HHsearch 1.5 NAME c5ujgA_ FAM FILE c5ujgA_ COM /bmm/www/servers/phyre2/HH/hhmake -i c5ujgA_.a3m DATE Sat Jan 27 08:25:53 2018 LENG 26 match states, 26 columns in multiple alignment FILT 1 out of 5 sequences passed filter (-id 90 -cov 0 -qid 0 -qsc -20.00 -diff 100) NEFF 1.0 EVD 0.5586 5.1732 SEQ >ss_dssp CCSSSCSSCSSSCEECCSSSCEEC-- >sa_dssp DEEEEEECEEEEECCEEEECDCCE-- >ss_pred CCCCCEECCCCHHHHHHCCCCCCCCC >ss_conf 96773322772135421014432259 >Consensus cpdpvytcrpgqtccrglhgygccxx >c5ujgA_ CPDPVYTCRPGQTCCRGLHGYGCCXX # NULL 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 HMM A C D E F G H I K L M N P Q R S T V W Y M->M M->I M->D I->M I->I D->M D->D Neff Neff_I Neff_D 0 * * 0 * 0 * * * * C 1 * 0 * * * * * * * * * * * * * * * * * * 1 0 * * * * * * 1000 0 0 P 2 * * * * * * * * * * * * 0 * * * * * * * 2 0 * * * * * * 1000 0 0 D 3 * * 0 * * * * * * * * * * * * * * * * * 3 0 * * * * * * 1000 0 0 P 4 * * * * * * * * * * * * 0 * * * * * * * 4 0 * * * * * * 1000 0 0 V 5 * * * * * * * * * * * * * * * * * 0 * * 5 0 * * * * * * 1000 0 0 Y 6 * * * * * * * * * * * * * * * * * * * 0 6 0 * * * * * * 1000 0 0 T 7 * * * * * * * * * * * * * * * * 0 * * * 7 0 * * * * * * 1000 0 0 C 8 * 0 * * * * * * * * * * * * * * * * * * 8 0 * * * * * * 1000 0 0 R 9 * * * * * * * * * * * * * * 0 * * * * * 9 0 * * * * * * 1000 0 0 P 10 * * * * * * * * * * * * 0 * * * * * * * 10 0 * * * * * * 1000 0 0 G 11 * * * * * 0 * * * * * * * * * * * * * * 11 0 * * * * * * 1000 0 0 Q 12 * * * * * * * * * * * * * 0 * * * * * * 12 0 * * * * * * 1000 0 0 T 13 * * * * * * * * * * * * * * * * 0 * * * 13 0 * * * * * * 1000 0 0 C 14 * 0 * * * * * * * * * * * * * * * * * * 14 0 * * * * * * 1000 0 0 C 15 * 0 * * * * * * * * * * * * * * * * * * 15 0 * * * * * * 1000 0 0 R 16 * * * * * * * * * * * * * * 0 * * * * * 16 0 * * * * * * 1000 0 0 G 17 * * * * * 0 * * * * * * * * * * * * * * 17 0 * * * * * * 1000 0 0 L 18 * * * * * * * * * 0 * * * * * * * * * * 18 0 * * * * * * 1000 0 0 H 19 * * * * * * 0 * * * * * * * * * * * * * 19 0 * * * * * * 1000 0 0 G 20 * * * * * 0 * * * * * * * * * * * * * * 20 0 * * * * * * 1000 0 0 Y 21 * * * * * * * * * * * * * * * * * * * 0 21 0 * * * * * * 1000 0 0 G 22 * * * * * 0 * * * * * * * * * * * * * * 22 0 * * * * * * 1000 0 0 C 23 * 0 * * * * * * * * * * * * * * * * * * 23 0 * * * * * * 1000 0 0 C 24 * 0 * * * * * * * * * * * * * * * * * * 24 0 * * * * * * 1000 0 0 X 25 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 25 * * * * * * * 1000 0 0 X 26 3706 5728 4211 4064 4839 3729 4763 4308 4069 3323 5509 4640 4464 4937 4285 4423 3815 3783 6325 4665 26 0 * * 0 * * * 1000 0 0 //