HHsearch 1.5 NAME c5vkyB_ FAM FILE c5vkyB_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5vkyB_.a3m DATE Sat Jul 15 08:28:40 2017 LENG 105 match states, 105 columns in multiple alignment FILT 114 out of 124 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 5.5 EVD 0.3984 -1.4039 SEQ >ss_dssp CEECCCCSCHHHHHHHHHHHHHHHCCCCSCCCHHHHHHHHHHHHHHHHCSSEEEEEEEEEECCCCCCCCCCEESSCCTTCEEEEEEEEETTTTEEEEEEE EEEEC >sa_dssp ECEBEEBBDEEDACDBACEABDDCDEEEDEDDCBDCACDCACDCAEEECEECECDBDCDDDEEEEECECECECEDECEDBCBBDCDBDBEEEECBABABA CBCCE >ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCEEEEEEEEEECCCCCEEEEEEECCCCCEEEEEEE EEEEC >ss_conf 9643278599999999998620444511477899999999999987128983699999998469706977777760883887999982689868999999 98759 >Consensus xxxkxxPlxxexlxxlixexxxxxYdxxxxxxwsxxiixxIlxxLxxlxxxxkxivxxtixqxxxgixxxxxxxWDxxxDgxxtxxxexxxxxxxxvvtV xwixx >c5vkyB_ IEIKDSPLPERKLVTLIQESYDSLKDNLSTESTSNLLIKLVLEKLEKHSSLYKYIASVTTLNANFSLKNDIGASWESKKDGIFNYKLEDKNNNECYLITI LWLHK >UniRef50_B2AE44(60-200:201) Predicted CDS Pa_4_2800 n=4 Tax=Sordariomycetes RepID=B2AE44_PODAN E=1e-10 s/c=0.48 id=22% cov=95% -----SPIPFKRLEQIASDACNSVlenvefYEHPKTAGWNETIIQKVLKALMSEatpagasSPQYKFAINSTIVQHvvptsqlnkptstgttdaeaaaaa kkqagRRGMHSATGGYWNEKTDGMWSYKWDGDAKGLDVVLMLIWIA- >UniRef50_Q7K035(83-181:189) CG14763 n=15 Tax=Drosophila RepID=Q7K035_DROME E=7e-05 s/c=0.49 id=18% cov=81% ------PLNKERVENIIKAVMNRHYNDEYmfhpkhSLHMAAQVSEEIKNRIKLDNyDRYRYIVLVTVGEFLmQGLYSMVNFLWDAEKDGFVTYSVERP-- ------------- >UniRef50_C1E890(17-121:122) Dynein light chain n=2 Tax=Micromonas RepID=C1E890_9CHLO E=9e-20 s/c=0.93 id=21% cov=95% ---EDQLVTVDEIDTLIKEeikkvVGESAFMHTKVNQWTSNVVEGCLKRLAALNKPFKFVCTVNFVQKaGAGMHTASTALWDSNVDGKHTVQWE--NNTI QCITTVYWLA- >UniRef50_Q8T1P9(132-214:217) Tcc44h21-2.10 n=5 Tax=Trypanosoma RepID=Q8T1P9_TRYCR E=4e-13 s/c=0.91 id=22% cov=38% ------------------EDDAQRYDHIKAQGWIQLICDGIMEKLLGMRRPYKYVVH------------------------------------------- ----- >UniRef50_Q4SSN9(111-204:206) Chromosome 15 SCAF14367, whole genome shotgun sequence. (Fragment) n=3 Tax=Tetraodontidae RepID=Q4SSN9_TETNG E=5e-05 s/c=0.52 id=17% cov=73% -------ILKDVLTSYLQEEKYEVEWSQKMTKTLCEVIRACMKDL--LIPRYKIVVLVHIGQlSGQSMQVSSRCLWDASSDTSASY-------------- ------ >UniRef50_A8WMJ2(26-114:120) C. briggsae CBR-DYLT-2 protein n=2 Tax=Caenorhabditis RepID=A8WMJ2_CAEBR E=0.0007 s/c=0.51 id=16% cov=71% ------------ITGMIQEVMNEklgdmiKYDENEADQASKDISSTIRERLKgnfllkvTQSSTLQVFVQTMIAeQSGSGATTAVQCVWDEDCDGFLSHR ------------------- >UniRef50_UPI0001760E4F(43-144:144) PREDICTED: similar to dynein light chain 2 n=1 Tax=Danio rerio RepID=UPI0001760E4F E=1e-12 s/c=0.73 id=25% cov=73% -------LVREKCEELAREEFEGIkYNHDRCRSVSENLRAKILDLLKKLFDRYRFVVQiVTGGKAGQSVLANFEAVWDTDFDDYF--------------- ------- >UniRef50_UPI000186E18B(65-155:157) dynein light chain Tctex-type, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186E18B E=3e-12 s/c=0.80 id=16% cov=43% -------------TVLHEELGGKVYSMDKSEEWTKTIVTNVKDSVKGLGfKRYKIIVQ------------------------------------------ ------ >UniRef50_Q22226(64-162:168) Protein T05C12.5, partially confirmed by transcript evidence n=3 Tax=Caenorhabditis RepID=Q22226_CAEEL E=1e-06 s/c=0.55 id=20% cov=52% ------------------------------------MIQTISDNLVKLNGSKKFLVHCTISAKtdNLAICTANMCSWDTTKDTAYYSEWMSK-------- ------- # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * I 1 * * * * * * * 633 * * 1493 * * * * * * * * * 1 0 * * * * * * 2300 0 0 E 2 * * * 2052 * * * * 1983 * * 983 * * * * * * * * 2 0 * * * * * * 2724 0 0 I 3 * * * * * * * 991 * 1009 * * * * * * * * * * 3 0 * * * * * * 2724 0 0 K 4 * * * 1586 * * * * 775 * * * * 3600 * * * * * * 4 0 * * * * * * 4218 0 0 D 5 * * 1908 1796 3701 * * * * * * 1658 * * * 4265 * * * * 5 0 * * * * * * 5064 0 0 S 6 2751 * * * 4357 3828 * * * 2892 4854 3824 4639 3977 * 1363 * * * * 6 0 * * * * * * 5105 0 0 P 7 4670 * * * * * * * 4716 4333 * * 288 * * * 4205 * * * 7 0 * * * * * * 5450 0 0 L 8 4690 * * * 4206 * * 1978 * 1302 * * * * * * * 2109 * 5978 8 0 * * * * * * 5813 0 0 P 9 4519 * 4118 5050 * * * 4876 4690 3971 * 4853 2126 5274 * 2417 2364 4037 * * 9 0 * * * * * * 5813 0 0 E 10 4395 * 5143 3222 4765 * * 4409 1711 * * * 4645 4107 3048 4255 3626 3731 * * 10 0 * * * * * * 5831 0 0 R 11 4906 * 2025 1240 * * * 4886 4619 * * 5557 5816 * 5636 2913 5010 * * * 11 0 * * * * * * 6373 0 0 K 12 5668 5391 4199 2152 5802 * 5352 * 1749 3548 * * * 4304 3285 5570 5115 5082 * 5728 12 0 * * * * * * 6461 0 0 L 13 * 5146 * * 4176 * * 2085 * 1096 5137 * * * * * 4926 2722 * * 13 0 * * * * * * 6485 0 0 V 14 3882 * 2902 2875 * 5524 * 4112 4920 5237 * 5588 * 3615 * 2621 2329 4080 * * 14 0 * * * * * * 6570 0 0 T 15 4013 * 4455 2344 5607 4848 * * 3479 * * 3671 * 3894 4882 3046 2443 3924 * * 15 26 5781 * 0 * * * 6647 1000 0 L 16 * * 6002 * * * * 1378 5569 1201 4090 * * * 5419 * * 4797 * 5294 16 0 * * * * * * 6645 0 0 I 17 2908 4136 * 5816 * * 6082 1549 5835 3130 5591 5145 * 4647 5508 * 4324 2807 * * 17 45 6000 6057 0 * * * 6645 1000 0 Q 18 4705 * 2891 2098 * * * * 2588 4158 * 4346 * 2799 5560 3591 3757 * * * 18 34 * 5431 * * * 0 6657 0 1000 E 19 4170 * 2675 1171 * 5827 4571 * 5519 * * 4721 * 4380 5491 3103 5568 * * 5918 19 68 5096 5871 2322 322 * 0 6627 1566 1756 S 20 2098 * 4371 3483 * * 6250 3807 5536 2160 5475 * * 4896 * 3845 5654 2706 * * 20 70 4877 6250 3367 147 1513 622 6599 1555 2265 Y 21 3013 3380 4757 4051 3242 3491 * 3332 3438 * 3881 * * * * 5941 5174 3397 * 3478 21 120 4085 5572 1910 446 1201 824 6537 2213 1955 D 22 4051 * 1996 2443 * 2782 * * 4891 * * 2246 * 5744 * 4703 4811 * * 5479 22 155 3930 4776 2445 293 * 0 6625 2181 1991 S 23 * * 4667 2225 * 5664 4972 5697 2129 * * 3753 * 4189 5596 2152 5584 4277 * * 23 175 3687 4767 2484 284 * 0 6535 2766 2446 L 24 4412 * * 4122 * 5084 5541 4020 3561 3208 * 6176 4203 3794 3874 4947 3120 2094 * * 24 255 3052 4594 2222 348 2651 250 6466 3377 2776 K 25 * * * 4406 5090 * * * 4175 5404 * 4911 * * * * 5252 5980 4930 441 25 0 * * * * * 0 6392 0 3054 D 26 6157 * 863 3486 * 6044 * * 4009 5468 6233 3284 * 5736 5864 4169 * * 4663 * 26 37 * 5316 * * 1826 478 6325 0 3054 N 27 3568 * 4273 2086 * 5123 1876 * 3666 * 6207 4820 3775 5911 5443 4634 6258 * 4901 * 27 23 * 5965 * * 2781 227 6366 0 2815 L 28 4333 * 2673 2968 6270 6306 * 4580 6032 2863 5881 2616 4329 5383 5770 3373 4446 5004 * * 28 22 6017 * 2322 322 2780 227 6394 1000 2880 S 29 4358 * 4352 3526 * 5720 4813 3776 1627 6304 * 3858 * 4863 4971 3795 4584 4090 * 4513 29 65 5960 5173 2585 263 588 1579 6446 1000 2832 T 30 2299 3817 * 4952 * 4748 * 5220 * * 4586 * 6613 4913 * 2493 3057 2132 * 5761 30 0 * * * * * 0 6423 0 2032 E 31 3823 * 3452 3336 * 4939 * * 4092 3931 * 2483 5000 3257 4175 2670 4615 6145 * * 31 24 * 5894 * * 503 1764 6393 0 2032 S 32 4428 * 3532 3933 4070 3673 4525 5309 3138 5246 6149 5705 * 2342 * 2589 4434 6366 * * 32 14 * 6667 * * 899 1108 6545 0 1588 T 33 4915 * 4175 6348 * * * 4846 6065 3134 4146 * * 4891 6177 4305 3408 5009 1217 5296 33 25 5867 * 2322 322 1045 956 6558 1000 1496 S 34 3591 4320 * * * * * 5062 * 3636 * 2968 5515 * * 1778 2333 3268 * 6280 34 0 * * * * * 0 6150 0 1000 N 35 3380 6117 4627 3890 * 4599 5531 6196 2371 * * 2483 * 3897 4310 2593 4737 6356 * * 35 0 * * * * * 0 6150 0 1000 L 36 4006 * 4496 2079 * 5887 * * 4302 3691 5851 3156 * 2946 4572 3237 3504 * * 5944 36 0 * * * * * 0 5956 0 1000 L 37 4995 4655 * * 5598 * * 1149 * 1785 5389 * * * * * 5597 3029 * * 37 0 * * * * 0 * 6020 0 1000 I 38 3266 3635 * * * * * 1675 * 3702 5332 * * * 6097 2525 4166 2675 * * 38 0 * * * * * * 6009 0 0 K 39 4264 * 2161 1651 * * 5007 * 4885 5841 * 4329 * 3367 3657 4124 5209 * * 6234 39 0 * * * * * * 6009 0 0 L 40 4484 * 3962 2971 4920 3676 6694 6442 3059 4862 6018 5703 * 4274 5425 2292 3040 6676 * 4982 40 0 * * * * * * 6009 0 0 V 41 5657 3438 * * * * * 1012 * 3688 * * * * * 6292 3688 2158 * * 41 0 * * * * * * 6009 0 0 L 42 6620 6379 * 6490 * 5622 * 4514 3387 950 3759 5004 * * 3580 4943 4362 5661 * * 42 0 * * * * * * 5998 0 0 E 43 4727 * 3063 2205 * 6206 5726 6867 2050 * * 3607 * 3831 4482 4055 3904 5701 * * 43 0 * * * * * * 5998 0 0 K 44 2881 * 4570 3261 * 4176 5506 6398 2624 5483 * 4425 * 3026 2542 4346 4515 * * 6642 44 0 * * * * * * 5998 0 0 L 45 * * * * * * * 3248 * 414 5367 * * * * * 5646 3320 * * 45 37 6549 6120 1000 1000 * * 5995 1000 0 E 46 3679 5345 5618 6477 * 5302 5940 3252 1531 6259 6492 3523 * 4703 5811 3508 4510 3759 * * 46 48 4933 * 2807 222 * 0 5973 1000 1000 K 47 3359 * 4471 2400 * 4925 * * 1803 5307 * 5204 * 4168 4142 3406 3861 5597 * * 47 55 4743 * 2458 290 0 * 5954 2212 1000 H 48 3472 * 4463 4318 4620 * 4453 5599 3509 1221 4376 6795 * 3700 5251 5732 6444 * * * 48 61 4602 * 3035 188 * * 5976 2345 0 S 49 5403 5833 4902 4128 5032 2690 * 6453 4291 * * 2903 5581 4941 5227 1711 3805 5082 * * 49 365 2162 * 966 1035 * * 5842 4175 0 S 50 5933 * 4063 5724 6451 5242 * * 1625 * * 5515 2899 4602 4822 1786 5613 * * * 50 26 5819 * 3134 174 * * 5730 1430 0 L 51 4400 * 5672 * 6866 5312 5588 * 3237 4798 * 5400 1846 4064 1929 3729 4764 * * * 51 29 5650 * 3154 172 * * 5730 1450 0 Y 52 * * * * 1786 * 2968 * 5891 5648 * * * * * * * * * 874 52 0 * * * * * * 4103 0 0 K 53 * * * * * * * * 147 * * * * 6233 3826 6224 * * * * 53 0 * * * * * * 4099 0 0 Y 54 * * * * 1620 * 5308 3318 * 3998 * * * * * * * 4901 5074 1240 54 0 * * * * * * 4099 0 0 I 55 5385 5009 * * 4450 6707 * 1139 * 4037 5082 6351 * * * * 5866 1664 * * 55 19 6272 * 2585 263 * * 4099 1000 0 A 56 4479 3431 * * * * * 3352 * * * * * * * 5299 4622 518 * * 56 0 * * * * * * 4098 0 0 S 57 * * * 6688 * * 3065 6577 * 4321 * 2441 * 1961 * 2729 2194 * * * 57 20 6195 * 0 * * * 4098 1000 0 V 58 3196 1767 * * 6600 * * 5431 * 6227 * * * * * 3127 5002 1365 * 5930 58 0 * * * * * * 4102 0 0 T 59 5923 * * 6100 6442 * 6598 3646 * 3463 4536 5203 * * 5832 3524 1121 3190 * 4947 59 0 * * * * * * 5257 0 0 T 60 6066 * 5692 5887 4990 5876 * 1036 4196 2591 * * * 5585 5278 5218 4928 3546 * * 60 86 4116 * 1945 434 * * 5246 2495 0 L 61 4620 * * * 6370 2924 * 2967 * 2266 2914 * * 3906 6435 5591 3937 2453 * * 61 229 2766 * 1581 587 * * 5246 3855 0 N 62 5591 * 4322 2563 * * 6066 * 4786 * * 3936 5794 888 5887 4729 5033 * * * 62 333 2278 * 938 1065 * * 5246 3872 0 A 63 3229 * * 5700 5050 * 4683 * 1677 * 6536 3242 * 4579 4854 3146 2594 5585 * * 63 451 1897 * 2340 317 * * 5246 4216 0 N 64 * * 3663 6450 * 1386 * * 6568 5355 6339 1669 * 5979 3714 4009 6494 * * * 64 255 2625 * 2221 348 * * 5246 3834 0 F 65 1821 4485 4734 5979 4595 5435 * * 5477 3737 * 5523 4356 2251 3893 4399 6075 4815 * 6487 65 40 5186 * 1596 579 * * 5246 1929 0 S 66 4335 6639 5585 4212 * 791 * 6487 * 6300 * 5278 6443 * * 2564 4120 * * * 66 107 3800 * 1021 979 * * 5246 2578 0 L 67 4526 * * * 3975 * * 1677 * 1947 2714 * * * * * 5477 2866 * 6799 67 0 * * * * * * 5246 0 0 K 68 5340 3794 3916 4086 5996 5979 2106 5090 3880 5145 * 4191 * 4214 4430 3466 3166 * * 4978 68 0 * * * * * * 5246 0 0 N 69 3103 * * * 4997 * 4836 3588 * 4689 5170 4837 * * * 1959 2323 2510 * * 69 23 5979 * 1585 585 * * 5246 1000 0 D 70 1371 * 4397 * 5149 3345 4673 5415 6366 * 6125 5270 * 4246 * 2216 6004 6445 * 5086 70 0 * * * * * * 5248 0 0 I 71 3743 6277 * * 2774 6455 6446 3321 * 5465 * 4419 * 4808 * 1546 3345 3740 * 5479 71 0 * * * * * * 5248 0 0 G 72 4239 6338 * 5883 * 1816 * 5378 5439 * 4295 4952 * 4614 2639 2569 3703 4143 * * 72 0 * * * * * * 5248 0 0 A 73 1616 1636 * 6448 4075 3774 * * * * * 5798 * * * 3134 3934 * 6537 * 73 0 * * * * * * 5248 0 0 S 74 5898 5694 * * 3083 * 4722 6019 * 1822 6468 * * * 6358 2714 * 3077 6409 2297 74 0 * * * * * * 5366 0 0 W 75 * * * * 5501 * * * * * * * * 5736 * * * * 60 * 75 0 * * * * * * 5370 0 0 E 76 * 5850 485 4203 * * * * * * * 2358 * * * 5726 * * * * 76 19 6285 * 0 * * * 5370 1000 0 S 77 3395 4960 4439 2931 * 5004 7112 * 4921 5556 * 4182 2665 3547 * 3345 2745 4129 * * 77 0 * * * * * * 5370 0 0 K 78 4549 * 3939 2464 * 6714 6032 6807 2399 6078 5817 2656 * 4538 4640 4425 2996 4598 * * 78 32 * 5524 * * * * 5370 0 0 K 79 * 4964 5823 * 4887 * 6236 * 2035 6179 6923 3941 * 6398 2737 3447 1797 5025 * * 79 0 * * * * 0 * 5302 0 1000 D 80 * * 0 * * * * * * * * * * * * * * * * * 80 0 * * * * * * 5370 0 0 G 81 6482 5999 4131 * * 584 * * * 6858 * 3702 * 6310 5451 3817 4124 * * * 81 0 * * * * * * 5429 0 0 I 82 4046 4303 * * 2866 6001 * 4286 5137 3695 3291 6392 * 7561 * 2705 5470 5559 4679 2161 82 0 * * * * * * 5469 0 0 F 83 3028 3373 * * 3021 6127 4672 4048 * 2863 * * * 6065 * 4715 4344 2657 4138 3497 83 0 * * * * * * 5627 0 0 N 84 4770 4908 6436 * * * 4258 4768 6436 * 6418 4201 * 4433 * 1907 1551 3742 * 5450 84 56 * 4708 * * * * 5557 0 0 Y 85 3858 5705 5319 5372 4406 5450 4120 3733 * 4192 * * * 5031 * 5197 5959 1980 * 1847 85 17 * 6375 * * 1469 646 5859 0 2034 K 86 * 2937 6072 5386 * * * * 1562 5335 * 5621 * 2751 2758 3777 4422 5503 * 6845 86 37 * 5288 * * 1611 572 5518 0 1964 L 87 * 5237 * * 4329 * 5694 3784 5168 3865 6326 * * 6052 5314 * * 2510 1605 2488 87 80 * 4205 * * 1057 946 5323 0 2514 E 88 * * 3890 1177 * * * * 4842 * 5019 * 2517 5149 * 2632 4827 * * 5320 88 316 4017 2889 765 1281 1547 604 5384 2123 3397 D 89 4729 * 3489 3841 4481 3225 * 4095 5609 5786 * 2870 * 4601 4417 3277 2307 5348 * * 89 111 3758 * 454 1889 1347 720 5346 2099 3790 K 90 4192 * 4506 1557 * * * * 2360 * * 2807 3769 3711 4203 5670 * * * * 90 97 * 3943 * * 0 * 5772 0 3004 N 91 4514 * 2275 3650 * 2654 5354 * 5811 * * 1460 * 5668 5321 5012 * * * 5083 91 145 * 3389 * * * 0 5606 0 2089 N 92 3406 5006 2702 4265 * 3635 4990 * 2350 * 4964 3217 4918 4930 5898 4548 3385 * * * 92 44 * 5045 * * 1269 774 5424 0 3184 N 93 3052 * * * * 2456 4171 * 3375 * * 2896 * * 4237 2358 2870 5262 * * 93 0 * * * * 1311 744 5379 0 2845 E 94 * * 5837 4208 4640 3811 * 2603 5177 1777 2855 * * * 4380 4182 * 3445 * * 94 100 4504 5465 0 * 0 * 5461 1450 2150 C 95 5367 5194 2214 5259 3137 * 3238 2998 * * * 5188 * 3794 * * 4259 2865 * 3778 95 38 5256 * 0 * 0 * 5517 1000 1000 Y 96 3346 1674 * * * * 4244 3313 * 3251 * * * * * 3704 5604 2408 * 4506 96 34 5411 * 0 * * * 5540 1000 0 L 97 * * * * * * * 2123 * 1897 5194 * * * * * * 1166 * 5118 97 0 * * * * * * 5540 0 0 I 98 2937 * * * * 5033 * 2727 * 3558 * * * * * * 3583 945 * * 98 40 5201 * 0 * * * 5540 1000 0 T 99 3953 5599 * * 5265 5201 * * * * 4530 2989 * * * 1977 1374 4249 * * 99 0 * * * * * * 5540 0 0 I 100 * * * * * * * 1594 * 4530 * * * * * * * 677 * * 100 0 * * * * * * 5540 0 0 L 101 4476 * * * 2728 * * 3295 * 5192 5134 * * * * * 4085 2862 * 1152 101 0 * * * * * * 5530 0 0 W 102 2366 * * * 5184 3204 * * * * * * * * * * * * 578 * 102 0 * * * * * * 5146 0 0 L 103 * * * * 4986 * * 1288 * 1878 * * * * * * * 1801 * * 103 0 * * * * * * 4895 0 0 H 104 1383 * * * * * 3358 * * * * * * * * 1904 * * * 1990 104 0 * * * * * * 4806 0 0 K 105 * * * * * * * * 284 * * * * * 2482 * * * * * 105 0 * * 0 * * * 2640 0 0 //