * 3271 3192 4472 * 4957 4915 * 3087 2993 2527 3963 4606 * 11 76 * 4279 * * 836 1185 5143 0 2232 I 12 * 4189 * * 2487 * * 2082 4957 3417 * 4668 3961 * * * * 2317 3313 * 12 0 * * * * 1771 500 5222 0 2162 S 13 * 4175 * * * 4019 * * 2973 * * 4895 * 3185 4969 2088 1536 * * * 13 274 * 2532 * * 1636 560 5218 0 1765 S 14 * * 4924 * 4972 3863 * 4876 2880 * * * * 3228 3189 1528 3754 * * 4077 14 52 * 4824 * * 170 3169 5318 0 2833 Y 15 5250 * 3916 5182 * 1274 * * 2597 * * 3856 5091 * 3489 4231 4913 * * 5206 15 0 * * * * 885 1126 5391 0 1461 T 16 5577 * 3563 1953 * 3486 * 4852 3041 * * 3240 * 4852 4757 4477 3172 4872 * 5415 16 38 * 5283 * * * 0 5412 0 1000 S 17 * 3354 3321 5630 4390 3422 * 5350 3568 * * 4364 4775 * 4986 2418 4733 3570 4253 4205 17 38 * 5272 * * 0 * 5342 0 1483 Y 18 3683 5522 * 4445 3037 * 4062 * * * 5379 5164 5029 5435 * 2903 * 2711 * 1833 18 400 * 2047 * * * 0 5349 0 1000 P 19 3401 5179 * * * 4499 4104 1767 4844 4089 5212 5123 1889 * * 4007 * * * * 19 109 * 3778 * * 1881 457 5031 0 3418 M 20 3497 4492 4415 2759 3931 3950 * * 5092 4914 5141 3812 5111 * 2578 3384 4172 * * 4946 20 0 * * * * 2711 239 4877 0 3362 H 21 * * * 3273 * 4785 3260 * * * * * 5001 517 * 5275 * * * * 21 0 * * * * 2622 256 5056 0 3162 D 22 4559 * 3150 2880 * 4981 3337 4517 4646 3483 * 5747 2870 4152 * 5773 3536 4343 * 4645 22 0 * * * * * 0 5112 0 3016 F 23 2977 * * * 2988 5245 * 2927 * 2944 3319 * * 5456 * * 5834 3158 3590 3018 23 0 * * * * 230 2763 5139 0 3016 Y 24 * * * * 1721 * * * * * * * * * * * * 6482 4123 671 24 21 * 6127 * * 0 * 5479 0 1000 R 25 5129 5919 * 4514 4015 * 3842 4663 2669 5468 * 4819 * 3288 2430 3975 3798 4013 * 4665 25 0 * * * * 0 * 5485 0 1000 C 26 * 0 * * * * * * * * * * * * * * * * * * 26 0 * * * * * * 5510 0 0 H 27 * * * 4202 3175 5042 4730 4820 2853 2415 6922 6907 * 4270 2539 4963 6398 6027 * 3239 27 0 * * * * * * 5510 0 0 T 28 * * 2122 3915 * * * * 6507 * * 5459 * 3330 * * 862 6798 * 6427 28 0 * * * * * * 5510 0 0 C 29 * 0 * * * * * * * * * * * * * * * * * * 29 224 2947 6143 1454 655 * * 5510 3660 0 N 30 3064 4475 5931 4791 4190 2609 * * 4011 6482 * 3346 5573 3944 5679 2482 4089 * 5385 5294 30 44 5067 * 1687 536 * 0 5491 1924 1000 T 31 5932 6791 3468 5535 5339 3773 6929 3766 3631 2612 4123 3686 4704 4907 6313 4371 3489 4253 * 5078 31 183 3185 6802 2392 305 0 * 5491 3348 1000 D 32 6470 * 1748 2801 * 5267 6236 4632 4302 * * 2585 4718 5776 6317 3657 4030 6506 * 5040 32 121 4111 5462 276 2520 0 * 5511 2466 1000 R 33 4350 6521 3201 3779 * 3884 * * 4528 * * 3120 1921 6083 4524 3093 5299 * 4949 4830 33 169 3403 5981 1585 585 * 0 5472 2924 1616 N 34 4840 6393 5163 5593 6817 * 2986 5236 3872 4822 5208 3736 * * 5306 2010 2306 4698 * 5454 34 206 3013 6731 1162 854 * 0 5445 3498 1976 A 35 3154 1567 * * * 2261 4513 4954 5986 5336 * * 6098 * * 3577 * 4393 * 3663 35 300 2489 6725 202 2934 0 * 5439 3398 2185 I 36 6379 3431 * * 6276 * * 1064 * 3170 5374 * * * * * 6125 2110 * 5453 36 186 3047 * 0 * * 0 5507 2894 1000 C 37 * 0 * * * * * * * * * * * * * * * * * * 37 0 * * * * 0 * 5507 0 1000 V 38 3634 5482 6800 3195 6492 6091 6392 4759 3843 3651 5334 4897 6902 3709 4376 3107 3778 3187 * 3947 38 0 * * * * * * 5510 0 0 N 39 3252 5468 3232 2844 5416 5724 5281 5262 4205 4619 * 4134 5045 3937 4976 3077 6250 4378 6552 3988 39 0 * * * * * * 5510 0 0 C 40 * 0 * * * * * * * * * * * * * * * * * * 40 61 4589 * 0 * * * 5510 2198 0 I 41 1915 * 6534 * 974 * * 4180 4991 6479 * * * * * 4032 6651 6721 * 4781 41 170 3166 * 0 * * * 5510 2864 0 K 42 * * 4474 2377 3887 6430 6712 3702 2555 3497 6870 3216 * 4964 3208 * 5289 4856 * 5518 42 72 4865 6131 0 * * * 5510 1984 0 K 43 3703 * 5051 5951 6017 4424 4119 4143 3795 6053 * 3003 3687 4280 4386 2825 3833 3492 * 6401 43 142 3414 * 109 3775 0 * 5485 2945 1000 C 44 * 1105 5754 3537 * 3944 * * 3778 * * 2929 * 5140 * 3012 6790 * * * 44 476 1867 7193 236 2730 * * 5504 3869 0 H 45 * * * * * * 0 * * * * * * * * * * * * * 45 48 4941 * 1000 1000 0 * 5507 1820 1000 Q 46 3520 * 5310 2594 * 6320 6558 5077 1949 4806 * 6543 * 3273 3782 5668 3971 3446 * 6340 46 0 * * * * * * 5504 0 0 G 47 * * 3087 5163 7187 796 * * 4702 6381 * 2764 * 6204 * 4356 * * * 6456 47 0 * * * * * * 5504 0 0 H 48 * * * * * * 44 * * * * * * * * * 5041 * * * 48 0 * * * * * * 5504 0 0 D 49 5196 * 2346 3167 6173 * 4782 4956 3342 6534 * 2919 5917 3458 3051 4255 4569 5802 * * 49 186 3045 * 0 * * * 5503 3074 0 V 50 6072 4337 * * 3913 * * 3651 * 3197 * 5034 * * * * 3888 1396 * 2303 50 127 4081 5320 961 1040 * * 5503 2417 0 E 51 6942 * * 3117 4551 5046 5066 4320 3329 4922 4457 5653 5631 3654 4270 2834 4451 2592 * 5470 51 15 6587 * 1585 585 0 * 5471 1000 1587 F 52 5013 4648 6223 3961 2910 * * 3247 5365 2644 4802 * 5661 * 5917 6335 5096 3507 * 2138 52 85 4372 6844 1375 703 * * 5503 2259 0 I 53 5835 5238 * 6038 2482 5918 3261 3873 3856 3867 * 6590 * 3907 4768 4422 3723 3903 5873 3120 53 60 5152 6346 583 1590 0 * 5495 1782 1000 R 54 6285 * * 4677 * 3048 4488 4730 3756 * 5511 4061 5462 4173 2533 2709 3177 4724 * 4760 54 112 3745 * 1594 580 0 * 5489 2408 1000 H 55 4582 6474 5612 3824 6356 4503 6004 4073 3376 * 4535 4319 4465 4158 3958 2671 3564 4063 5348 4525 55 50 4883 * 198 2963 * * 5496 2217 0 D 56 3974 6807 4776 3875 5378 2881 * 4370 * 6305 * 3013 * 5585 3211 2313 3343 4717 * 6429 56 73 4335 * 777 1264 * * 5496 2392 0 R 57 5032 * 5112 5222 6154 1821 4929 * 4311 6517 * 2560 6856 4157 3977 3333 3754 6361 * 4674 57 93 4008 * 1019 982 * * 5496 2900 0 F 58 3305 6771 6400 * 1801 1199 * 6206 5212 * * * * * 6605 4262 5575 * * 4998 58 49 4904 * 500 1773 * * 5496 1678 0 F 59 4681 2592 6154 * 3225 * * 4065 5029 4846 5089 4934 * 5588 3752 4578 3614 3076 * 2739 59 42 5131 * 0 * * * 5496 1901 0 C 60 * 0 * * * * * * * * * * * * * * * * * * 60 0 * * * * * * 5496 0 0 D 61 5213 * 372 4448 * * 4093 * * * * * * 5158 * 4810 5921 * * 5987 61 0 * * * * * * 5496 0 0 C 62 * 0 * * * * * * * * * * * * * * * * * * 62 83 6042 4609 1585 585 * * 5496 1000 0 G 63 * * * 5662 * 58 * * * * * * 5673 * * * * * * * 63 124 3599 * 1585 585 * 0 5148 1976 1937 A 64 1675 * 2285 * * * * * * 4458 * 2519 * 5140 * 2728 3603 * * * 64 240 3438 4039 2341 317 * 0 4878 2136 1937 G 65 4053 * 4332 4197 3448 1860 5041 * 3978 * * * 2380 * * 3976 4121 * 4022 * 65 0 * * * * 278 2513 4745 0 2464 T 66 2843 4226 * * 5413 5101 * 4862 2843 3561 * 3361 * 4194 3787 5278 2578 3672 * * 66 0 * * * * * 0 4877 0 1000 L 67 3560 2911 * * 3563 4212 * * * 1693 5119 5116 3827 4158 5349 4143 4832 4879 * * 67 91 5116 4955 1585 585 0 * 4988 1000 1000 S 68 3077 * 3457 3246 4848 5353 4243 * 2535 * * * 3052 * * 2641 3858 * 4305 * 68 82 4182 * 624 1511 * 0 4988 1569 1000 N 69 5046 3842 * * * 3509 4876 * 3550 3972 * 1913 * 4583 4227 3068 3898 3610 * * 69 41 5170 * 1585 585 0 * 4809 1000 1000 P 70 * * 4939 * * 5019 1910 * 3126 * * 3035 1796 4895 * * 4202 5138 * 5082 70 88 4074 * 1118 891 * * 4847 1364 0 C 71 * 0 * * * * * * * * * * * * * * * * * * 71 0 * * * * * * 4753 0 0 T 72 3503 * * * * * 4524 * 1572 * * 3579 * 2666 * 2953 2629 * * * 72 0 * * * * * * 4463 0 0 L 73 * * * * * * * 2217 * 349 * * * * * * * * * * 73 0 * * 0 * * * 3309 0 0 //